RNA–Protein interactions for RNA: ENST00000563911.5

HERPUD1-208, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 3

Gene HERPUD1, Length 844 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-208ENST00000563911 FLI1Q01543 452 aaPredicted RBP3.63□□□□□ -1.83
HERPUD1-208ENST00000563911 REG3AQ06141 175 aa3.63□□□□□ -1.83
HERPUD1-208ENST00000563911 SLAQ13239 276 aa3.63□□□□□ -1.83
HERPUD1-208ENST00000563911 TMEM256Q8N2U0 113 aa3.63□□□□□ -1.83
HERPUD1-208ENST00000563911 OR10J6PQ8NGY7 276 aa3.63□□□□□ -1.83
HERPUD1-208ENST00000563911 OR2G3Q8NGZ4 309 aa3.63□□□□□ -1.83
HERPUD1-208ENST00000563911 CIRBP-AS1Q8TBR5 109 aa3.63□□□□□ -1.83
HERPUD1-208ENST00000563911 LINC00467Q9BRT7 94 aa3.63□□□□□ -1.83
HERPUD1-208ENST00000563911 TMEM222Q9H0R3 208 aa3.63□□□□□ -1.83
HERPUD1-208ENST00000563911 ENY2Q9NPA8 101 aa3.63□□□□□ -1.83
HERPUD1-208ENST00000563911 TRAV12-3A0A0B4J271 114 aa3.62□□□□□ -1.83
HERPUD1-208ENST00000563911 LINC00587B1AMM8 73 aa3.62□□□□□ -1.83
HERPUD1-208ENST00000563911 H7BYZ3 331 aa3.62□□□□□ -1.83
HERPUD1-208ENST00000563911 LECT2O14960 151 aa3.62□□□□□ -1.83
HERPUD1-208ENST00000563911 PPP1R2P9O14990 202 aa3.62□□□□□ -1.83
HERPUD1-208ENST00000563911 RLN2P04090 185 aa3.62□□□□□ -1.83
HERPUD1-208ENST00000563911 CRYBA4P53673 196 aa3.62□□□□□ -1.83
HERPUD1-208ENST00000563911 PSG3Q16557 428 aa3.62□□□□□ -1.83
HERPUD1-208ENST00000563911 LPCAT3Q6P1A2 487 aa3.62□□□□□ -1.83
HERPUD1-208ENST00000563911 PATE2Q6UY27 113 aa3.62□□□□□ -1.83
HERPUD1-208ENST00000563911 ZNF738Q8NE65 137 aa3.62□□□□□ -1.83
HERPUD1-208ENST00000563911 OR13C8Q8NGS7 320 aa3.62□□□□□ -1.83
HERPUD1-208ENST00000563911 MARCH1Q8TCQ1 289 aa3.62□□□□□ -1.83
HERPUD1-208ENST00000563911 ZNF431Q8TF32 576 aaPredicted RBP3.62□□□□□ -1.83
HERPUD1-208ENST00000563911 S100A16Q96FQ6 103 aaKnown RBP3.62□□□□□ -1.83
HERPUD1-208ENST00000563911 TRGV9Q99603 122 aa3.62□□□□□ -1.83
HERPUD1-208ENST00000563911 PDCD10Q9BUL8 212 aa3.62□□□□□ -1.83
HERPUD1-208ENST00000563911 ZNF331Q9NQX6 463 aaPredicted RBP3.62□□□□□ -1.83
HERPUD1-208ENST00000563911 CSDC2Q9Y534 153 aaKnown RBP3.62□□□□□ -1.83
HERPUD1-208ENST00000563911 LY96Q9Y6Y9 160 aa3.62□□□□□ -1.83
HERPUD1-208ENST00000563911 FAT4Q6V0I7 4981 aa3.62□□□□□ -1.83
HERPUD1-208ENST00000563911 H3BRN7 92 aa3.61□□□□□ -1.83
HERPUD1-208ENST00000563911 SLC17A3O00476 420 aa3.61□□□□□ -1.83
HERPUD1-208ENST00000563911 SPINK4O60575 86 aa3.61□□□□□ -1.83
HERPUD1-208ENST00000563911 CD3DP04234 171 aa3.61□□□□□ -1.83
HERPUD1-208ENST00000563911 CRYGDP07320 174 aa3.61□□□□□ -1.83
HERPUD1-208ENST00000563911 SMIM6P0DI80 62 aa3.61□□□□□ -1.83
HERPUD1-208ENST00000563911 ORM2P19652 201 aa3.61□□□□□ -1.83
HERPUD1-208ENST00000563911 S100PP25815 95 aa3.61□□□□□ -1.83
HERPUD1-208ENST00000563911 RCVRNP35243 200 aa3.61□□□□□ -1.83
HERPUD1-208ENST00000563911 GPX4P36969 197 aaPredicted RBP3.61□□□□□ -1.83
HERPUD1-208ENST00000563911 GALR1P47211 349 aa3.61□□□□□ -1.83
HERPUD1-208ENST00000563911 AP3S2P59780 193 aa3.61□□□□□ -1.83
HERPUD1-208ENST00000563911 UBE2NLQ5JXB2 153 aa3.61□□□□□ -1.83
HERPUD1-208ENST00000563911 SNX29P2Q8IUI4 249 aa3.61□□□□□ -1.83
HERPUD1-208ENST00000563911 LGI3Q8N145 548 aa3.61□□□□□ -1.83
HERPUD1-208ENST00000563911 DNAJC30Q96LL9 226 aa3.61□□□□□ -1.83
HERPUD1-208ENST00000563911 NAGKQ9UJ70 344 aa3.61□□□□□ -1.83
HERPUD1-208ENST00000563911 SSR3Q9UNL2 185 aa3.61□□□□□ -1.83
HERPUD1-208ENST00000563911 FUT9Q9Y231 359 aa3.61□□□□□ -1.83
HERPUD1-208ENST00000563911 TMEM56-RWDD3S4R434 201 aa3.61□□□□□ -1.83
HERPUD1-208ENST00000563911 TRGV2A0A075B6R0 118 aa3.6□□□□□ -1.83
HERPUD1-208ENST00000563911 TRGV1A0A0A0MS02 117 aa3.6□□□□□ -1.83
HERPUD1-208ENST00000563911 IBA57-AS1B1ANH7 110 aa3.6□□□□□ -1.83
HERPUD1-208ENST00000563911 IGLV2-8P01709 118 aa3.6□□□□□ -1.83
HERPUD1-208ENST00000563911 SFTA3P0C7M3 94 aa3.6□□□□□ -1.83
HERPUD1-208ENST00000563911 LINC00614P0C842 121 aa3.6□□□□□ -1.83
HERPUD1-208ENST00000563911 PRR9Q5T870 116 aa3.6□□□□□ -1.83
HERPUD1-208ENST00000563911 GPR107Q5VW38 600 aa3.6□□□□□ -1.83
HERPUD1-208ENST00000563911 LYZL2Q7Z4W2 148 aa3.6□□□□□ -1.83
HERPUD1-208ENST00000563911 RBPMSQ93062 196 aaKnown RBP3.6□□□□□ -1.83
HERPUD1-208ENST00000563911 RNF185Q96GF1 192 aa3.6□□□□□ -1.83
HERPUD1-208ENST00000563911 CNBD2Q96M20 576 aa3.6□□□□□ -1.83
HERPUD1-208ENST00000563911 SHANK2-AS3Q9BTD1 123 aa3.6□□□□□ -1.83
HERPUD1-208ENST00000563911 CHAC1Q9BUX1 264 aa3.6□□□□□ -1.83
HERPUD1-208ENST00000563911 MRPL16Q9NX20 251 aaKnown RBP3.6□□□□□ -1.83
HERPUD1-208ENST00000563911 HHLA3Q9XRX5 114 aa3.6□□□□□ -1.83
HERPUD1-208ENST00000563911 ICOSQ9Y6W8 199 aa3.6□□□□□ -1.83
HERPUD1-208ENST00000563911 U3KQ87 197 aa3.6□□□□□ -1.83
HERPUD1-208ENST00000563911 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.59□□□□□ -1.83
HERPUD1-208ENST00000563911 FAM25AB3EWG3 89 aa3.59□□□□□ -1.83
HERPUD1-208ENST00000563911 FAM25CB3EWG5 89 aa3.59□□□□□ -1.83
HERPUD1-208ENST00000563911 FAM25GB3EWG6 89 aa3.59□□□□□ -1.83
HERPUD1-208ENST00000563911 H3BQ15 152 aa3.59□□□□□ -1.83
HERPUD1-208ENST00000563911 PEX7O00628 323 aa3.59□□□□□ -1.83
HERPUD1-208ENST00000563911 PITX3O75364 302 aa3.59□□□□□ -1.83
HERPUD1-208ENST00000563911 NMUP48645 174 aa3.59□□□□□ -1.83
HERPUD1-208ENST00000563911 FGF8P55075 233 aaPredicted RBP3.59□□□□□ -1.83
HERPUD1-208ENST00000563911 UBE2G2P60604 165 aa3.59□□□□□ -1.83
HERPUD1-208ENST00000563911 ERCC8Q13216 396 aa3.59□□□□□ -1.83
HERPUD1-208ENST00000563911 COA6Q5JTJ3 125 aaKnown RBP3.59□□□□□ -1.83
HERPUD1-208ENST00000563911 SPANXN2Q5MJ10 180 aa3.59□□□□□ -1.83
HERPUD1-208ENST00000563911 NEGR1Q7Z3B1 354 aa3.59□□□□□ -1.83
HERPUD1-208ENST00000563911 CAMK2N1Q7Z7J9 78 aa3.59□□□□□ -1.83
HERPUD1-208ENST00000563911 TERB2Q8NHR7 220 aa3.59□□□□□ -1.83
HERPUD1-208ENST00000563911 FAM19A4Q96LR4 140 aa3.59□□□□□ -1.83
HERPUD1-208ENST00000563911 TCEAL7Q9BRU2 100 aa3.59□□□□□ -1.83
HERPUD1-208ENST00000563911 MRPL32Q9BYC8 188 aaKnown RBP3.59□□□□□ -1.83
HERPUD1-208ENST00000563911 NAA60Q9H7X0 242 aa3.59□□□□□ -1.83
HERPUD1-208ENST00000563911 COPZ2Q9P299 210 aa3.59□□□□□ -1.83
HERPUD1-208ENST00000563911 PRO0255Q9UI72 69 aa3.59□□□□□ -1.83
HERPUD1-208ENST00000563911 RCL1Q9Y2P8 373 aaKnown RBP3.59□□□□□ -1.83
HERPUD1-208ENST00000563911 A0A1W2PPV4 95 aa3.58□□□□□ -1.84
HERPUD1-208ENST00000563911 CRYM-AS1A6NIL9 109 aa3.58□□□□□ -1.84
HERPUD1-208ENST00000563911 TMEM238C9JI98 176 aa3.58□□□□□ -1.84
HERPUD1-208ENST00000563911 HPGDSO60760 199 aa3.58□□□□□ -1.84
HERPUD1-208ENST00000563911 MED6O75586 246 aa3.58□□□□□ -1.84
HERPUD1-208ENST00000563911 ADAP1O75689 374 aa3.58□□□□□ -1.84
HERPUD1-208ENST00000563911 EIF3GO75821 320 aaKnown RBP eCLIP3.58□□□□□ -1.84
HERPUD1-208ENST00000563911 S100A8P05109 93 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms