RNA–Protein interactions for RNA: ENST00000563835.1

PTPN9-203, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

TSL 5

Gene PTPN9, Length 338 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-203ENST00000563835 FAM213BQ8TBF2 198 aa6.27□□□□□ -1.41
PTPN9-203ENST00000563835 M0R036 132 aa6.26□□□□□ -1.41
PTPN9-203ENST00000563835 SH2D1AO60880 128 aa6.26□□□□□ -1.41
PTPN9-203ENST00000563835 DNAH10OSP0CZ25 163 aa6.26□□□□□ -1.41
PTPN9-203ENST00000563835 SAPCD1Q5SSQ6 148 aa6.26□□□□□ -1.41
PTPN9-203ENST00000563835 CST9LP1Q5W188 147 aa6.26□□□□□ -1.41
PTPN9-203ENST00000563835 HIST1H2BAQ96A08 127 aa6.26□□□□□ -1.41
PTPN9-203ENST00000563835 TXNDC17Q9BRA2 123 aa6.26□□□□□ -1.41
PTPN9-203ENST00000563835 ZNF471Q9BX82 626 aaPredicted RBP6.26□□□□□ -1.41
PTPN9-203ENST00000563835 KRTAP4-5Q9BYR2 181 aa6.26□□□□□ -1.41
PTPN9-203ENST00000563835 JPT2Q9H910 190 aa6.26□□□□□ -1.41
PTPN9-203ENST00000563835 KANTRA0A1W2PQU2 76 aa6.25□□□□□ -1.41
PTPN9-203ENST00000563835 GRIFINA4D1Z8 144 aa6.25□□□□□ -1.41
PTPN9-203ENST00000563835 HMSDA8MTL9 139 aa6.25□□□□□ -1.41
PTPN9-203ENST00000563835 B4DEV8 164 aa6.25□□□□□ -1.41
PTPN9-203ENST00000563835 PAGE4O60829 102 aa6.25□□□□□ -1.41
PTPN9-203ENST00000563835 ASIPP42127 132 aa6.25□□□□□ -1.41
PTPN9-203ENST00000563835 PPT1P50897 306 aa6.25□□□□□ -1.41
PTPN9-203ENST00000563835 UBE2G1P62253 170 aa6.25□□□□□ -1.41
PTPN9-203ENST00000563835 Q6ZNX1 250 aa6.25□□□□□ -1.41
PTPN9-203ENST00000563835 Q6ZSN1 163 aa6.25□□□□□ -1.41
PTPN9-203ENST00000563835 SAMD10Q9BYL1 202 aa6.25□□□□□ -1.41
PTPN9-203ENST00000563835 PARLQ9H300 379 aa6.25□□□□□ -1.41
PTPN9-203ENST00000563835 LY96Q9Y6Y9 160 aa6.25□□□□□ -1.41
PTPN9-203ENST00000563835 TMSB15BA0A087X1C1 80 aa6.24□□□□□ -1.41
PTPN9-203ENST00000563835 SCO2A0A1W2PP80 73 aa6.24□□□□□ -1.41
PTPN9-203ENST00000563835 FABP5P3A8MUU1 101 aa6.24□□□□□ -1.41
PTPN9-203ENST00000563835 KRBOX1C9JBD0 128 aa6.24□□□□□ -1.41
PTPN9-203ENST00000563835 LTAP01374 205 aa6.24□□□□□ -1.41
PTPN9-203ENST00000563835 SEC11BP0C7V7 166 aa6.24□□□□□ -1.41
PTPN9-203ENST00000563835 BTF3P20290 206 aaKnown RBP6.24□□□□□ -1.41
PTPN9-203ENST00000563835 S100A4P26447 101 aaKnown RBP6.24□□□□□ -1.41
PTPN9-203ENST00000563835 AKR1C3P42330 323 aa6.24□□□□□ -1.41
PTPN9-203ENST00000563835 RHOHQ15669 191 aa6.24□□□□□ -1.41
PTPN9-203ENST00000563835 SFT2D1Q8WV19 159 aa6.24□□□□□ -1.41
PTPN9-203ENST00000563835 FMC1Q96HJ9 113 aa6.24□□□□□ -1.41
PTPN9-203ENST00000563835 NKX6-2Q9C056 277 aaPredicted RBP6.24□□□□□ -1.41
PTPN9-203ENST00000563835 Q9UF83 564 aa6.24□□□□□ -1.41
PTPN9-203ENST00000563835 A0A0D9SG52 128 aa6.23□□□□□ -1.41
PTPN9-203ENST00000563835 PFDN1O60925 122 aa6.23□□□□□ -1.41
PTPN9-203ENST00000563835 LGALSLQ3ZCW2 172 aaPredicted RBP6.23□□□□□ -1.41
PTPN9-203ENST00000563835 FAM162BQ5T6X4 162 aa6.23□□□□□ -1.41
PTPN9-203ENST00000563835 UFSP1Q6NVU6 142 aa6.23□□□□□ -1.41
PTPN9-203ENST00000563835 TMUB2Q71RG4 321 aa6.23□□□□□ -1.41
PTPN9-203ENST00000563835 COX8CQ7Z4L0 72 aa6.23□□□□□ -1.41
PTPN9-203ENST00000563835 Q8N3U1 123 aa6.23□□□□□ -1.41
PTPN9-203ENST00000563835 STOML3Q8TAV4 291 aa6.23□□□□□ -1.41
PTPN9-203ENST00000563835 MBD3L1Q8WWY6 194 aa6.23□□□□□ -1.41
PTPN9-203ENST00000563835 PTH2Q96A98 100 aa6.23□□□□□ -1.41
PTPN9-203ENST00000563835 PRADC1Q9BSG0 188 aa6.23□□□□□ -1.41
PTPN9-203ENST00000563835 IL36BQ9NZH7 164 aa6.23□□□□□ -1.41
PTPN9-203ENST00000563835 MSRB1Q9NZV6 116 aa6.23□□□□□ -1.41
PTPN9-203ENST00000563835 TRBV6-1A0A0K0K1D8 114 aa6.22□□□□□ -1.41
PTPN9-203ENST00000563835 TRBV6-4A0A1B0GX49 114 aa6.22□□□□□ -1.41
PTPN9-203ENST00000563835 GAGE12JA6NER3 117 aa6.22□□□□□ -1.41
PTPN9-203ENST00000563835 UMAD1C9J7I0 102 aa6.22□□□□□ -1.41
PTPN9-203ENST00000563835 CRYGDP07320 174 aa6.22□□□□□ -1.41
PTPN9-203ENST00000563835 ARMS2P0C7Q2 107 aa6.22□□□□□ -1.41
PTPN9-203ENST00000563835 LINC00694P0DN24 101 aa6.22□□□□□ -1.41
PTPN9-203ENST00000563835 MGST1P10620 155 aaKnown RBP6.22□□□□□ -1.41
PTPN9-203ENST00000563835 RPL19P84098 196 aaKnown RBP6.22□□□□□ -1.41
PTPN9-203ENST00000563835 GAGE1Q13065 139 aa6.22□□□□□ -1.41
PTPN9-203ENST00000563835 GAGE4Q13068 117 aa6.22□□□□□ -1.41
PTPN9-203ENST00000563835 GAGE5Q13069 117 aa6.22□□□□□ -1.41
PTPN9-203ENST00000563835 ZNF674Q2M3X9 581 aa6.22□□□□□ -1.41
PTPN9-203ENST00000563835 LINC01559Q495D7 138 aa6.22□□□□□ -1.41
PTPN9-203ENST00000563835 GAGE13Q4V321 117 aa6.22□□□□□ -1.41
PTPN9-203ENST00000563835 FAM74A4Q5TZK3 123 aa6.22□□□□□ -1.41
PTPN9-203ENST00000563835 DMRTA1Q5VZB9 504 aa6.22□□□□□ -1.41
PTPN9-203ENST00000563835 C14orf178Q8N769 122 aaPredicted RBP6.22□□□□□ -1.41
PTPN9-203ENST00000563835 TCEAL7Q9BRU2 100 aa6.22□□□□□ -1.41
PTPN9-203ENST00000563835 ZFP30Q9Y2G7 519 aa6.22□□□□□ -1.41
PTPN9-203ENST00000563835 A0A087WWL8 130 aa6.21□□□□□ -1.42
PTPN9-203ENST00000563835 IGHV3-38A0A0C4DH36 116 aa6.21□□□□□ -1.42
PTPN9-203ENST00000563835 A8MWV9 139 aa6.21□□□□□ -1.42
PTPN9-203ENST00000563835 CDK2AP2O75956 126 aa6.21□□□□□ -1.42
PTPN9-203ENST00000563835 IGHV3-30P01768 117 aa6.21□□□□□ -1.42
PTPN9-203ENST00000563835 IGHV3-33P01772 117 aa6.21□□□□□ -1.42
PTPN9-203ENST00000563835 IGHV3-30-3P0DP02 117 aa6.21□□□□□ -1.42
PTPN9-203ENST00000563835 IGHV3-30-5P0DP03 117 aa6.21□□□□□ -1.42
PTPN9-203ENST00000563835 TPT1P13693 172 aaKnown RBP6.21□□□□□ -1.42
PTPN9-203ENST00000563835 EVI2AP22794 236 aa6.21□□□□□ -1.42
PTPN9-203ENST00000563835 TIRAPP58753 221 aa6.21□□□□□ -1.42
PTPN9-203ENST00000563835 ERVFC1-1P60608 527 aa6.21□□□□□ -1.42
PTPN9-203ENST00000563835 CCL20P78556 96 aa6.21□□□□□ -1.42
PTPN9-203ENST00000563835 OR10J3Q5JRS4 329 aa6.21□□□□□ -1.42
PTPN9-203ENST00000563835 DNLZQ5SXM8 178 aa6.21□□□□□ -1.42
PTPN9-203ENST00000563835 SH2D6Q7Z4S9 175 aa6.21□□□□□ -1.42
PTPN9-203ENST00000563835 DERL1Q9BUN8 251 aa6.21□□□□□ -1.42
PTPN9-203ENST00000563835 SCRT2Q9NQ03 307 aa6.21□□□□□ -1.42
PTPN9-203ENST00000563835 TRAV9-2A0A087WT02 112 aa6.2□□□□□ -1.42
PTPN9-203ENST00000563835 A0A087WTM6 91 aa6.2□□□□□ -1.42
PTPN9-203ENST00000563835 M0R381 172 aa6.2□□□□□ -1.42
PTPN9-203ENST00000563835 CIDEAO60543 219 aa6.2□□□□□ -1.42
PTPN9-203ENST00000563835 H2AFB1P0C5Y9 115 aa6.2□□□□□ -1.42
PTPN9-203ENST00000563835 LINC01556Q5JQF7 62 aa6.2□□□□□ -1.42
PTPN9-203ENST00000563835 ZFP2Q6ZN57 461 aa6.2□□□□□ -1.42
PTPN9-203ENST00000563835 MAPKAPK5-AS1Q8N8E1 139 aa6.2□□□□□ -1.42
PTPN9-203ENST00000563835 ATP6V0E2Q8NHE4 81 aa6.2□□□□□ -1.42
PTPN9-203ENST00000563835 GTSF1LQ9H1H1 148 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms