RNA–Protein interactions for RNA: ENST00000561623.5

GTF3C1-202, Transcript of general transcription factor IIIC subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GTF3C1, Length 7,015 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-202ENST00000561623 A4D1N5 150 aa8.01□□□□□ -1.13
GTF3C1-202ENST00000561623 C11orf53Q8IXP5 236 aa8.01□□□□□ -1.13
GTF3C1-202ENST00000561623 TP73-AS1Q9UF72 201 aa8.01□□□□□ -1.13
GTF3C1-202ENST00000561623 CRYGCP07315 174 aa8□□□□□ -1.13
GTF3C1-202ENST00000561623 RMI2Q96E14 147 aa8□□□□□ -1.13
GTF3C1-202ENST00000561623 IGKV3D-7A0A0C4DH55 119 aa8□□□□□ -1.13
GTF3C1-202ENST00000561623 NDUFA4O00483 81 aa8□□□□□ -1.13
GTF3C1-202ENST00000561623 HERVK_113P63121 156 aa8□□□□□ -1.13
GTF3C1-202ENST00000561623 TEN1Q86WV5 123 aa8□□□□□ -1.13
GTF3C1-202ENST00000561623 LYPD6Q86Y78 171 aa8□□□□□ -1.13
GTF3C1-202ENST00000561623 RITA1Q96K30 269 aa8□□□□□ -1.13
GTF3C1-202ENST00000561623 ZNF407Q9C0G0 2248 aa8□□□□□ -1.13
GTF3C1-202ENST00000561623 NLRC5Q86WI3 1866 aa8□□□□□ -1.13
GTF3C1-202ENST00000561623 A0A096LPF7 62 aa8□□□□□ -1.13
GTF3C1-202ENST00000561623 INAFM1C9JVW0 142 aa8□□□□□ -1.13
GTF3C1-202ENST00000561623 MRPL23Q16540 153 aaKnown RBP8□□□□□ -1.13
GTF3C1-202ENST00000561623 PTH2Q96A98 100 aa7.99□□□□□ -1.13
GTF3C1-202ENST00000561623 C4orf48Q5BLP8 95 aa7.99□□□□□ -1.13
GTF3C1-202ENST00000561623 DENND4AQ7Z401 1863 aa7.99□□□□□ -1.13
GTF3C1-202ENST00000561623 ICOSQ9Y6W8 199 aa7.99□□□□□ -1.13
GTF3C1-202ENST00000561623 LRCOL1A6NCL2 159 aa7.99□□□□□ -1.13
GTF3C1-202ENST00000561623 UBE2BP63146 152 aa7.99□□□□□ -1.13
GTF3C1-202ENST00000561623 Q6ZS92 163 aa7.99□□□□□ -1.13
GTF3C1-202ENST00000561623 LY6G6EA0A0G2JKS1 128 aa7.98□□□□□ -1.13
GTF3C1-202ENST00000561623 U3KQA8 63 aa7.98□□□□□ -1.13
GTF3C1-202ENST00000561623 ZNF561-AS1K7EIQ3 104 aa7.98□□□□□ -1.13
GTF3C1-202ENST00000561623 IGLV1-44P01699 117 aa7.98□□□□□ -1.13
GTF3C1-202ENST00000561623 DAND5Q8N907 189 aa7.98□□□□□ -1.13
GTF3C1-202ENST00000561623 DEFB105AQ8NG35 78 aa7.98□□□□□ -1.13
GTF3C1-202ENST00000561623 BDP1A6H8Y1 2624 aa7.98□□□□□ -1.13
GTF3C1-202ENST00000561623 RBAKDNA6NC62 111 aa7.98□□□□□ -1.13
GTF3C1-202ENST00000561623 SPATA12Q7Z6I5 190 aa7.98□□□□□ -1.13
GTF3C1-202ENST00000561623 FAM167A-AS1Q96KT0 104 aa7.98□□□□□ -1.13
GTF3C1-202ENST00000561623 LINC01619G3V211 115 aa7.97□□□□□ -1.13
GTF3C1-202ENST00000561623 LINC01620Q4KN68 170 aa7.97□□□□□ -1.13
GTF3C1-202ENST00000561623 WDR81Q562E7 1941 aa7.97□□□□□ -1.13
GTF3C1-202ENST00000561623 LY6G6CO95867 125 aa7.97□□□□□ -1.13
GTF3C1-202ENST00000561623 IGHV7-4-1A0A0J9YVY3 117 aa7.97□□□□□ -1.13
GTF3C1-202ENST00000561623 THSD7BQ9C0I4 1608 aa7.97□□□□□ -1.13
GTF3C1-202ENST00000561623 IGHV1-69DA0A0B4J2H0 117 aa7.97□□□□□ -1.13
GTF3C1-202ENST00000561623 A0A0J9YXV3 536 aa7.97□□□□□ -1.13
GTF3C1-202ENST00000561623 A0A1B0GX51 115 aa7.97□□□□□ -1.13
GTF3C1-202ENST00000561623 IGHV1-69P01742 117 aa7.97□□□□□ -1.13
GTF3C1-202ENST00000561623 CCL18P55774 89 aa7.97□□□□□ -1.13
GTF3C1-202ENST00000561623 RPL39P62891 51 aaKnown RBP7.97□□□□□ -1.13
GTF3C1-202ENST00000561623 C9orf66Q5T8R8 295 aa7.97□□□□□ -1.13
GTF3C1-202ENST00000561623 MRPL53Q96EL3 112 aaKnown RBP7.97□□□□□ -1.13
GTF3C1-202ENST00000561623 PTPN13Q12923 2485 aa7.97□□□□□ -1.13
GTF3C1-202ENST00000561623 ORMDL1Q9P0S3 153 aa7.96□□□□□ -1.13
GTF3C1-202ENST00000561623 IGLV2-14P01704 120 aa7.96□□□□□ -1.13
GTF3C1-202ENST00000561623 RHOHQ15669 191 aa7.96□□□□□ -1.13
GTF3C1-202ENST00000561623 HIGD1BQ9P298 99 aa7.96□□□□□ -1.13
GTF3C1-202ENST00000561623 CLEC2BQ92478 149 aa7.96□□□□□ -1.14
GTF3C1-202ENST00000561623 CTSZQ9UBR2 303 aa7.96□□□□□ -1.14
GTF3C1-202ENST00000561623 ZFP2Q6ZN57 461 aa7.96□□□□□ -1.14
GTF3C1-202ENST00000561623 WFDC9Q8NEX5 89 aa7.96□□□□□ -1.14
GTF3C1-202ENST00000561623 SONP18583 2426 aaKnown RBP7.96□□□□□ -1.14
GTF3C1-202ENST00000561623 ACYP1P07311 99 aa7.96□□□□□ -1.14
GTF3C1-202ENST00000561623 NKAPP1Q8N9T2 125 aa7.96□□□□□ -1.14
GTF3C1-202ENST00000561623 XCL1P47992 114 aa7.95□□□□□ -1.14
GTF3C1-202ENST00000561623 ARHGAP21Q5T5U3 1957 aa7.95□□□□□ -1.14
GTF3C1-202ENST00000561623 C2orf70A6NJV1 201 aa7.95□□□□□ -1.14
GTF3C1-202ENST00000561623 F8W735 103 aaPredicted RBP7.95□□□□□ -1.14
GTF3C1-202ENST00000561623 IGKV1OR2-108A0A075B7D4 117 aa7.95□□□□□ -1.14
GTF3C1-202ENST00000561623 I3L2K1 104 aa7.95□□□□□ -1.14
GTF3C1-202ENST00000561623 LOXL1Q08397 574 aaPredicted RBP7.95□□□□□ -1.14
GTF3C1-202ENST00000561623 C11orf1Q9H5F2 150 aa7.95□□□□□ -1.14
GTF3C1-202ENST00000561623 ZFHX2Q9C0A1 2572 aaPredicted RBP7.95□□□□□ -1.14
GTF3C1-202ENST00000561623 IGHV4-4A0A075B6R2 117 aa7.95□□□□□ -1.14
GTF3C1-202ENST00000561623 A0A0B4J2C4 111 aa7.95□□□□□ -1.14
GTF3C1-202ENST00000561623 IGKV2D-24A0A075B6R9 120 aa7.94□□□□□ -1.14
GTF3C1-202ENST00000561623 C14orf132Q9NPU4 83 aa7.94□□□□□ -1.14
GTF3C1-202ENST00000561623 FRMPD3Q5JV73 1810 aa7.94□□□□□ -1.14
GTF3C1-202ENST00000561623 PRAC2D3DTV9 90 aa7.94□□□□□ -1.14
GTF3C1-202ENST00000561623 J3QLI3 93 aa7.94□□□□□ -1.14
GTF3C1-202ENST00000561623 J3KT08 172 aa7.94□□□□□ -1.14
GTF3C1-202ENST00000561623 ODF1Q14990 250 aa7.94□□□□□ -1.14
GTF3C1-202ENST00000561623 K7EIM0 57 aa7.94□□□□□ -1.14
GTF3C1-202ENST00000561623 IGKV1-17P01599 117 aa7.94□□□□□ -1.14
GTF3C1-202ENST00000561623 KRTAP27-1Q3LI81 207 aa7.94□□□□□ -1.14
GTF3C1-202ENST00000561623 IGHV4-28A0A0C4DH34 117 aa7.93□□□□□ -1.14
GTF3C1-202ENST00000561623 C8orf31Q8N9H6 132 aa7.93□□□□□ -1.14
GTF3C1-202ENST00000561623 SMAD5-AS1Q9Y6J3 95 aa7.93□□□□□ -1.14
GTF3C1-202ENST00000561623 EML6Q6ZMW3 1958 aa7.93□□□□□ -1.14
GTF3C1-202ENST00000561623 SLC25A29Q8N8R3 303 aa7.93□□□□□ -1.14
GTF3C1-202ENST00000561623 CACNA1HO95180 2353 aa7.93□□□□□ -1.14
GTF3C1-202ENST00000561623 U3KQE9 123 aa7.93□□□□□ -1.14
GTF3C1-202ENST00000561623 ANGP03950 147 aaKnown RBP7.93□□□□□ -1.14
GTF3C1-202ENST00000561623 TIMM17AQ99595 171 aa7.93□□□□□ -1.14
GTF3C1-202ENST00000561623 MRPL36Q9P0J6 103 aaKnown RBP7.93□□□□□ -1.14
GTF3C1-202ENST00000561623 IGHG2P01859 326 aa7.93□□□□□ -1.14
GTF3C1-202ENST00000561623 C5orf38Q86SI9 138 aa7.93□□□□□ -1.14
GTF3C1-202ENST00000561623 MT-ATP8P03928 68 aa7.92□□□□□ -1.14
GTF3C1-202ENST00000561623 SRSF2Q01130 221 aaKnown RBP7.92□□□□□ -1.14
GTF3C1-202ENST00000561623 ODF3L1Q8IXM7 274 aa7.92□□□□□ -1.14
GTF3C1-202ENST00000561623 PIFOQ8TCI5 191 aa7.92□□□□□ -1.14
GTF3C1-202ENST00000561623 E7EUB6 86 aa7.92□□□□□ -1.14
GTF3C1-202ENST00000561623 ATOX1O00244 68 aa7.92□□□□□ -1.14
GTF3C1-202ENST00000561623 GDF5OSQ5U4N7 250 aa7.92□□□□□ -1.14
GTF3C1-202ENST00000561623 HOXB4P17483 251 aaPredicted RBP7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms