RNA–Protein interactions for RNA: ENST00000564582.2

CHD9-210, Transcript of chromodomain helicase DNA binding protein 9, human

TSL 3

Gene CHD9, Length 968 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHD9-210	ENST00000564582	VCY	O14598	125 aa		4.22	□□□□□ -1.73
CHD9-210	ENST00000564582	OVOL1	O14753	267 aa		4.22	□□□□□ -1.73
CHD9-210	ENST00000564582	MRPS12	O15235	138 aa	Known RBP	4.22	□□□□□ -1.73
CHD9-210	ENST00000564582	LEPROT	O15243	131 aa		4.22	□□□□□ -1.73
CHD9-210	ENST00000564582	BCE1	O60756	84 aa		4.22	□□□□□ -1.73
CHD9-210	ENST00000564582	IGLV2-23	P01705	113 aa		4.22	□□□□□ -1.73
CHD9-210	ENST00000564582	IGHV1-69	P01742	117 aa		4.22	□□□□□ -1.73
CHD9-210	ENST00000564582	EBI3	Q14213	229 aa		4.22	□□□□□ -1.73
CHD9-210	ENST00000564582		Q1RN00	199 aa		4.22	□□□□□ -1.73
CHD9-210	ENST00000564582	S100A7L2	Q5SY68	101 aa		4.22	□□□□□ -1.73
CHD9-210	ENST00000564582	ZFP2	Q6ZN57	461 aa		4.22	□□□□□ -1.73
CHD9-210	ENST00000564582	DAND5	Q8N907	189 aa		4.22	□□□□□ -1.73
CHD9-210	ENST00000564582	ODF3	Q96PU9	254 aa		4.22	□□□□□ -1.73
CHD9-210	ENST00000564582	LINC01587	Q99440	93 aa		4.22	□□□□□ -1.73
CHD9-210	ENST00000564582	RPP25	Q9BUL9	199 aa	Known RBP	4.22	□□□□□ -1.73
CHD9-210	ENST00000564582	C21orf62	Q9NYP8	219 aa		4.22	□□□□□ -1.73
CHD9-210	ENST00000564582	PTPRB	P23467	1997 aa		4.22	□□□□□ -1.73
CHD9-210	ENST00000564582	PRAC2	D3DTV9	90 aa		4.21	□□□□□ -1.74
CHD9-210	ENST00000564582	C16orf97	H3BN30	126 aa		4.21	□□□□□ -1.74
CHD9-210	ENST00000564582		J3QQQ9	107 aa		4.21	□□□□□ -1.74
CHD9-210	ENST00000564582	NDUFB3	O43676	98 aa		4.21	□□□□□ -1.74
CHD9-210	ENST00000564582	TIMM17B	O60830	172 aa		4.21	□□□□□ -1.74
CHD9-210	ENST00000564582	IGHV1-2	P23083	117 aa		4.21	□□□□□ -1.74
CHD9-210	ENST00000564582	HERVK_113	P63121	156 aa		4.21	□□□□□ -1.74
CHD9-210	ENST00000564582	CCL8	P80075	99 aa		4.21	□□□□□ -1.74
CHD9-210	ENST00000564582	MRPS36	P82909	103 aa	Known RBP	4.21	□□□□□ -1.74
CHD9-210	ENST00000564582	ZNF56	Q15929	161 aa		4.21	□□□□□ -1.74
CHD9-210	ENST00000564582	HES3	Q5TGS1	186 aa		4.21	□□□□□ -1.74
CHD9-210	ENST00000564582	FAM222A	Q5U5X8	452 aa		4.21	□□□□□ -1.74
CHD9-210	ENST00000564582	C2orf66	Q6UXQ4	117 aa		4.21	□□□□□ -1.74
CHD9-210	ENST00000564582	ZNRF1	Q8ND25	227 aa		4.21	□□□□□ -1.74
CHD9-210	ENST00000564582	TMEM263	Q8WUH6	116 aa	Known RBP	4.21	□□□□□ -1.74
CHD9-210	ENST00000564582	BAALC	Q8WXS3	180 aa		4.21	□□□□□ -1.74
CHD9-210	ENST00000564582	LINC00477	Q96M19	166 aa		4.21	□□□□□ -1.74
CHD9-210	ENST00000564582	GAFA1	Q96PS6	74 aa		4.21	□□□□□ -1.74
CHD9-210	ENST00000564582	METTL26	Q96S19	204 aa		4.21	□□□□□ -1.74
CHD9-210	ENST00000564582	KAAG1	Q9UBP8	84 aa		4.21	□□□□□ -1.74
CHD9-210	ENST00000564582	PCNX2	A6NKB5	2137 aa		4.21	□□□□□ -1.74
CHD9-210	ENST00000564582	FER1L5	A0AVI2	2057 aa		4.2	□□□□□ -1.74
CHD9-210	ENST00000564582	DIDO1	Q9BTC0	2240 aa	Known RBP	4.2	□□□□□ -1.74
CHD9-210	ENST00000564582	TRAV17	A0A0B4J275	112 aa		4.2	□□□□□ -1.74
CHD9-210	ENST00000564582	NDUFC2	O95298	119 aa		4.2	□□□□□ -1.74
CHD9-210	ENST00000564582	IGKV1-17	P01599	117 aa		4.2	□□□□□ -1.74
CHD9-210	ENST00000564582	ZNF883	P0CG24	379 aa		4.2	□□□□□ -1.74
CHD9-210	ENST00000564582	MAGEA5	P43359	124 aa		4.2	□□□□□ -1.74
CHD9-210	ENST00000564582	CIRBP	Q14011	172 aa	Known RBP	4.2	□□□□□ -1.74
CHD9-210	ENST00000564582	RHOH	Q15669	191 aa		4.2	□□□□□ -1.74
CHD9-210	ENST00000564582	TMEM155	Q4W5P6	130 aa		4.2	□□□□□ -1.74
CHD9-210	ENST00000564582	SDIM1	Q6ZPB5	146 aa		4.2	□□□□□ -1.74
CHD9-210	ENST00000564582	FAM216B	Q8N7L0	139 aa		4.2	□□□□□ -1.74
CHD9-210	ENST00000564582	POM121L12	Q8N7R1	296 aa		4.2	□□□□□ -1.74
CHD9-210	ENST00000564582	SAP25	Q8TEE9	199 aa		4.2	□□□□□ -1.74
CHD9-210	ENST00000564582	DCTN5	Q9BTE1	182 aa		4.2	□□□□□ -1.74
CHD9-210	ENST00000564582	SELENOK	Q9Y6D0	94 aa		4.2	□□□□□ -1.74
CHD9-210	ENST00000564582	CNTRL	Q7Z7A1	2325 aa		4.2	□□□□□ -1.74
CHD9-210	ENST00000564582	TET2	Q6N021	2002 aa	Predicted RBP	4.19	□□□□□ -1.74
CHD9-210	ENST00000564582	MYO9B	Q13459	2157 aa		4.19	□□□□□ -1.74
CHD9-210	ENST00000564582	TRAV21	A0A0B4J279	112 aa		4.19	□□□□□ -1.74
CHD9-210	ENST00000564582	OOSP1	A8MZH6	123 aa		4.19	□□□□□ -1.74
CHD9-210	ENST00000564582	LST1	O00453	97 aa		4.19	□□□□□ -1.74
CHD9-210	ENST00000564582	CRYGD	P07320	174 aa		4.19	□□□□□ -1.74
CHD9-210	ENST00000564582	LINC00694	P0DN24	101 aa		4.19	□□□□□ -1.74
CHD9-210	ENST00000564582	MT3	P25713	68 aa		4.19	□□□□□ -1.74
CHD9-210	ENST00000564582	CNTFR	P26992	372 aa		4.19	□□□□□ -1.74
CHD9-210	ENST00000564582	HIST2H2BC	Q6DN03	193 aa		4.19	□□□□□ -1.74
CHD9-210	ENST00000564582	HIST2H2BD	Q6DRA6	164 aa		4.19	□□□□□ -1.74
CHD9-210	ENST00000564582	HCP5	Q6MZN7	132 aa		4.19	□□□□□ -1.74
CHD9-210	ENST00000564582	GUSBP11	Q6P575	273 aa		4.19	□□□□□ -1.74
CHD9-210	ENST00000564582	FAM19A5	Q7Z5A7	132 aa	Predicted RBP	4.19	□□□□□ -1.74
CHD9-210	ENST00000564582	C5orf38	Q86SI9	138 aa		4.19	□□□□□ -1.74
CHD9-210	ENST00000564582	NUP37	Q8NFH4	326 aa		4.19	□□□□□ -1.74
CHD9-210	ENST00000564582	DUX3	Q96PT4	197 aa		4.19	□□□□□ -1.74
CHD9-210	ENST00000564582	SPRY4	Q9C004	299 aa		4.19	□□□□□ -1.74
CHD9-210	ENST00000564582	AGRN	O00468	2067 aa		4.18	□□□□□ -1.74
CHD9-210	ENST00000564582		A0A0C4DFX4	3053 aa		4.18	□□□□□ -1.74
CHD9-210	ENST00000564582	TMSB15B	A0A087X1C1	80 aa		4.18	□□□□□ -1.74
CHD9-210	ENST00000564582	IGHV1-3	A0A0C4DH29	117 aa		4.18	□□□□□ -1.74
CHD9-210	ENST00000564582	TRBV6-5	A0A0K0K1A5	114 aa		4.18	□□□□□ -1.74
CHD9-210	ENST00000564582	FAM236A	A0A1B0GUQ0	79 aa		4.18	□□□□□ -1.74
CHD9-210	ENST00000564582	FAM236B	A0A1B0GV22	79 aa		4.18	□□□□□ -1.74
CHD9-210	ENST00000564582		A4D1N5	150 aa		4.18	□□□□□ -1.74
CHD9-210	ENST00000564582		F8WDY8	70 aa		4.18	□□□□□ -1.74
CHD9-210	ENST00000564582	SMKR1	H3BMG3	65 aa		4.18	□□□□□ -1.74
CHD9-210	ENST00000564582	CDX4	O14627	284 aa	Predicted RBP	4.18	□□□□□ -1.74
CHD9-210	ENST00000564582	ENSA	O43768	121 aa	Known RBP	4.18	□□□□□ -1.74
CHD9-210	ENST00000564582	BRI3	O95415	125 aa		4.18	□□□□□ -1.74
CHD9-210	ENST00000564582	ID1	P41134	155 aa		4.18	□□□□□ -1.74
CHD9-210	ENST00000564582	KLK9	Q2XQG4	91 aa		4.18	□□□□□ -1.74
CHD9-210	ENST00000564582	ZNF876P	Q49A33	203 aa		4.18	□□□□□ -1.74
CHD9-210	ENST00000564582	ATP5EP2	Q5VTU8	51 aa		4.18	□□□□□ -1.74
CHD9-210	ENST00000564582	SPINK14	Q6IE38	97 aa		4.18	□□□□□ -1.74
CHD9-210	ENST00000564582	FAM53A	Q6NSI3	398 aa	Predicted RBP	4.18	□□□□□ -1.74
CHD9-210	ENST00000564582	C9orf139	Q6ZV77	190 aa		4.18	□□□□□ -1.74
CHD9-210	ENST00000564582	RNF182	Q8N6D2	247 aa		4.18	□□□□□ -1.74
CHD9-210	ENST00000564582	SERP2	Q8N6R1	65 aa		4.18	□□□□□ -1.74
CHD9-210	ENST00000564582	TTTY13	Q9BZ97	58 aa		4.18	□□□□□ -1.74
CHD9-210	ENST00000564582	LAMTOR3	Q9UHA4	124 aa		4.18	□□□□□ -1.74
CHD9-210	ENST00000564582	KLK9	Q9UKQ9	250 aa		4.18	□□□□□ -1.74
CHD9-210	ENST00000564582	ICOS	Q9Y6W8	199 aa		4.18	□□□□□ -1.74
CHD9-210	ENST00000564582	ASCC3	Q8N3C0	2202 aa	Known RBP	4.18	□□□□□ -1.74

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