RNA–Protein interactions for RNA: ENST00000561976.5

VPS9D1-202, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-202ENST00000561976 PRO0461Q9UI25 63 aa10.6□□□□□ -0.71
VPS9D1-202ENST00000561976 ARL3P36405 182 aa10.6□□□□□ -0.71
VPS9D1-202ENST00000561976 ITLN2Q8WWU7 325 aaPredicted RBP10.6□□□□□ -0.71
VPS9D1-202ENST00000561976 HRNRQ86YZ3 2850 aaPredicted RBP10.6□□□□□ -0.71
VPS9D1-202ENST00000561976 IGKV3-7A0A075B6H7 116 aa10.6□□□□□ -0.71
VPS9D1-202ENST00000561976 LOC107984156A0A0G2JMH3 177 aa10.6□□□□□ -0.71
VPS9D1-202ENST00000561976 LINC01549A6NIU2 74 aa10.6□□□□□ -0.71
VPS9D1-202ENST00000561976 APOMO95445 188 aa10.6□□□□□ -0.71
VPS9D1-202ENST00000561976 ARL17AQ8IVW1 177 aa10.6□□□□□ -0.71
VPS9D1-202ENST00000561976 SPATA25Q9BR10 227 aa10.6□□□□□ -0.71
VPS9D1-202ENST00000561976 SVEP1Q4LDE5 3571 aa10.59□□□□□ -0.71
VPS9D1-202ENST00000561976 ADORA2A-AS1P86434 159 aa10.59□□□□□ -0.71
VPS9D1-202ENST00000561976 DEFB104AQ8WTQ1 72 aa10.59□□□□□ -0.71
VPS9D1-202ENST00000561976 PLEKHB2Q96CS7 222 aa10.59□□□□□ -0.71
VPS9D1-202ENST00000561976 ASH1LQ9NR48 2969 aaKnown RBP10.59□□□□□ -0.71
VPS9D1-202ENST00000561976 TRAV41A0A0B4J266 112 aa10.59□□□□□ -0.71
VPS9D1-202ENST00000561976 OVOL1O14753 267 aa10.59□□□□□ -0.71
VPS9D1-202ENST00000561976 GNRH2O43555 120 aa10.59□□□□□ -0.71
VPS9D1-202ENST00000561976 C5orf56Q8N8D9 126 aa10.59□□□□□ -0.71
VPS9D1-202ENST00000561976 PTPRQQ9UMZ3 2332 aa10.58□□□□□ -0.72
VPS9D1-202ENST00000561976 UNQ9165/PRO28630Q6UXU0 137 aa10.58□□□□□ -0.72
VPS9D1-202ENST00000561976 KLHL30-AS1Q8NEE0 82 aa10.58□□□□□ -0.72
VPS9D1-202ENST00000561976 F6UB75 175 aa10.58□□□□□ -0.72
VPS9D1-202ENST00000561976 PSMB2P49721 201 aa10.58□□□□□ -0.72
VPS9D1-202ENST00000561976 EMP1P54849 157 aa10.58□□□□□ -0.72
VPS9D1-202ENST00000561976 DLX4Q92988 240 aaPredicted RBP10.58□□□□□ -0.72
VPS9D1-202ENST00000561976 MUC6Q6W4X9 2439 aa10.58□□□□□ -0.72
VPS9D1-202ENST00000561976 NPFFO15130 113 aa10.57□□□□□ -0.72
VPS9D1-202ENST00000561976 DUSP14O95147 198 aaKnown RBP10.57□□□□□ -0.72
VPS9D1-202ENST00000561976 RNF223E7ERA6 249 aa10.57□□□□□ -0.72
VPS9D1-202ENST00000561976 IGHV3OR16-10A0A075B7F0 116 aa10.56□□□□□ -0.72
VPS9D1-202ENST00000561976 PPP1R17O96001 155 aa10.56□□□□□ -0.72
VPS9D1-202ENST00000561976 TRBV12-3P01733 135 aa10.56□□□□□ -0.72
VPS9D1-202ENST00000561976 GPHB5Q86YW7 130 aa10.56□□□□□ -0.72
VPS9D1-202ENST00000561976 FAM223BA6NKX1 122 aa10.56□□□□□ -0.72
VPS9D1-202ENST00000561976 FAM223AQ8IWN6 122 aa10.56□□□□□ -0.72
VPS9D1-202ENST00000561976 ATP6V0BQ99437 205 aa10.56□□□□□ -0.72
VPS9D1-202ENST00000561976 HERVK_113P61574 105 aa10.55□□□□□ -0.72
VPS9D1-202ENST00000561976 ZNF418Q8TF45 676 aaPredicted RBP10.55□□□□□ -0.72
VPS9D1-202ENST00000561976 TP53TG1Q9Y2A0 90 aa10.55□□□□□ -0.72
VPS9D1-202ENST00000561976 C11orf86A6NJI1 115 aa10.55□□□□□ -0.72
VPS9D1-202ENST00000561976 UBTD1Q9HAC8 227 aa10.55□□□□□ -0.72
VPS9D1-202ENST00000561976 TSPAN13O95857 204 aa10.54□□□□□ -0.72
VPS9D1-202ENST00000561976 RNASE3P12724 160 aaKnown RBP10.54□□□□□ -0.72
VPS9D1-202ENST00000561976 COX6B1P14854 86 aa10.54□□□□□ -0.72
VPS9D1-202ENST00000561976 FOXI1Q12951 378 aa10.54□□□□□ -0.72
VPS9D1-202ENST00000561976 CFAP126Q5VTH2 177 aa10.54□□□□□ -0.72
VPS9D1-202ENST00000561976 ZFP2Q6ZN57 461 aa10.54□□□□□ -0.72
VPS9D1-202ENST00000561976 C1QTNF4Q9BXJ3 329 aa10.54□□□□□ -0.72
VPS9D1-202ENST00000561976 MOB4Q9Y3A3 225 aa10.54□□□□□ -0.72
VPS9D1-202ENST00000561976 A0A1W2PPR1 153 aa10.54□□□□□ -0.72
VPS9D1-202ENST00000561976 IGHV3-11P01762 117 aa10.54□□□□□ -0.72
VPS9D1-202ENST00000561976 CRYGDP07320 174 aa10.54□□□□□ -0.72
VPS9D1-202ENST00000561976 MED14OSP0DP75 135 aa10.54□□□□□ -0.72
VPS9D1-202ENST00000561976 UBE2D1P51668 147 aa10.54□□□□□ -0.72
VPS9D1-202ENST00000561976 BPESC1Q9GZL8 116 aa10.54□□□□□ -0.72
VPS9D1-202ENST00000561976 TRAV26-1A0A087WT03 109 aa10.53□□□□□ -0.72
VPS9D1-202ENST00000561976 F5H697 171 aa10.53□□□□□ -0.72
VPS9D1-202ENST00000561976 NDUFA4O00483 81 aa10.53□□□□□ -0.72
VPS9D1-202ENST00000561976 SOCS3O14543 225 aa10.53□□□□□ -0.72
VPS9D1-202ENST00000561976 CRYBA4P53673 196 aa10.53□□□□□ -0.72
VPS9D1-202ENST00000561976 SYT8Q8NBV8 401 aa10.53□□□□□ -0.72
VPS9D1-202ENST00000561976 SMCPP49901 116 aaPredicted RBP10.53□□□□□ -0.72
VPS9D1-202ENST00000561976 PAPPA-AS1Q5QFB9 102 aa10.53□□□□□ -0.72
VPS9D1-202ENST00000561976 AKAP6Q13023 2319 aa10.52□□□□□ -0.72
VPS9D1-202ENST00000561976 TMEM170BQ5T4T1 132 aa10.52□□□□□ -0.73
VPS9D1-202ENST00000561976 IGLV4-69A0A075B6H9 119 aa10.52□□□□□ -0.73
VPS9D1-202ENST00000561976 TSHBP01222 138 aa10.52□□□□□ -0.73
VPS9D1-202ENST00000561976 NBL1P41271 181 aa10.52□□□□□ -0.73
VPS9D1-202ENST00000561976 LMO4P61968 165 aa10.52□□□□□ -0.73
VPS9D1-202ENST00000561976 RPL39P62891 51 aaKnown RBP10.52□□□□□ -0.73
VPS9D1-202ENST00000561976 PMVKQ15126 192 aa10.52□□□□□ -0.73
VPS9D1-202ENST00000561976 LYRM7Q5U5X0 104 aa10.52□□□□□ -0.73
VPS9D1-202ENST00000561976 JPT2Q9H910 190 aa10.52□□□□□ -0.73
VPS9D1-202ENST00000561976 A0A087WWL8 130 aa10.51□□□□□ -0.73
VPS9D1-202ENST00000561976 IGHV1-69DA0A0B4J2H0 117 aa10.51□□□□□ -0.73
VPS9D1-202ENST00000561976 A0A0J9YY99 117 aa10.51□□□□□ -0.73
VPS9D1-202ENST00000561976 SRD5A1P18405 259 aa10.51□□□□□ -0.73
VPS9D1-202ENST00000561976 PTH2Q96A98 100 aa10.51□□□□□ -0.73
VPS9D1-202ENST00000561976 KIR2DL4Q99706 377 aa10.51□□□□□ -0.73
VPS9D1-202ENST00000561976 CD7P09564 240 aa10.51□□□□□ -0.73
VPS9D1-202ENST00000561976 CKS1BP61024 79 aa10.51□□□□□ -0.73
VPS9D1-202ENST00000561976 FAM159AQ6UWV7 190 aa10.51□□□□□ -0.73
VPS9D1-202ENST00000561976 NDUFA11Q86Y39 141 aa10.51□□□□□ -0.73
VPS9D1-202ENST00000561976 ATP6V0E2Q8NHE4 81 aa10.51□□□□□ -0.73
VPS9D1-202ENST00000561976 TGFAP01135 160 aa10.5□□□□□ -0.73
VPS9D1-202ENST00000561976 BRD3OSQ6XYD6 125 aa10.5□□□□□ -0.73
VPS9D1-202ENST00000561976 NFE4Q86UQ8 179 aa10.5□□□□□ -0.73
VPS9D1-202ENST00000561976 FAM19A4Q96LR4 140 aa10.5□□□□□ -0.73
VPS9D1-202ENST00000561976 IGIPA6NJ69 53 aa10.5□□□□□ -0.73
VPS9D1-202ENST00000561976 SUMO4Q6EEV6 95 aa10.5□□□□□ -0.73
VPS9D1-202ENST00000561976 RHPN1-AS1Q9BWJ2 59 aa10.5□□□□□ -0.73
VPS9D1-202ENST00000561976 VCYO14598 125 aa10.49□□□□□ -0.73
VPS9D1-202ENST00000561976 PF4V1P10720 104 aa10.49□□□□□ -0.73
VPS9D1-202ENST00000561976 LY6EQ16553 131 aa10.49□□□□□ -0.73
VPS9D1-202ENST00000561976 C19orf54Q5BKX5 351 aa10.49□□□□□ -0.73
VPS9D1-202ENST00000561976 Q6ZS46 218 aa10.49□□□□□ -0.73
VPS9D1-202ENST00000561976 COL6A6A6NMZ7 2263 aa10.49□□□□□ -0.73
VPS9D1-202ENST00000561976 SCGB1C2P0DMR2 95 aa10.49□□□□□ -0.73
VPS9D1-202ENST00000561976 LINC00315P59091 139 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms