RNA–Protein interactions for RNA: ENST00000563498.1

NME3-204, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2 BASIC

Gene NME3, Length 920 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-204ENST00000563498 PIK3CD-AS1Q5SR53 167 aa12.28□□□□□ -0.44
NME3-204ENST00000563498 DAZ4Q86SG3 579 aaKnown RBP12.28□□□□□ -0.44
NME3-204ENST00000563498 SGK494Q96LW2 274 aa12.28□□□□□ -0.44
NME3-204ENST00000563498 SMIM3Q9BZL3 60 aa12.28□□□□□ -0.44
NME3-204ENST00000563498 DAZ3Q9NR90 486 aaKnown RBP12.28□□□□□ -0.44
NME3-204ENST00000563498 A8MWV9 139 aa12.27□□□□□ -0.45
NME3-204ENST00000563498 K7EQM0 130 aa12.27□□□□□ -0.45
NME3-204ENST00000563498 MPC2O95563 127 aa12.27□□□□□ -0.45
NME3-204ENST00000563498 OXTP01178 125 aa12.27□□□□□ -0.45
NME3-204ENST00000563498 TCRAP04437 139 aa12.27□□□□□ -0.45
NME3-204ENST00000563498 RPL12P30050 165 aaKnown RBP12.27□□□□□ -0.45
NME3-204ENST00000563498 KRTAP10-4P60372 401 aaPredicted RBP12.27□□□□□ -0.45
NME3-204ENST00000563498 LINC00299Q6ZSB3 139 aa12.27□□□□□ -0.45
NME3-204ENST00000563498 Q8N976 141 aa12.27□□□□□ -0.45
NME3-204ENST00000563498 C5orf17Q8NAS9 161 aa12.27□□□□□ -0.45
NME3-204ENST00000563498 ENKURQ8TC29 256 aa12.27□□□□□ -0.45
NME3-204ENST00000563498 BAALCQ8WXS3 180 aa12.27□□□□□ -0.45
NME3-204ENST00000563498 RMI2Q96E14 147 aa12.27□□□□□ -0.45
NME3-204ENST00000563498 CHAC1Q9BUX1 264 aa12.27□□□□□ -0.45
NME3-204ENST00000563498 PARLQ9H300 379 aa12.27□□□□□ -0.45
NME3-204ENST00000563498 GAGE12JA6NER3 117 aa12.26□□□□□ -0.45
NME3-204ENST00000563498 RAB2AP61019 212 aa12.26□□□□□ -0.45
NME3-204ENST00000563498 GAGE1Q13065 139 aa12.26□□□□□ -0.45
NME3-204ENST00000563498 GAGE4Q13068 117 aa12.26□□□□□ -0.45
NME3-204ENST00000563498 GAGE5Q13069 117 aa12.26□□□□□ -0.45
NME3-204ENST00000563498 GAGE13Q4V321 117 aa12.26□□□□□ -0.45
NME3-204ENST00000563498 TMEM75Q8N9X5 138 aa12.26□□□□□ -0.45
NME3-204ENST00000563498 PSG8Q9UQ74 426 aa12.26□□□□□ -0.45
NME3-204ENST00000563498 LRP1Q07954 4544 aaKnown RBP12.25□□□□□ -0.45
NME3-204ENST00000563498 RBFOX3A6NFN3 312 aa12.25□□□□□ -0.45
NME3-204ENST00000563498 SEC11BP0C7V7 166 aa12.25□□□□□ -0.45
NME3-204ENST00000563498 ZFP69Q49AA0 526 aa12.25□□□□□ -0.45
NME3-204ENST00000563498 LINC01620Q4KN68 170 aa12.25□□□□□ -0.45
NME3-204ENST00000563498 SMUG1Q53HV7 270 aa12.25□□□□□ -0.45
NME3-204ENST00000563498 CYB561D1Q8N8Q1 229 aa12.25□□□□□ -0.45
NME3-204ENST00000563498 RNF222A6NCQ9 220 aa12.24□□□□□ -0.45
NME3-204ENST00000563498 HMGB3O15347 200 aaKnown RBP12.24□□□□□ -0.45
NME3-204ENST00000563498 IGLV2-11P01706 119 aa12.24□□□□□ -0.45
NME3-204ENST00000563498 ARL14EPLP0DKL9 152 aa12.24□□□□□ -0.45
NME3-204ENST00000563498 FGF8P55075 233 aaPredicted RBP12.24□□□□□ -0.45
NME3-204ENST00000563498 OR10G9Q8NGN4 311 aa12.24□□□□□ -0.45
NME3-204ENST00000563498 OR10G7Q8NGN6 311 aa12.24□□□□□ -0.45
NME3-204ENST00000563498 SUN5Q8TC36 379 aa12.24□□□□□ -0.45
NME3-204ENST00000563498 LINC00479Q96M42 142 aa12.24□□□□□ -0.45
NME3-204ENST00000563498 WFDC1Q9HC57 220 aa12.24□□□□□ -0.45
NME3-204ENST00000563498 UBR4Q5T4S7 5183 aa12.23□□□□□ -0.45
NME3-204ENST00000563498 STAG3L2P0CL84 134 aa12.23□□□□□ -0.45
NME3-204ENST00000563498 STAG3L3P0CL85 134 aa12.23□□□□□ -0.45
NME3-204ENST00000563498 FLI1Q01543 452 aaPredicted RBP12.23□□□□□ -0.45
NME3-204ENST00000563498 URGCP-MRPS24S4R325 110 aa12.23□□□□□ -0.45
NME3-204ENST00000563498 INMT-MINDY4F8WBC2 141 aa12.22□□□□□ -0.45
NME3-204ENST00000563498 SAPCD1Q5SSQ6 148 aa12.22□□□□□ -0.45
NME3-204ENST00000563498 UFSP1Q6NVU6 142 aa12.22□□□□□ -0.45
NME3-204ENST00000563498 CIRBP-AS1Q8TBR5 109 aa12.22□□□□□ -0.45
NME3-204ENST00000563498 S100ZQ8WXG8 99 aa12.22□□□□□ -0.45
NME3-204ENST00000563498 CDC34P49427 236 aaPredicted RBP12.21□□□□□ -0.45
NME3-204ENST00000563498 LGALSLQ3ZCW2 172 aaPredicted RBP12.21□□□□□ -0.45
NME3-204ENST00000563498 NIT1Q86X76 327 aa12.21□□□□□ -0.45
NME3-204ENST00000563498 OR2T35Q8NGX2 323 aa12.21□□□□□ -0.45
NME3-204ENST00000563498 Q9UF83 564 aa12.21□□□□□ -0.45
NME3-204ENST00000563498 EPDR1Q9UM22 224 aa12.21□□□□□ -0.45
NME3-204ENST00000563498 IGKV2D-24A0A075B6R9 120 aa12.2□□□□□ -0.46
NME3-204ENST00000563498 IGKV3D-20A0A0C4DH25 116 aa12.2□□□□□ -0.46
NME3-204ENST00000563498 IGLV2-8P01709 118 aa12.2□□□□□ -0.46
NME3-204ENST00000563498 S100A4P26447 101 aaKnown RBP12.2□□□□□ -0.46
NME3-204ENST00000563498 PRNTQ86SH4 94 aa12.2□□□□□ -0.46
NME3-204ENST00000563498 OR2G3Q8NGZ4 309 aa12.2□□□□□ -0.46
NME3-204ENST00000563498 SAMD10Q9BYL1 202 aa12.2□□□□□ -0.46
NME3-204ENST00000563498 GCHFRP30047 84 aa12.19□□□□□ -0.46
NME3-204ENST00000563498 ASIPP42127 132 aa12.19□□□□□ -0.46
NME3-204ENST00000563498 SUMO1P63165 101 aaKnown RBP12.19□□□□□ -0.46
NME3-204ENST00000563498 ATRAIDQ6UW56 229 aa12.19□□□□□ -0.46
NME3-204ENST00000563498 C14orf178Q8N769 122 aaPredicted RBP12.19□□□□□ -0.46
NME3-204ENST00000563498 MARVELD1Q9BSK0 173 aa12.19□□□□□ -0.46
NME3-204ENST00000563498 CHCHD7Q9BUK0 85 aa12.19□□□□□ -0.46
NME3-204ENST00000563498 IL36BQ9NZH7 164 aa12.19□□□□□ -0.46
NME3-204ENST00000563498 FAT3Q8TDW7 4589 aa12.18□□□□□ -0.46
NME3-204ENST00000563498 A0A1B0GVG6 124 aa12.18□□□□□ -0.46
NME3-204ENST00000563498 RHODO00212 210 aa12.18□□□□□ -0.46
NME3-204ENST00000563498 SSNA1O43805 119 aa12.18□□□□□ -0.46
NME3-204ENST00000563498 UPK1BO75841 260 aa12.18□□□□□ -0.46
NME3-204ENST00000563498 ELOBQ15370 118 aa12.18□□□□□ -0.46
NME3-204ENST00000563498 RAB24Q969Q5 203 aa12.18□□□□□ -0.46
NME3-204ENST00000563498 DNAJC30Q96LL9 226 aa12.18□□□□□ -0.46
NME3-204ENST00000563498 KLK12Q9UKR0 248 aa12.18□□□□□ -0.46
NME3-204ENST00000563498 PLA2G2DQ9UNK4 145 aa12.18□□□□□ -0.46
NME3-204ENST00000563498 JPT2Q9H910 190 aa12.17□□□□□ -0.46
NME3-204ENST00000563498 TMEM167BQ9NRX6 74 aa12.17□□□□□ -0.46
NME3-204ENST00000563498 FABP5P3A8MUU1 101 aa12.16□□□□□ -0.46
NME3-204ENST00000563498 UBE2WQ96B02 151 aa12.16□□□□□ -0.46
NME3-204ENST00000563498 PSMG3Q9BT73 122 aaPredicted RBP12.16□□□□□ -0.46
NME3-204ENST00000563498 A0A087WX48 190 aa12.15□□□□□ -0.46
NME3-204ENST00000563498 CXorf1O96002 111 aa12.15□□□□□ -0.46
NME3-204ENST00000563498 MBP02144 154 aa12.15□□□□□ -0.46
NME3-204ENST00000563498 Q0VG73 95 aa12.15□□□□□ -0.46
NME3-204ENST00000563498 C14orf177Q52M58 125 aa12.15□□□□□ -0.46
NME3-204ENST00000563498 DNLZQ5SXM8 178 aa12.15□□□□□ -0.46
NME3-204ENST00000563498 DMRTA1Q5VZB9 504 aa12.15□□□□□ -0.46
NME3-204ENST00000563498 PFDN1O60925 122 aa12.14□□□□□ -0.47
NME3-204ENST00000563498 IFITM3Q01628 133 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms