RNA–Protein interactions for RNA: ENST00000562626.1

CLK3-208, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 812 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-208ENST00000562626 APLNQ9ULZ1 77 aa6.87□□□□□ -1.31
CLK3-208ENST00000562626 IGHV4-4A0A075B6R2 117 aa6.86□□□□□ -1.31
CLK3-208ENST00000562626 MUC21A0A0G2JKD1 596 aa6.86□□□□□ -1.31
CLK3-208ENST00000562626 MUC21A0A140T8X8 626 aa6.86□□□□□ -1.31
CLK3-208ENST00000562626 TEX48A0A1B0GUV7 120 aa6.86□□□□□ -1.31
CLK3-208ENST00000562626 IGLL5B9A064 214 aa6.86□□□□□ -1.31
CLK3-208ENST00000562626 F5H768 121 aa6.86□□□□□ -1.31
CLK3-208ENST00000562626 M0R2P5 195 aa6.86□□□□□ -1.31
CLK3-208ENST00000562626 ASIPP42127 132 aa6.86□□□□□ -1.31
CLK3-208ENST00000562626 RAB14P61106 215 aa6.86□□□□□ -1.31
CLK3-208ENST00000562626 PEA15Q15121 130 aa6.86□□□□□ -1.31
CLK3-208ENST00000562626 LGALS9BQ3B8N2 356 aa6.86□□□□□ -1.31
CLK3-208ENST00000562626 TMEM88Q6PEY1 159 aa6.86□□□□□ -1.31
CLK3-208ENST00000562626 LINC01551Q86U37 167 aa6.86□□□□□ -1.31
CLK3-208ENST00000562626 SMIM12Q96EX1 92 aa6.86□□□□□ -1.31
CLK3-208ENST00000562626 C18orf15Q96N68 181 aa6.86□□□□□ -1.31
CLK3-208ENST00000562626 SPXQ9BT56 116 aa6.86□□□□□ -1.31
CLK3-208ENST00000562626 SCRT2Q9NQ03 307 aa6.86□□□□□ -1.31
CLK3-208ENST00000562626 DNAH6Q9C0G6 4158 aa6.86□□□□□ -1.31
CLK3-208ENST00000562626 HERC2O95714 4834 aa6.86□□□□□ -1.31
CLK3-208ENST00000562626 TRGV2A0A075B6R0 118 aa6.85□□□□□ -1.31
CLK3-208ENST00000562626 ATP5G1P05496 136 aa6.85□□□□□ -1.31
CLK3-208ENST00000562626 IGLC6P0CF74 106 aa6.85□□□□□ -1.31
CLK3-208ENST00000562626 RPL23P62829 140 aaKnown RBP6.85□□□□□ -1.31
CLK3-208ENST00000562626 FHL2Q14192 279 aa6.85□□□□□ -1.31
CLK3-208ENST00000562626 ZNF876PQ49A33 203 aa6.85□□□□□ -1.31
CLK3-208ENST00000562626 DMRTA1Q5VZB9 504 aa6.85□□□□□ -1.31
CLK3-208ENST00000562626 OR2D3Q8NGH3 330 aa6.85□□□□□ -1.31
CLK3-208ENST00000562626 OR10AG1Q8NH19 301 aa6.85□□□□□ -1.31
CLK3-208ENST00000562626 VSIG2Q96IQ7 327 aa6.85□□□□□ -1.31
CLK3-208ENST00000562626 SAMD10Q9BYL1 202 aa6.85□□□□□ -1.31
CLK3-208ENST00000562626 IL36BQ9NZH7 164 aa6.85□□□□□ -1.31
CLK3-208ENST00000562626 A0A0J9YY99 117 aa6.84□□□□□ -1.31
CLK3-208ENST00000562626 RS1O15537 224 aa6.84□□□□□ -1.31
CLK3-208ENST00000562626 SNAI2O43623 268 aa6.84□□□□□ -1.31
CLK3-208ENST00000562626 ATP6V1G1O75348 118 aa6.84□□□□□ -1.31
CLK3-208ENST00000562626 ADCYAP1P18509 176 aa6.84□□□□□ -1.31
CLK3-208ENST00000562626 S100A4P26447 101 aaKnown RBP6.84□□□□□ -1.31
CLK3-208ENST00000562626 CFAP126Q5VTH2 177 aa6.84□□□□□ -1.31
CLK3-208ENST00000562626 SSBP4Q9BWG4 385 aaPredicted RBP6.84□□□□□ -1.31
CLK3-208ENST00000562626 LY96Q9Y6Y9 160 aa6.84□□□□□ -1.31
CLK3-208ENST00000562626 TRAV26-1A0A087WT03 109 aa6.83□□□□□ -1.32
CLK3-208ENST00000562626 IGHV3-73A0A0B4J1V6 119 aa6.83□□□□□ -1.32
CLK3-208ENST00000562626 NXPH4O95158 308 aa6.83□□□□□ -1.32
CLK3-208ENST00000562626 P01737 135 aa6.83□□□□□ -1.32
CLK3-208ENST00000562626 CXCL1P09341 107 aa6.83□□□□□ -1.32
CLK3-208ENST00000562626 SSTP61278 116 aa6.83□□□□□ -1.32
CLK3-208ENST00000562626 Q6ZSN1 163 aa6.83□□□□□ -1.32
CLK3-208ENST00000562626 FAM231DQ6ZW35 169 aa6.83□□□□□ -1.32
CLK3-208ENST00000562626 COMMD7Q86VX2 200 aa6.83□□□□□ -1.32
CLK3-208ENST00000562626 GTSF1Q8WW33 167 aa6.83□□□□□ -1.32
CLK3-208ENST00000562626 PTH2Q96A98 100 aa6.83□□□□□ -1.32
CLK3-208ENST00000562626 ISOC2Q96AB3 205 aa6.83□□□□□ -1.32
CLK3-208ENST00000562626 SMDT1Q9H4I9 107 aa6.83□□□□□ -1.32
CLK3-208ENST00000562626 RPP21Q9H633 154 aaKnown RBP6.83□□□□□ -1.32
CLK3-208ENST00000562626 KMT2AQ03164 3969 aa6.82□□□□□ -1.32
CLK3-208ENST00000562626 TRAV4A0A0B4J268 109 aa6.82□□□□□ -1.32
CLK3-208ENST00000562626 LOC100131303A0A0U1RQF7 123 aa6.82□□□□□ -1.32
CLK3-208ENST00000562626 LINC00862A6NCI5 91 aa6.82□□□□□ -1.32
CLK3-208ENST00000562626 M0R381 172 aa6.82□□□□□ -1.32
CLK3-208ENST00000562626 MED14OSP0DP75 135 aa6.82□□□□□ -1.32
CLK3-208ENST00000562626 ADIRFQ15847 76 aa6.82□□□□□ -1.32
CLK3-208ENST00000562626 TMEM241Q24JQ0 296 aa6.82□□□□□ -1.32
CLK3-208ENST00000562626 SOHLH1Q5JUK2 328 aa6.82□□□□□ -1.32
CLK3-208ENST00000562626 UFSP1Q6NVU6 142 aa6.82□□□□□ -1.32
CLK3-208ENST00000562626 DAZAP1Q96EP5 407 aaKnown RBP6.82□□□□□ -1.32
CLK3-208ENST00000562626 MSRB1Q9NZV6 116 aa6.82□□□□□ -1.32
CLK3-208ENST00000562626 Q9UF83 564 aa6.82□□□□□ -1.32
CLK3-208ENST00000562626 NAT8Q9UHE5 227 aa6.82□□□□□ -1.32
CLK3-208ENST00000562626 KLK5Q9Y337 293 aaPredicted RBP6.82□□□□□ -1.32
CLK3-208ENST00000562626 A0A087WWL8 130 aa6.81□□□□□ -1.32
CLK3-208ENST00000562626 GATCO43716 136 aaKnown RBP6.81□□□□□ -1.32
CLK3-208ENST00000562626 OR5AL1P0C617 328 aa6.81□□□□□ -1.32
CLK3-208ENST00000562626 S100A1P23297 94 aa6.81□□□□□ -1.32
CLK3-208ENST00000562626 CRYBA4P53673 196 aa6.81□□□□□ -1.32
CLK3-208ENST00000562626 ERVFC1-1P60608 527 aa6.81□□□□□ -1.32
CLK3-208ENST00000562626 NDUFA5Q16718 116 aa6.81□□□□□ -1.32
CLK3-208ENST00000562626 FAM74A3Q4VXF1 159 aa6.81□□□□□ -1.32
CLK3-208ENST00000562626 LYZL1Q6UWQ5 148 aa6.81□□□□□ -1.32
CLK3-208ENST00000562626 OR4C5Q8NGB2 326 aa6.81□□□□□ -1.32
CLK3-208ENST00000562626 PHLDA3Q9Y5J5 127 aa6.81□□□□□ -1.32
CLK3-208ENST00000562626 V9GYV3 84 aa6.81□□□□□ -1.32
CLK3-208ENST00000562626 CRYGDP07320 174 aa6.8□□□□□ -1.32
CLK3-208ENST00000562626 GATA1P15976 413 aaPredicted RBP6.8□□□□□ -1.32
CLK3-208ENST00000562626 CTRLP40313 264 aa6.8□□□□□ -1.32
CLK3-208ENST00000562626 RPS20P60866 119 aaKnown RBP6.8□□□□□ -1.32
CLK3-208ENST00000562626 ZFP82Q8N141 532 aa6.8□□□□□ -1.32
CLK3-208ENST00000562626 FER1L6-AS1Q8NA97 138 aa6.8□□□□□ -1.32
CLK3-208ENST00000562626 LINC00476Q8WZB0 136 aa6.8□□□□□ -1.32
CLK3-208ENST00000562626 SFRP2Q96HF1 295 aa6.8□□□□□ -1.32
CLK3-208ENST00000562626 NDUFAF3Q9BU61 184 aa6.8□□□□□ -1.32
CLK3-208ENST00000562626 TPPP3Q9BW30 176 aa6.8□□□□□ -1.32
CLK3-208ENST00000562626 BIN3Q9NQY0 253 aa6.8□□□□□ -1.32
CLK3-208ENST00000562626 OSTCQ9NRP0 149 aa6.8□□□□□ -1.32
CLK3-208ENST00000562626 KIF25-AS1Q9Y6Z4 181 aa6.8□□□□□ -1.32
CLK3-208ENST00000562626 A0A096LPF7 62 aa6.79□□□□□ -1.32
CLK3-208ENST00000562626 TRGV4A0A0C4DH28 118 aa6.79□□□□□ -1.32
CLK3-208ENST00000562626 LCE6AA0A183 80 aa6.79□□□□□ -1.32
CLK3-208ENST00000562626 NUDT3O95989 172 aa6.79□□□□□ -1.32
CLK3-208ENST00000562626 LINC00315P59091 139 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 282.2 ms