RNA–Protein interactions for RNA: ENST00000562297.5

PKD1-225, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 2,040 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-225ENST00000562297 VAMP8Q9BV40 100 aa12.27□□□□□ -0.44
PKD1-225ENST00000562297 SCRT2Q9NQ03 307 aa12.27□□□□□ -0.44
PKD1-225ENST00000562297 JMJD1CQ15652 2540 aa12.27□□□□□ -0.45
PKD1-225ENST00000562297 TRAV12-3A0A0B4J271 114 aa12.27□□□□□ -0.45
PKD1-225ENST00000562297 TRAV25A0A0B4J276 109 aa12.27□□□□□ -0.45
PKD1-225ENST00000562297 MAP6D1Q9H9H5 199 aa12.27□□□□□ -0.45
PKD1-225ENST00000562297 VWFP04275 2813 aa12.26□□□□□ -0.45
PKD1-225ENST00000562297 KNCNA6PVL3 124 aa12.26□□□□□ -0.45
PKD1-225ENST00000562297 D6R8Y8 96 aa12.26□□□□□ -0.45
PKD1-225ENST00000562297 EREGO14944 169 aa12.26□□□□□ -0.45
PKD1-225ENST00000562297 GNRH2O43555 120 aa12.26□□□□□ -0.45
PKD1-225ENST00000562297 HLA-DRB4P13762 266 aa12.26□□□□□ -0.45
PKD1-225ENST00000562297 CDKN1BP46527 198 aa12.26□□□□□ -0.45
PKD1-225ENST00000562297 ZNF124Q15973 351 aa12.26□□□□□ -0.45
PKD1-225ENST00000562297 HLA-DRB4X5D2U9 266 aa12.26□□□□□ -0.45
PKD1-225ENST00000562297 TRAV12-2A0A075B6T6 113 aa12.25□□□□□ -0.45
PKD1-225ENST00000562297 MED14OSP0DP75 135 aa12.25□□□□□ -0.45
PKD1-225ENST00000562297 RNASE3P12724 160 aaKnown RBP12.25□□□□□ -0.45
PKD1-225ENST00000562297 RAB4AP20338 218 aa12.25□□□□□ -0.45
PKD1-225ENST00000562297 ASIPP42127 132 aa12.25□□□□□ -0.45
PKD1-225ENST00000562297 SPINK13Q1W4C9 94 aa12.25□□□□□ -0.45
PKD1-225ENST00000562297 C20orf144Q9BQM9 153 aa12.25□□□□□ -0.45
PKD1-225ENST00000562297 OR4C46A6NHA9 309 aa12.25□□□□□ -0.45
PKD1-225ENST00000562297 H3BMM0 161 aa12.25□□□□□ -0.45
PKD1-225ENST00000562297 CACNG7P62955 275 aa12.25□□□□□ -0.45
PKD1-225ENST00000562297 PMCHL1Q16048 86 aa12.25□□□□□ -0.45
PKD1-225ENST00000562297 EVI2AP22794 236 aa12.24□□□□□ -0.45
PKD1-225ENST00000562297 TSPOP30536 169 aa12.24□□□□□ -0.45
PKD1-225ENST00000562297 NSUN5P1Q3KNT7 163 aa12.24□□□□□ -0.45
PKD1-225ENST00000562297 ORMDL3Q8N138 153 aa12.24□□□□□ -0.45
PKD1-225ENST00000562297 RBMY1BA6NDE4 496 aaKnown RBP12.23□□□□□ -0.45
PKD1-225ENST00000562297 RBMY1EA6NEQ0 496 aaKnown RBP12.23□□□□□ -0.45
PKD1-225ENST00000562297 RBMY1DP0C7P1 496 aaKnown RBP12.23□□□□□ -0.45
PKD1-225ENST00000562297 CHCHD1Q96BP2 118 aaKnown RBP12.23□□□□□ -0.45
PKD1-225ENST00000562297 SPRY2O43597 315 aa12.23□□□□□ -0.45
PKD1-225ENST00000562297 S100A4P26447 101 aaKnown RBP12.23□□□□□ -0.45
PKD1-225ENST00000562297 ODF3L2Q3SX64 289 aa12.23□□□□□ -0.45
PKD1-225ENST00000562297 SPANXN1Q5VSR9 72 aa12.23□□□□□ -0.45
PKD1-225ENST00000562297 FAM159AQ6UWV7 190 aa12.23□□□□□ -0.45
PKD1-225ENST00000562297 ZNF705AQ6ZN79 300 aaPredicted RBP12.23□□□□□ -0.45
PKD1-225ENST00000562297 NDUFA11Q86Y39 141 aa12.23□□□□□ -0.45
PKD1-225ENST00000562297 PRELID3AQ96N28 172 aa12.23□□□□□ -0.45
PKD1-225ENST00000562297 LINC00614P0C842 121 aa12.22□□□□□ -0.45
PKD1-225ENST00000562297 ATRQ13535 2644 aa12.22□□□□□ -0.45
PKD1-225ENST00000562297 SMKR1H3BMG3 65 aa12.21□□□□□ -0.45
PKD1-225ENST00000562297 CRXO43186 299 aaPredicted RBP12.21□□□□□ -0.45
PKD1-225ENST00000562297 GAS8-AS1O95177 125 aa12.21□□□□□ -0.45
PKD1-225ENST00000562297 CKS2P33552 79 aa12.21□□□□□ -0.45
PKD1-225ENST00000562297 ATOH7Q8N100 152 aa12.21□□□□□ -0.45
PKD1-225ENST00000562297 TIMM8BQ9Y5J9 83 aaPredicted RBP12.21□□□□□ -0.45
PKD1-225ENST00000562297 TEP1Q99973 2627 aaKnown RBP12.21□□□□□ -0.45
PKD1-225ENST00000562297 NXPH4O95158 308 aa12.21□□□□□ -0.46
PKD1-225ENST00000562297 NCR2O95944 276 aa12.21□□□□□ -0.46
PKD1-225ENST00000562297 NUTF2P61970 127 aaKnown RBP12.21□□□□□ -0.46
PKD1-225ENST00000562297 MIEN1Q9BRT3 115 aa12.21□□□□□ -0.46
PKD1-225ENST00000562297 SNHG12Q9BXW3 62 aa12.21□□□□□ -0.46
PKD1-225ENST00000562297 PHLDA3Q9Y5J5 127 aa12.21□□□□□ -0.46
PKD1-225ENST00000562297 IGHV1-24A0A0C4DH33 117 aa12.2□□□□□ -0.46
PKD1-225ENST00000562297 TCAPO15273 167 aa12.2□□□□□ -0.46
PKD1-225ENST00000562297 NPYP01303 97 aa12.2□□□□□ -0.46
PKD1-225ENST00000562297 RBMY1A1P0DJD3 496 aaKnown RBP12.2□□□□□ -0.46
PKD1-225ENST00000562297 RBMY1CP0DJD4 496 aa12.2□□□□□ -0.46
PKD1-225ENST00000562297 RBMY1FQ15415 496 aaKnown RBP12.2□□□□□ -0.46
PKD1-225ENST00000562297 SPATA45Q537H7 98 aa12.2□□□□□ -0.46
PKD1-225ENST00000562297 SPATA12Q7Z6I5 190 aa12.2□□□□□ -0.46
PKD1-225ENST00000562297 M0R381 172 aa12.2□□□□□ -0.46
PKD1-225ENST00000562297 PPBPP02775 128 aa12.2□□□□□ -0.46
PKD1-225ENST00000562297 CD7P09564 240 aa12.2□□□□□ -0.46
PKD1-225ENST00000562297 IGHV3-16A0A0C4DH30 117 aa12.19□□□□□ -0.46
PKD1-225ENST00000562297 SAP30O75446 220 aa12.19□□□□□ -0.46
PKD1-225ENST00000562297 IGLV1-51P01701 117 aa12.19□□□□□ -0.46
PKD1-225ENST00000562297 FXYD7P58549 80 aa12.19□□□□□ -0.46
PKD1-225ENST00000562297 LINC00173Q6ZV60 143 aa12.19□□□□□ -0.46
PKD1-225ENST00000562297 IGHV1OR15-1A0A075B7D0 117 aa12.18□□□□□ -0.46
PKD1-225ENST00000562297 BTF3P20290 206 aaKnown RBP12.18□□□□□ -0.46
PKD1-225ENST00000562297 MAJINQ3KP22 176 aa12.18□□□□□ -0.46
PKD1-225ENST00000562297 Q8N1Y9 231 aa12.18□□□□□ -0.46
PKD1-225ENST00000562297 IFI27P40305 119 aaPredicted RBP12.18□□□□□ -0.46
PKD1-225ENST00000562297 SMIM15Q7Z3B0 74 aa12.18□□□□□ -0.46
PKD1-225ENST00000562297 C9orf85Q96MD7 179 aa12.18□□□□□ -0.46
PKD1-225ENST00000562297 CLUHP3Q96NS8 147 aa12.18□□□□□ -0.46
PKD1-225ENST00000562297 M0R143 59 aa12.17□□□□□ -0.46
PKD1-225ENST00000562297 GATA1P15976 413 aaPredicted RBP12.17□□□□□ -0.46
PKD1-225ENST00000562297 AP5S1Q9NUS5 200 aa12.17□□□□□ -0.46
PKD1-225ENST00000562297 MDFICQ9P1T7 246 aa12.17□□□□□ -0.46
PKD1-225ENST00000562297 LAMTOR2Q9Y2Q5 125 aa12.17□□□□□ -0.46
PKD1-225ENST00000562297 LOC389332A0A1B0GUA5 103 aa12.16□□□□□ -0.46
PKD1-225ENST00000562297 MRPL52Q86TS9 123 aaKnown RBP12.16□□□□□ -0.46
PKD1-225ENST00000562297 LINC00482Q8N8I6 264 aa12.16□□□□□ -0.46
PKD1-225ENST00000562297 PRSS3P2Q8NHM4 247 aa12.16□□□□□ -0.46
PKD1-225ENST00000562297 NOTCH3Q9UM47 2321 aa12.15□□□□□ -0.46
PKD1-225ENST00000562297 TRAV26-2A0A0B4J265 109 aa12.15□□□□□ -0.46
PKD1-225ENST00000562297 TNFRSF6BO95407 300 aa12.15□□□□□ -0.46
PKD1-225ENST00000562297 NRACQ8N912 160 aa12.15□□□□□ -0.46
PKD1-225ENST00000562297 TRRAPQ9Y4A5 3859 aa12.15□□□□□ -0.46
PKD1-225ENST00000562297 OR11H12B2RN74 326 aa12.15□□□□□ -0.47
PKD1-225ENST00000562297 FA2HQ7L5A8 372 aa12.15□□□□□ -0.47
PKD1-225ENST00000562297 C14orf178Q8N769 122 aaPredicted RBP12.15□□□□□ -0.47
PKD1-225ENST00000562297 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.15□□□□□ -0.47
PKD1-225ENST00000562297 TMEM70Q9BUB7 260 aa12.15□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms