RNA–Protein interactions for RNA: ENST00000562914.1

HERPUD1-205, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-205ENST00000562914 DPPA3Q6W0C5 159 aa10.37□□□□□ -0.75
HERPUD1-205ENST00000562914 ALG5Q9Y673 324 aa10.37□□□□□ -0.75
HERPUD1-205ENST00000562914 TRAV8-1A0A0A6YYK1 113 aa10.36□□□□□ -0.75
HERPUD1-205ENST00000562914 IGHV3-73A0A0B4J1V6 119 aa10.36□□□□□ -0.75
HERPUD1-205ENST00000562914 A0A1W2PPV4 95 aa10.36□□□□□ -0.75
HERPUD1-205ENST00000562914 RBFOX3A6NFN3 312 aa10.36□□□□□ -0.75
HERPUD1-205ENST00000562914 A8MWV9 139 aa10.36□□□□□ -0.75
HERPUD1-205ENST00000562914 H0YIZ8 118 aa10.36□□□□□ -0.75
HERPUD1-205ENST00000562914 LECT2O14960 151 aa10.36□□□□□ -0.75
HERPUD1-205ENST00000562914 FGF8P55075 233 aaPredicted RBP10.36□□□□□ -0.75
HERPUD1-205ENST00000562914 ZFP69Q49AA0 526 aa10.36□□□□□ -0.75
HERPUD1-205ENST00000562914 URGCP-MRPS24S4R325 110 aa10.36□□□□□ -0.75
HERPUD1-205ENST00000562914 LINC00694P0DN24 101 aa10.35□□□□□ -0.75
HERPUD1-205ENST00000562914 H2BFSP57053 126 aa10.35□□□□□ -0.75
HERPUD1-205ENST00000562914 DAZ4Q86SG3 579 aaKnown RBP10.35□□□□□ -0.75
HERPUD1-205ENST00000562914 CYB561D1Q8N8Q1 229 aa10.35□□□□□ -0.75
HERPUD1-205ENST00000562914 OR10G9Q8NGN4 311 aa10.35□□□□□ -0.75
HERPUD1-205ENST00000562914 PPP1R1CQ8WVI7 109 aa10.35□□□□□ -0.75
HERPUD1-205ENST00000562914 MED28Q9H204 178 aa10.35□□□□□ -0.75
HERPUD1-205ENST00000562914 DAZ3Q9NR90 486 aaKnown RBP10.35□□□□□ -0.75
HERPUD1-205ENST00000562914 HSPB11Q9Y547 144 aa10.35□□□□□ -0.75
HERPUD1-205ENST00000562914 RNF222A6NCQ9 220 aa10.34□□□□□ -0.75
HERPUD1-205ENST00000562914 PGPEP1LA6NFU8 196 aa10.34□□□□□ -0.75
HERPUD1-205ENST00000562914 IGLV2-8P01709 118 aa10.34□□□□□ -0.75
HERPUD1-205ENST00000562914 KRTAP10-4P60372 401 aaPredicted RBP10.34□□□□□ -0.75
HERPUD1-205ENST00000562914 C5orf17Q8NAS9 161 aa10.34□□□□□ -0.75
HERPUD1-205ENST00000562914 BAALCQ8WXS3 180 aa10.34□□□□□ -0.75
HERPUD1-205ENST00000562914 PLA2G2DQ9UNK4 145 aa10.34□□□□□ -0.75
HERPUD1-205ENST00000562914 GCGP01275 180 aa10.33□□□□□ -0.76
HERPUD1-205ENST00000562914 RNASE3P12724 160 aaKnown RBP10.33□□□□□ -0.76
HERPUD1-205ENST00000562914 SMUG1Q53HV7 270 aa10.33□□□□□ -0.76
HERPUD1-205ENST00000562914 CHCHD7Q9BUK0 85 aa10.33□□□□□ -0.76
HERPUD1-205ENST00000562914 PARLQ9H300 379 aa10.33□□□□□ -0.76
HERPUD1-205ENST00000562914 C11orf21Q9P2W6 132 aa10.33□□□□□ -0.76
HERPUD1-205ENST00000562914 GAGE12JA6NER3 117 aa10.32□□□□□ -0.76
HERPUD1-205ENST00000562914 MPC2O95563 127 aa10.32□□□□□ -0.76
HERPUD1-205ENST00000562914 TCRAP04437 139 aa10.32□□□□□ -0.76
HERPUD1-205ENST00000562914 ZNF80P51504 273 aaPredicted RBP10.32□□□□□ -0.76
HERPUD1-205ENST00000562914 GNG5P63218 68 aa10.32□□□□□ -0.76
HERPUD1-205ENST00000562914 GAGE1Q13065 139 aa10.32□□□□□ -0.76
HERPUD1-205ENST00000562914 GAGE4Q13068 117 aa10.32□□□□□ -0.76
HERPUD1-205ENST00000562914 GAGE5Q13069 117 aa10.32□□□□□ -0.76
HERPUD1-205ENST00000562914 ELOBQ15370 118 aa10.32□□□□□ -0.76
HERPUD1-205ENST00000562914 GAGE13Q4V321 117 aa10.32□□□□□ -0.76
HERPUD1-205ENST00000562914 SAPCD1Q5SSQ6 148 aa10.32□□□□□ -0.76
HERPUD1-205ENST00000562914 Q8N3U1 123 aa10.32□□□□□ -0.76
HERPUD1-205ENST00000562914 CIRBP-AS1Q8TBR5 109 aa10.32□□□□□ -0.76
HERPUD1-205ENST00000562914 HMCN2Q8NDA2 5059 aa10.32□□□□□ -0.76
HERPUD1-205ENST00000562914 RPL12P30050 165 aaKnown RBP10.31□□□□□ -0.76
HERPUD1-205ENST00000562914 C14orf177Q52M58 125 aa10.31□□□□□ -0.76
HERPUD1-205ENST00000562914 LINC00479Q96M42 142 aa10.31□□□□□ -0.76
HERPUD1-205ENST00000562914 PSG8Q9UQ74 426 aa10.31□□□□□ -0.76
HERPUD1-205ENST00000562914 IGKV2D-24A0A075B6R9 120 aa10.3□□□□□ -0.76
HERPUD1-205ENST00000562914 RHODO00212 210 aa10.3□□□□□ -0.76
HERPUD1-205ENST00000562914 IGLV2-11P01706 119 aa10.3□□□□□ -0.76
HERPUD1-205ENST00000562914 S100A4P26447 101 aaKnown RBP10.3□□□□□ -0.76
HERPUD1-205ENST00000562914 FLI1Q01543 452 aaPredicted RBP10.3□□□□□ -0.76
HERPUD1-205ENST00000562914 LINC01620Q4KN68 170 aa10.3□□□□□ -0.76
HERPUD1-205ENST00000562914 NIT1Q86X76 327 aa10.3□□□□□ -0.76
HERPUD1-205ENST00000562914 OR10G7Q8NGN6 311 aa10.3□□□□□ -0.76
HERPUD1-205ENST00000562914 SGK494Q96LW2 274 aa10.3□□□□□ -0.76
HERPUD1-205ENST00000562914 Q0VG73 95 aa10.29□□□□□ -0.76
HERPUD1-205ENST00000562914 LGALSLQ3ZCW2 172 aaPredicted RBP10.29□□□□□ -0.76
HERPUD1-205ENST00000562914 KCNIP4Q6PIL6 250 aa10.29□□□□□ -0.76
HERPUD1-205ENST00000562914 ATRAIDQ6UW56 229 aa10.29□□□□□ -0.76
HERPUD1-205ENST00000562914 TMEM75Q8N9X5 138 aa10.29□□□□□ -0.76
HERPUD1-205ENST00000562914 SUN5Q8TC36 379 aa10.29□□□□□ -0.76
HERPUD1-205ENST00000562914 SMIM3Q9BZL3 60 aa10.29□□□□□ -0.76
HERPUD1-205ENST00000562914 A0A087WX48 190 aa10.28□□□□□ -0.76
HERPUD1-205ENST00000562914 EIF3GO75821 320 aaKnown RBP eCLIP10.28□□□□□ -0.76
HERPUD1-205ENST00000562914 STAG3L2P0CL84 134 aa10.28□□□□□ -0.76
HERPUD1-205ENST00000562914 STAG3L3P0CL85 134 aa10.28□□□□□ -0.76
HERPUD1-205ENST00000562914 ARL14EPLP0DKL9 152 aa10.28□□□□□ -0.76
HERPUD1-205ENST00000562914 ASIPP42127 132 aa10.28□□□□□ -0.76
HERPUD1-205ENST00000562914 CDC34P49427 236 aaPredicted RBP10.28□□□□□ -0.76
HERPUD1-205ENST00000562914 RAB2AP61019 212 aa10.28□□□□□ -0.76
HERPUD1-205ENST00000562914 UFSP1Q6NVU6 142 aa10.28□□□□□ -0.76
HERPUD1-205ENST00000562914 OR2T35Q8NGX2 323 aa10.28□□□□□ -0.76
HERPUD1-205ENST00000562914 IL36BQ9NZH7 164 aa10.28□□□□□ -0.76
HERPUD1-205ENST00000562914 LRP1Q07954 4544 aaKnown RBP10.28□□□□□ -0.76
HERPUD1-205ENST00000562914 GIPP09681 153 aaPredicted RBP10.27□□□□□ -0.77
HERPUD1-205ENST00000562914 PRNTQ86SH4 94 aa10.27□□□□□ -0.77
HERPUD1-205ENST00000562914 TMEM167BQ9NRX6 74 aa10.27□□□□□ -0.77
HERPUD1-205ENST00000562914 KLK12Q9UKR0 248 aa10.27□□□□□ -0.77
HERPUD1-205ENST00000562914 EPDR1Q9UM22 224 aa10.27□□□□□ -0.77
HERPUD1-205ENST00000562914 FABP5P3A8MUU1 101 aa10.26□□□□□ -0.77
HERPUD1-205ENST00000562914 HMGB3O15347 200 aaKnown RBP10.26□□□□□ -0.77
HERPUD1-205ENST00000562914 SUMO1P63165 101 aaKnown RBP10.26□□□□□ -0.77
HERPUD1-205ENST00000562914 OR2G3Q8NGZ4 309 aa10.26□□□□□ -0.77
HERPUD1-205ENST00000562914 UBE2WQ96B02 151 aa10.26□□□□□ -0.77
HERPUD1-205ENST00000562914 SAMD10Q9BYL1 202 aa10.26□□□□□ -0.77
HERPUD1-205ENST00000562914 IGKV3D-20A0A0C4DH25 116 aa10.25□□□□□ -0.77
HERPUD1-205ENST00000562914 MBP02144 154 aa10.25□□□□□ -0.77
HERPUD1-205ENST00000562914 GCHFRP30047 84 aa10.25□□□□□ -0.77
HERPUD1-205ENST00000562914 RPL37AP61513 92 aaKnown RBP10.25□□□□□ -0.77
HERPUD1-205ENST00000562914 C14orf178Q8N769 122 aaPredicted RBP10.25□□□□□ -0.77
HERPUD1-205ENST00000562914 TRBV10-1A0A0K0K1A3 114 aa10.24□□□□□ -0.77
HERPUD1-205ENST00000562914 DNLZQ5SXM8 178 aa10.24□□□□□ -0.77
HERPUD1-205ENST00000562914 DMRTA1Q5VZB9 504 aa10.24□□□□□ -0.77
HERPUD1-205ENST00000562914 RAB24Q969Q5 203 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 105.4 ms