RNA–Protein interactions for RNA: ENST00000564587.5

COMMD4-210, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 588 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-210ENST00000564587 TRPT1Q86TN4 253 aaKnown RBP11.47□□□□□ -0.57
COMMD4-210ENST00000564587 TMEM256Q8N2U0 113 aa11.47□□□□□ -0.57
COMMD4-210ENST00000564587 HIST1H2BLQ99880 126 aa11.47□□□□□ -0.57
COMMD4-210ENST00000564587 TP53TG3Q9ULZ0 132 aa11.47□□□□□ -0.57
COMMD4-210ENST00000564587 AGRNO00468 2067 aa11.47□□□□□ -0.57
COMMD4-210ENST00000564587 MUC21A0A0G2JKD1 596 aa11.46□□□□□ -0.57
COMMD4-210ENST00000564587 MUC21A0A140T8X8 626 aa11.46□□□□□ -0.57
COMMD4-210ENST00000564587 IFITM10A6NMD0 228 aa11.46□□□□□ -0.57
COMMD4-210ENST00000564587 NXPH4O95158 308 aa11.46□□□□□ -0.57
COMMD4-210ENST00000564587 FABP4P15090 132 aa11.46□□□□□ -0.57
COMMD4-210ENST00000564587 SSTP61278 116 aa11.46□□□□□ -0.57
COMMD4-210ENST00000564587 MRPL51Q4U2R6 128 aaKnown RBP11.46□□□□□ -0.57
COMMD4-210ENST00000564587 AMN1Q8IY45 258 aa11.46□□□□□ -0.57
COMMD4-210ENST00000564587 SYT8Q8NBV8 401 aa11.46□□□□□ -0.57
COMMD4-210ENST00000564587 IGHV3-16A0A0C4DH30 117 aa11.45□□□□□ -0.58
COMMD4-210ENST00000564587 RBMY1BA6NDE4 496 aaKnown RBP11.45□□□□□ -0.58
COMMD4-210ENST00000564587 RBMY1EA6NEQ0 496 aaKnown RBP11.45□□□□□ -0.58
COMMD4-210ENST00000564587 CRXO43186 299 aaPredicted RBP11.45□□□□□ -0.58
COMMD4-210ENST00000564587 RBMY1DP0C7P1 496 aaKnown RBP11.45□□□□□ -0.58
COMMD4-210ENST00000564587 SMIM6P0DI80 62 aa11.45□□□□□ -0.58
COMMD4-210ENST00000564587 RAB4AP20338 218 aa11.45□□□□□ -0.58
COMMD4-210ENST00000564587 CKS2P33552 79 aa11.45□□□□□ -0.58
COMMD4-210ENST00000564587 ZNF124Q15973 351 aa11.45□□□□□ -0.58
COMMD4-210ENST00000564587 CHCHD1Q96BP2 118 aaKnown RBP11.45□□□□□ -0.58
COMMD4-210ENST00000564587 C9orf85Q96MD7 179 aa11.45□□□□□ -0.58
COMMD4-210ENST00000564587 ZNF747Q9BV97 191 aa11.45□□□□□ -0.58
COMMD4-210ENST00000564587 MSRB1Q9NZV6 116 aa11.45□□□□□ -0.58
COMMD4-210ENST00000564587 TIMM8BQ9Y5J9 83 aaPredicted RBP11.45□□□□□ -0.58
COMMD4-210ENST00000564587 PMCHP20382 165 aa11.44□□□□□ -0.58
COMMD4-210ENST00000564587 MORN3Q6PF18 240 aaPredicted RBP11.44□□□□□ -0.58
COMMD4-210ENST00000564587 WFDC9Q8NEX5 89 aa11.44□□□□□ -0.58
COMMD4-210ENST00000564587 OR10D4PQ8NGN7 298 aa11.44□□□□□ -0.58
COMMD4-210ENST00000564587 PRELID3AQ96N28 172 aa11.44□□□□□ -0.58
COMMD4-210ENST00000564587 AP1S3Q96PC3 154 aa11.44□□□□□ -0.58
COMMD4-210ENST00000564587 SAMD10Q9BYL1 202 aa11.44□□□□□ -0.58
COMMD4-210ENST00000564587 CBY3A6NI87 242 aa11.43□□□□□ -0.58
COMMD4-210ENST00000564587 D6R8Y8 96 aa11.43□□□□□ -0.58
COMMD4-210ENST00000564587 M0R381 172 aa11.43□□□□□ -0.58
COMMD4-210ENST00000564587 HSBP1O75506 76 aa11.43□□□□□ -0.58
COMMD4-210ENST00000564587 FXYD7P58549 80 aa11.43□□□□□ -0.58
COMMD4-210ENST00000564587 Q8N1Y9 231 aa11.43□□□□□ -0.58
COMMD4-210ENST00000564587 MRAP2Q96G30 205 aa11.43□□□□□ -0.58
COMMD4-210ENST00000564587 RNF185Q96GF1 192 aa11.43□□□□□ -0.58
COMMD4-210ENST00000564587 C1QTNF4Q9BXJ3 329 aa11.43□□□□□ -0.58
COMMD4-210ENST00000564587 DPH3P1Q9H4G8 78 aa11.43□□□□□ -0.58
COMMD4-210ENST00000564587 EVI2AP22794 236 aa11.42□□□□□ -0.58
COMMD4-210ENST00000564587 LINC00310P59036 64 aa11.42□□□□□ -0.58
COMMD4-210ENST00000564587 IQCJQ1A5X6 159 aa11.42□□□□□ -0.58
COMMD4-210ENST00000564587 KRTAP24-1Q3LI83 254 aa11.42□□□□□ -0.58
COMMD4-210ENST00000564587 PIK3CD-AS1Q5SR53 167 aa11.42□□□□□ -0.58
COMMD4-210ENST00000564587 GTSCR1Q86UQ5 136 aa11.42□□□□□ -0.58
COMMD4-210ENST00000564587 NIT1Q86X76 327 aa11.42□□□□□ -0.58
COMMD4-210ENST00000564587 TMEM158Q8WZ71 300 aa11.42□□□□□ -0.58
COMMD4-210ENST00000564587 C19orf73Q9NVV2 129 aa11.42□□□□□ -0.58
COMMD4-210ENST00000564587 NUPR1O60356 82 aa11.41□□□□□ -0.58
COMMD4-210ENST00000564587 PPP1R17O96001 155 aa11.41□□□□□ -0.58
COMMD4-210ENST00000564587 LINC00614P0C842 121 aa11.41□□□□□ -0.58
COMMD4-210ENST00000564587 SMIM17P0DL12 118 aa11.41□□□□□ -0.58
COMMD4-210ENST00000564587 ZNF415Q09FC8 603 aa11.41□□□□□ -0.58
COMMD4-210ENST00000564587 LINC00518Q8N0U6 118 aa11.41□□□□□ -0.58
COMMD4-210ENST00000564587 PTH2Q96A98 100 aa11.41□□□□□ -0.58
COMMD4-210ENST00000564587 RCHY1Q96PM5 261 aa11.41□□□□□ -0.58
COMMD4-210ENST00000564587 LINC01587Q99440 93 aa11.41□□□□□ -0.58
COMMD4-210ENST00000564587 AMTP48728 403 aa11.4□□□□□ -0.58
COMMD4-210ENST00000564587 RNASEKQ6P5S7 137 aaKnown RBP11.4□□□□□ -0.58
COMMD4-210ENST00000564587 SHISA2Q6UWI4 295 aa11.4□□□□□ -0.58
COMMD4-210ENST00000564587 PRSS3P2Q8NHM4 247 aa11.4□□□□□ -0.58
COMMD4-210ENST00000564587 SPXQ9BT56 116 aa11.4□□□□□ -0.58
COMMD4-210ENST00000564587 GSN-AS1Q9NRJ2 163 aa11.4□□□□□ -0.58
COMMD4-210ENST00000564587 WIPF1O43516 503 aa11.39□□□□□ -0.59
COMMD4-210ENST00000564587 RBMY1A1P0DJD3 496 aaKnown RBP11.39□□□□□ -0.59
COMMD4-210ENST00000564587 RBMY1CP0DJD4 496 aa11.39□□□□□ -0.59
COMMD4-210ENST00000564587 RBMY1FQ15415 496 aaKnown RBP11.39□□□□□ -0.59
COMMD4-210ENST00000564587 FA2HQ7L5A8 372 aa11.39□□□□□ -0.59
COMMD4-210ENST00000564587 TMEM208Q9BTX3 173 aa11.39□□□□□ -0.59
COMMD4-210ENST00000564587 NDUFAF3Q9BU61 184 aa11.39□□□□□ -0.59
COMMD4-210ENST00000564587 MAP1LC3AQ9H492 121 aa11.39□□□□□ -0.59
COMMD4-210ENST00000564587 MDFICQ9P1T7 246 aa11.39□□□□□ -0.59
COMMD4-210ENST00000564587 GOLT1BQ9Y3E0 138 aa11.39□□□□□ -0.59
COMMD4-210ENST00000564587 ATRQ13535 2644 aa11.38□□□□□ -0.59
COMMD4-210ENST00000564587 DEFB125Q8N687 156 aa11.38□□□□□ -0.59
COMMD4-210ENST00000564587 POM121L12Q8N7R1 296 aa11.38□□□□□ -0.59
COMMD4-210ENST00000564587 C3orf56Q8N813 242 aa11.38□□□□□ -0.59
COMMD4-210ENST00000564587 XCL2Q9UBD3 114 aa11.38□□□□□ -0.59
COMMD4-210ENST00000564587 PRSS47A8MTI9 375 aa11.37□□□□□ -0.59
COMMD4-210ENST00000564587 TNFRSF6BO95407 300 aa11.37□□□□□ -0.59
COMMD4-210ENST00000564587 PRR31Q5SQ13 230 aa11.37□□□□□ -0.59
COMMD4-210ENST00000564587 C12orf54Q6X4T0 127 aa11.37□□□□□ -0.59
COMMD4-210ENST00000564587 C14orf178Q8N769 122 aaPredicted RBP11.37□□□□□ -0.59
COMMD4-210ENST00000564587 C12orf57Q99622 126 aa11.37□□□□□ -0.59
COMMD4-210ENST00000564587 NXT2Q9NPJ8 142 aaKnown RBP11.37□□□□□ -0.59
COMMD4-210ENST00000564587 AP5S1Q9NUS5 200 aa11.37□□□□□ -0.59
COMMD4-210ENST00000564587 CUBNO60494 3623 aa11.36□□□□□ -0.59
COMMD4-210ENST00000564587 M0R2P5 195 aa11.36□□□□□ -0.59
COMMD4-210ENST00000564587 NPYP01303 97 aa11.36□□□□□ -0.59
COMMD4-210ENST00000564587 JOSD1Q15040 202 aaPredicted RBP11.36□□□□□ -0.59
COMMD4-210ENST00000564587 ZNF876PQ49A33 203 aa11.35□□□□□ -0.59
COMMD4-210ENST00000564587 URB1-AS1Q96HZ7 61 aa11.35□□□□□ -0.59
COMMD4-210ENST00000564587 C20orf78Q9BR46 151 aa11.35□□□□□ -0.59
COMMD4-210ENST00000564587 ZMAT5Q9UDW3 170 aaKnown RBP11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 103.8 ms