RNA–Protein interactions for RNA: ENST00000562540.1

DENND4A-205, Transcript of DENN domain containing 4A, humanhuman

TSL 2

Gene DENND4A, Length 629 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4A-205ENST00000562540 TMEM128Q5BJH2 165 aa-0.17□□□□□ -2.44
DENND4A-205ENST00000562540 CCDC115Q96NT0 180 aa-0.17□□□□□ -2.44
DENND4A-205ENST00000562540 V9GYQ6 96 aa-0.17□□□□□ -2.44
DENND4A-205ENST00000562540 KIDINS220Q9ULH0 1771 aa-0.18□□□□□ -2.44
DENND4A-205ENST00000562540 TRAV12-2A0A075B6T6 113 aa-0.18□□□□□ -2.44
DENND4A-205ENST00000562540 TCRAP04437 139 aa-0.18□□□□□ -2.44
DENND4A-205ENST00000562540 COX6A2Q02221 97 aa-0.18□□□□□ -2.44
DENND4A-205ENST00000562540 SAMD13Q5VXD3 122 aa-0.18□□□□□ -2.44
DENND4A-205ENST00000562540 TOMM20LQ6UXN7 152 aa-0.18□□□□□ -2.44
DENND4A-205ENST00000562540 AKAP6Q13023 2319 aa-0.18□□□□□ -2.44
DENND4A-205ENST00000562540 CDK12Q9NYV4 1490 aaPredicted RBP-0.18□□□□□ -2.44
DENND4A-205ENST00000562540 CHD9Q3L8U1 2897 aa-0.19□□□□□ -2.44
DENND4A-205ENST00000562540 ZNF670-ZNF695F2Z2N8 137 aa-0.19□□□□□ -2.44
DENND4A-205ENST00000562540 OR2H2O95918 312 aa-0.19□□□□□ -2.44
DENND4A-205ENST00000562540 ELOF1P60002 83 aaKnown RBP-0.19□□□□□ -2.44
DENND4A-205ENST00000562540 PLGLB1Q02325 96 aa-0.19□□□□□ -2.44
DENND4A-205ENST00000562540 PPDPFLQ8WWR9 84 aa-0.19□□□□□ -2.44
DENND4A-205ENST00000562540 CENPHQ9H3R5 247 aa-0.19□□□□□ -2.44
DENND4A-205ENST00000562540 METTL1Q9UBP6 276 aaKnown RBP-0.19□□□□□ -2.44
DENND4A-205ENST00000562540 FLNCQ14315 2725 aa-0.2□□□□□ -2.44
DENND4A-205ENST00000562540 PTPRGP23470 1445 aa-0.2□□□□□ -2.44
DENND4A-205ENST00000562540 TFF1P04155 84 aa-0.2□□□□□ -2.44
DENND4A-205ENST00000562540 FABP1P07148 127 aa-0.2□□□□□ -2.44
DENND4A-205ENST00000562540 EMX2Q04743 252 aa-0.2□□□□□ -2.44
DENND4A-205ENST00000562540 HSD17B12Q53GQ0 312 aa-0.2□□□□□ -2.44
DENND4A-205ENST00000562540 SLC25A26Q70HW3 274 aa-0.2□□□□□ -2.44
DENND4A-205ENST00000562540 CALML5Q9NZT1 146 aa-0.2□□□□□ -2.44
DENND4A-205ENST00000562540 MED23Q9ULK4 1368 aa-0.2□□□□□ -2.44
DENND4A-205ENST00000562540 CXorf51AA0A1B0GTR3 108 aa-0.21□□□□□ -2.44
DENND4A-205ENST00000562540 S100GP29377 79 aa-0.21□□□□□ -2.44
DENND4A-205ENST00000562540 AKR1D1P51857 326 aa-0.21□□□□□ -2.44
DENND4A-205ENST00000562540 TFAMQ00059 246 aaKnown RBP-0.21□□□□□ -2.44
DENND4A-205ENST00000562540 BPESC1Q9GZL8 116 aa-0.21□□□□□ -2.44
DENND4A-205ENST00000562540 TAS2R8Q9NYW2 309 aa-0.21□□□□□ -2.44
DENND4A-205ENST00000562540 SMPXQ9UHP9 88 aa-0.21□□□□□ -2.44
DENND4A-205ENST00000562540 LRP5O75197 1615 aa-0.21□□□□□ -2.44
DENND4A-205ENST00000562540 SOGA1O94964 1423 aa-0.21□□□□□ -2.44
DENND4A-205ENST00000562540 FAM208BQ5VWN6 2430 aa-0.22□□□□□ -2.44
DENND4A-205ENST00000562540 PKDREJQ9NTG1 2253 aa-0.22□□□□□ -2.44
DENND4A-205ENST00000562540 PLCE1Q9P212 2302 aa-0.22□□□□□ -2.44
DENND4A-205ENST00000562540 PAEPP09466 180 aa-0.22□□□□□ -2.44
DENND4A-205ENST00000562540 XIRP1Q702N8 1843 aaKnown RBP-0.22□□□□□ -2.45
DENND4A-205ENST00000562540 TRAV2A0A0B4J234 112 aa-0.23□□□□□ -2.45
DENND4A-205ENST00000562540 RBAKDNA6NC62 111 aa-0.23□□□□□ -2.45
DENND4A-205ENST00000562540 SMIM24O75264 130 aa-0.23□□□□□ -2.45
DENND4A-205ENST00000562540 DPM2O94777 84 aa-0.23□□□□□ -2.45
DENND4A-205ENST00000562540 RPS28P62857 69 aaKnown RBP-0.23□□□□□ -2.45
DENND4A-205ENST00000562540 TMEM91Q6ZNR0 172 aa-0.23□□□□□ -2.45
DENND4A-205ENST00000562540 SLC35B3Q9H1N7 401 aa-0.23□□□□□ -2.45
DENND4A-205ENST00000562540 NDUFAF1Q9Y375 327 aa-0.23□□□□□ -2.45
DENND4A-205ENST00000562540 KIF13AQ9H1H9 1805 aa-0.23□□□□□ -2.45
DENND4A-205ENST00000562540 TCRBV3S1A0A5B6 114 aa-0.24□□□□□ -2.45
DENND4A-205ENST00000562540 IFITM1P13164 125 aa-0.24□□□□□ -2.45
DENND4A-205ENST00000562540 OR8B8Q15620 311 aa-0.24□□□□□ -2.45
DENND4A-205ENST00000562540 OR8I2Q8N0Y5 310 aa-0.24□□□□□ -2.45
DENND4A-205ENST00000562540 SKA2Q8WVK7 121 aaPredicted RBP-0.24□□□□□ -2.45
DENND4A-205ENST00000562540 PTPN13Q12923 2485 aa-0.24□□□□□ -2.45
DENND4A-205ENST00000562540 ZNF292O60281 2723 aa-0.24□□□□□ -2.45
DENND4A-205ENST00000562540 TNS1Q9HBL0 1735 aaKnown RBP-0.24□□□□□ -2.45
DENND4A-205ENST00000562540 VIRMAQ69YN4 1812 aaKnown RBP-0.24□□□□□ -2.45
DENND4A-205ENST00000562540 PLXNA2O75051 1894 aa-0.24□□□□□ -2.45
DENND4A-205ENST00000562540 C2CD3Q4AC94 2353 aa-0.25□□□□□ -2.45
DENND4A-205ENST00000562540 GVQW2A0A096LPI5 108 aaPredicted RBP-0.25□□□□□ -2.45
DENND4A-205ENST00000562540 A0A1B0GW64 132 aa-0.25□□□□□ -2.45
DENND4A-205ENST00000562540 MT-ND4LP03901 98 aa-0.25□□□□□ -2.45
DENND4A-205ENST00000562540 NMBP08949 121 aa-0.25□□□□□ -2.45
DENND4A-205ENST00000562540 SLC25A6P12236 298 aa-0.25□□□□□ -2.45
DENND4A-205ENST00000562540 TMEM244Q5VVB8 128 aa-0.25□□□□□ -2.45
DENND4A-205ENST00000562540 OR2T2Q6IF00 324 aa-0.25□□□□□ -2.45
DENND4A-205ENST00000562540 SMIM11BQ8TCY0 68 aa-0.25□□□□□ -2.45
DENND4A-205ENST00000562540 DYNLRB2Q8TF09 96 aa-0.25□□□□□ -2.45
DENND4A-205ENST00000562540 DDA1Q9BW61 102 aa-0.25□□□□□ -2.45
DENND4A-205ENST00000562540 DNAJC15Q9Y5T4 150 aa-0.25□□□□□ -2.45
DENND4A-205ENST00000562540 CDK13Q14004 1512 aaKnown RBP-0.25□□□□□ -2.45
DENND4A-205ENST00000562540 AKAP11Q9UKA4 1901 aa-0.25□□□□□ -2.45
DENND4A-205ENST00000562540 CASZ1Q86V15 1759 aa-0.26□□□□□ -2.45
DENND4A-205ENST00000562540 OVOS2A0A0G2JMS6 1433 aa-0.26□□□□□ -2.45
DENND4A-205ENST00000562540 J3KT08 172 aa-0.26□□□□□ -2.45
DENND4A-205ENST00000562540 RBP4P02753 201 aa-0.26□□□□□ -2.45
DENND4A-205ENST00000562540 APODP05090 189 aa-0.26□□□□□ -2.45
DENND4A-205ENST00000562540 COX4I1P13073 169 aa-0.26□□□□□ -2.45
DENND4A-205ENST00000562540 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa-0.26□□□□□ -2.45
DENND4A-205ENST00000562540 CYP2G1PQ6ZSU1 146 aa-0.26□□□□□ -2.45
DENND4A-205ENST00000562540 NDUFA11Q86Y39 141 aa-0.26□□□□□ -2.45
DENND4A-205ENST00000562540 SNX29P2Q8IUI4 249 aa-0.26□□□□□ -2.45
DENND4A-205ENST00000562540 NOP16Q9Y3C1 178 aaKnown RBP-0.26□□□□□ -2.45
DENND4A-205ENST00000562540 MYH13Q9UKX3 1938 aa-0.26□□□□□ -2.45
DENND4A-205ENST00000562540 PLXNA1Q9UIW2 1896 aa-0.27□□□□□ -2.45
DENND4A-205ENST00000562540 ARHGAP31Q2M1Z3 1444 aa-0.27□□□□□ -2.45
DENND4A-205ENST00000562540 CCDC171Q6TFL3 1326 aa-0.27□□□□□ -2.45
DENND4A-205ENST00000562540 BORCS7-ASMTA0A0B4J1R7 106 aa-0.27□□□□□ -2.45
DENND4A-205ENST00000562540 TSTD3H0UI37 97 aa-0.27□□□□□ -2.45
DENND4A-205ENST00000562540 HLA-DRB4P13762 266 aa-0.27□□□□□ -2.45
DENND4A-205ENST00000562540 SSBP1Q04837 148 aaKnown RBP-0.27□□□□□ -2.45
DENND4A-205ENST00000562540 SMIM15Q7Z3B0 74 aa-0.27□□□□□ -2.45
DENND4A-205ENST00000562540 ATP6V0E2Q8NHE4 81 aa-0.27□□□□□ -2.45
DENND4A-205ENST00000562540 IFI27L1Q96BM0 104 aa-0.27□□□□□ -2.45
DENND4A-205ENST00000562540 BANF2Q9H503 90 aa-0.27□□□□□ -2.45
DENND4A-205ENST00000562540 ERG28Q9UKR5 140 aa-0.27□□□□□ -2.45
DENND4A-205ENST00000562540 HSPB11Q9Y547 144 aa-0.27□□□□□ -2.45
Retrieved 100 of 20,778 RNA–protein pairs in 150.4 ms