RNA–Protein interactions for RNA: ENST00000564503.5

CAPN3-212, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 593 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-212ENST00000564503 PPDPFLQ8WWR9 84 aa3.6□□□□□ -1.83
CAPN3-212ENST00000564503 DUX5Q96PT3 197 aa3.6□□□□□ -1.83
CAPN3-212ENST00000564503 SMIM2Q9BVW6 85 aa3.6□□□□□ -1.83
CAPN3-212ENST00000564503 SMAD5-AS1Q9Y6J3 95 aa3.6□□□□□ -1.83
CAPN3-212ENST00000564503 FAM186AA6NE01 2351 aa3.6□□□□□ -1.83
CAPN3-212ENST00000564503 ASH1LQ9NR48 2969 aaKnown RBP3.6□□□□□ -1.83
CAPN3-212ENST00000564503 IGKV3D-20A0A0C4DH25 116 aa3.59□□□□□ -1.83
CAPN3-212ENST00000564503 IGHV7-4-1A0A0J9YVY3 117 aa3.59□□□□□ -1.83
CAPN3-212ENST00000564503 SPAARA0A1B0GVQ0 90 aa3.59□□□□□ -1.83
CAPN3-212ENST00000564503 LINC01549A6NIU2 74 aa3.59□□□□□ -1.83
CAPN3-212ENST00000564503 TIMM23O14925 209 aa3.59□□□□□ -1.83
CAPN3-212ENST00000564503 IGHG4P01861 327 aa3.59□□□□□ -1.83
CAPN3-212ENST00000564503 TRGV3P03979 118 aa3.59□□□□□ -1.83
CAPN3-212ENST00000564503 SPINK8P0C7L1 97 aa3.59□□□□□ -1.83
CAPN3-212ENST00000564503 HLA-DMBP28068 263 aa3.59□□□□□ -1.83
CAPN3-212ENST00000564503 PSMB2P49721 201 aa3.59□□□□□ -1.83
CAPN3-212ENST00000564503 SUMO2P61956 95 aaKnown RBP3.59□□□□□ -1.83
CAPN3-212ENST00000564503 C5orf64Q2M2E5 130 aa3.59□□□□□ -1.83
CAPN3-212ENST00000564503 TMEM78Q5T7P6 136 aa3.59□□□□□ -1.83
CAPN3-212ENST00000564503 AMTNQ6UX39 209 aa3.59□□□□□ -1.83
CAPN3-212ENST00000564503 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa3.59□□□□□ -1.83
CAPN3-212ENST00000564503 STHQ8IWL8 128 aa3.59□□□□□ -1.83
CAPN3-212ENST00000564503 DYNAPQ8N1N2 210 aa3.59□□□□□ -1.83
CAPN3-212ENST00000564503 TOMM6Q96B49 74 aa3.59□□□□□ -1.83
CAPN3-212ENST00000564503 SCGB3A1Q96QR1 104 aa3.59□□□□□ -1.83
CAPN3-212ENST00000564503 C20orf78Q9BR46 151 aa3.59□□□□□ -1.83
CAPN3-212ENST00000564503 UFC1Q9Y3C8 167 aa3.59□□□□□ -1.83
CAPN3-212ENST00000564503 S4R3C0 116 aa3.59□□□□□ -1.83
CAPN3-212ENST00000564503 TRIOO75962 3097 aa3.59□□□□□ -1.84
CAPN3-212ENST00000564503 ACACBO00763 2458 aa3.59□□□□□ -1.84
CAPN3-212ENST00000564503 MUC4Q99102 2169 aa3.58□□□□□ -1.84
CAPN3-212ENST00000564503 TRBV20-1A0A075B6N2 111 aa3.58□□□□□ -1.84
CAPN3-212ENST00000564503 TMEM89A2RUT3 159 aa3.58□□□□□ -1.84
CAPN3-212ENST00000564503 OOSP1A8MZH6 123 aa3.58□□□□□ -1.84
CAPN3-212ENST00000564503 PRAC2D3DTV9 90 aa3.58□□□□□ -1.84
CAPN3-212ENST00000564503 E7EQL1 145 aa3.58□□□□□ -1.84
CAPN3-212ENST00000564503 TMEM262E9PQX1 116 aa3.58□□□□□ -1.84
CAPN3-212ENST00000564503 M0QXV9 152 aa3.58□□□□□ -1.84
CAPN3-212ENST00000564503 M0R381 172 aa3.58□□□□□ -1.84
CAPN3-212ENST00000564503 TSPAN13O95857 204 aa3.58□□□□□ -1.84
CAPN3-212ENST00000564503 PPP1R17O96001 155 aa3.58□□□□□ -1.84
CAPN3-212ENST00000564503 ZNF688P0C7X2 276 aa3.58□□□□□ -1.84
CAPN3-212ENST00000564503 EDN2P20800 178 aa3.58□□□□□ -1.84
CAPN3-212ENST00000564503 INSL3P51460 131 aa3.58□□□□□ -1.84
CAPN3-212ENST00000564503 UBE2D1P51668 147 aa3.58□□□□□ -1.84
CAPN3-212ENST00000564503 EFNA4P52798 201 aa3.58□□□□□ -1.84
CAPN3-212ENST00000564503 UBE2D3P61077 147 aa3.58□□□□□ -1.84
CAPN3-212ENST00000564503 HERVK_113P61574 105 aa3.58□□□□□ -1.84
CAPN3-212ENST00000564503 UBE2D2P62837 147 aa3.58□□□□□ -1.84
CAPN3-212ENST00000564503 ATP5G2Q06055 141 aa3.58□□□□□ -1.84
CAPN3-212ENST00000564503 PAPPA-AS1Q5QFB9 102 aa3.58□□□□□ -1.84
CAPN3-212ENST00000564503 SPANXN1Q5VSR9 72 aa3.58□□□□□ -1.84
CAPN3-212ENST00000564503 C9orf47Q6ZRZ4 202 aa3.58□□□□□ -1.84
CAPN3-212ENST00000564503 Q6ZUT4 128 aa3.58□□□□□ -1.84
CAPN3-212ENST00000564503 TEN1Q86WV5 123 aa3.58□□□□□ -1.84
CAPN3-212ENST00000564503 SBSPONQ8IVN8 264 aa3.58□□□□□ -1.84
CAPN3-212ENST00000564503 NEXN-AS1Q8NBZ9 246 aa3.58□□□□□ -1.84
CAPN3-212ENST00000564503 LY6G5BQ8NDX9 201 aa3.58□□□□□ -1.84
CAPN3-212ENST00000564503 BAALCQ8WXS3 180 aa3.58□□□□□ -1.84
CAPN3-212ENST00000564503 PRADC1Q9BSG0 188 aa3.58□□□□□ -1.84
CAPN3-212ENST00000564503 DPM3Q9P2X0 92 aa3.58□□□□□ -1.84
CAPN3-212ENST00000564503 ERG28Q9UKR5 140 aa3.58□□□□□ -1.84
CAPN3-212ENST00000564503 AHCTF1Q8WYP5 2266 aa3.58□□□□□ -1.84
CAPN3-212ENST00000564503 FAM208BQ5VWN6 2430 aa3.58□□□□□ -1.84
CAPN3-212ENST00000564503 IGHV1-69DA0A0B4J2H0 117 aa3.57□□□□□ -1.84
CAPN3-212ENST00000564503 LOC107984156A0A0G2JMH3 177 aa3.57□□□□□ -1.84
CAPN3-212ENST00000564503 CENPVL3A0A0U1RRI6 287 aa3.57□□□□□ -1.84
CAPN3-212ENST00000564503 ZNF815PA8K554 130 aa3.57□□□□□ -1.84
CAPN3-212ENST00000564503 A8MWV9 139 aa3.57□□□□□ -1.84
CAPN3-212ENST00000564503 ODF3BA8MYP8 253 aa3.57□□□□□ -1.84
CAPN3-212ENST00000564503 M0R1W7 72 aa3.57□□□□□ -1.84
CAPN3-212ENST00000564503 SPRY2O43597 315 aa3.57□□□□□ -1.84
CAPN3-212ENST00000564503 BUB3O43684 328 aa3.57□□□□□ -1.84
CAPN3-212ENST00000564503 IGHV3-23P01764 117 aa3.57□□□□□ -1.84
CAPN3-212ENST00000564503 CTSGP08311 255 aa3.57□□□□□ -1.84
CAPN3-212ENST00000564503 COX6B1P14854 86 aa3.57□□□□□ -1.84
CAPN3-212ENST00000564503 PTPRZ1P23471 2315 aaPredicted RBP3.57□□□□□ -1.84
CAPN3-212ENST00000564503 DLX1P56177 255 aa3.57□□□□□ -1.84
CAPN3-212ENST00000564503 PRB3Q04118 309 aaPredicted RBP3.57□□□□□ -1.84
CAPN3-212ENST00000564503 SRSF9Q13242 221 aaKnown RBP eCLIP3.57□□□□□ -1.84
CAPN3-212ENST00000564503 EBI3Q14213 229 aa3.57□□□□□ -1.84
CAPN3-212ENST00000564503 HES1Q14469 280 aa3.57□□□□□ -1.84
CAPN3-212ENST00000564503 KLK9Q2XQG4 91 aa3.57□□□□□ -1.84
CAPN3-212ENST00000564503 C6orf226Q5I0X4 101 aa3.57□□□□□ -1.84
CAPN3-212ENST00000564503 C10orf25Q5T742 122 aa3.57□□□□□ -1.84
CAPN3-212ENST00000564503 SCGB1D4Q6XE38 83 aa3.57□□□□□ -1.84
CAPN3-212ENST00000564503 ARL17AQ8IVW1 177 aa3.57□□□□□ -1.84
CAPN3-212ENST00000564503 CARD19Q96LW7 228 aa3.57□□□□□ -1.84
CAPN3-212ENST00000564503 AGPAT4-IT1Q9H0P7 198 aa3.57□□□□□ -1.84
CAPN3-212ENST00000564503 DPH3P1Q9H4G8 78 aa3.57□□□□□ -1.84
CAPN3-212ENST00000564503 KLK9Q9UKQ9 250 aa3.57□□□□□ -1.84
CAPN3-212ENST00000564503 LENEPQ9Y5L5 61 aa3.57□□□□□ -1.84
CAPN3-212ENST00000564503 TRAV8-2A0A0B4J237 113 aa3.56□□□□□ -1.84
CAPN3-212ENST00000564503 TRAV26-2A0A0B4J265 109 aa3.56□□□□□ -1.84
CAPN3-212ENST00000564503 H3BVH4 76 aa3.56□□□□□ -1.84
CAPN3-212ENST00000564503 MT-ATP8P03928 68 aa3.56□□□□□ -1.84
CAPN3-212ENST00000564503 CD7P09564 240 aa3.56□□□□□ -1.84
CAPN3-212ENST00000564503 XGP55808 180 aa3.56□□□□□ -1.84
CAPN3-212ENST00000564503 RPL32P62910 135 aaKnown RBP3.56□□□□□ -1.84
CAPN3-212ENST00000564503 ZFAND6Q6FIF0 208 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms