RNA–Protein interactions for RNA: ENST00000561514.1

PALB2-202, Transcript of partner and localizer of BRCA2, humanhuman

TSL 5

Gene PALB2, Length 815 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-202ENST00000561514 K7EQG2 157 aa6.08□□□□□ -1.44
PALB2-202ENST00000561514 HLA-DQA1P01909 254 aa6.08□□□□□ -1.44
PALB2-202ENST00000561514 RBMY1A1P0DJD3 496 aaKnown RBP6.08□□□□□ -1.44
PALB2-202ENST00000561514 RBMY1CP0DJD4 496 aa6.08□□□□□ -1.44
PALB2-202ENST00000561514 MIFP14174 115 aa6.08□□□□□ -1.44
PALB2-202ENST00000561514 DEFB131AP59861 70 aa6.08□□□□□ -1.44
PALB2-202ENST00000561514 UBE2G1P62253 170 aa6.08□□□□□ -1.44
PALB2-202ENST00000561514 RBMY1FQ15415 496 aaKnown RBP6.08□□□□□ -1.44
PALB2-202ENST00000561514 PHLDA2Q53GA4 152 aa6.08□□□□□ -1.44
PALB2-202ENST00000561514 MORN3Q6PF18 240 aaPredicted RBP6.08□□□□□ -1.44
PALB2-202ENST00000561514 LCN15Q6UWW0 184 aa6.08□□□□□ -1.44
PALB2-202ENST00000561514 LINC00336Q6ZUF6 198 aa6.08□□□□□ -1.44
PALB2-202ENST00000561514 H2BFWTQ7Z2G1 175 aa6.08□□□□□ -1.44
PALB2-202ENST00000561514 TBC1D26Q86UD7 250 aa6.08□□□□□ -1.44
PALB2-202ENST00000561514 CSNK1G2-AS1Q8NCQ2 148 aa6.08□□□□□ -1.44
PALB2-202ENST00000561514 OR4A16Q8NH70 328 aa6.08□□□□□ -1.44
PALB2-202ENST00000561514 DCANP1Q8TF63 244 aa6.08□□□□□ -1.44
PALB2-202ENST00000561514 ANAPC13Q9BS18 74 aa6.08□□□□□ -1.44
PALB2-202ENST00000561514 C1QTNF4Q9BXJ3 329 aa6.08□□□□□ -1.44
PALB2-202ENST00000561514 C11orf1Q9H5F2 150 aa6.08□□□□□ -1.44
PALB2-202ENST00000561514 TP53TG3Q9ULZ0 132 aa6.08□□□□□ -1.44
PALB2-202ENST00000561514 SPCS1Q9Y6A9 102 aa6.08□□□□□ -1.44
PALB2-202ENST00000561514 U3KQE9 123 aa6.08□□□□□ -1.44
PALB2-202ENST00000561514 X6R8D5 127 aa6.08□□□□□ -1.44
PALB2-202ENST00000561514 MUC21A0A0G2JKD1 596 aa6.07□□□□□ -1.44
PALB2-202ENST00000561514 MUC21A0A140T8X8 626 aa6.07□□□□□ -1.44
PALB2-202ENST00000561514 A0A1W2PPM0 123 aa6.07□□□□□ -1.44
PALB2-202ENST00000561514 EIF4EBP3O60516 100 aaPredicted RBP6.07□□□□□ -1.44
PALB2-202ENST00000561514 IGKV1-17P01599 117 aa6.07□□□□□ -1.44
PALB2-202ENST00000561514 IGKV1-5P01602 117 aa6.07□□□□□ -1.44
PALB2-202ENST00000561514 OR5AL1P0C617 328 aa6.07□□□□□ -1.44
PALB2-202ENST00000561514 RNASE2P10153 161 aaKnown RBP6.07□□□□□ -1.44
PALB2-202ENST00000561514 LINC00310P59036 64 aa6.07□□□□□ -1.44
PALB2-202ENST00000561514 ERHP84090 104 aaKnown RBP6.07□□□□□ -1.44
PALB2-202ENST00000561514 MUC21Q5SSG8 566 aa6.07□□□□□ -1.44
PALB2-202ENST00000561514 FNDC4Q9H6D8 234 aaPredicted RBP6.07□□□□□ -1.44
PALB2-202ENST00000561514 NAA60Q9H7X0 242 aa6.07□□□□□ -1.44
PALB2-202ENST00000561514 IL36BQ9NZH7 164 aa6.07□□□□□ -1.44
PALB2-202ENST00000561514 SS18L2Q9UHA2 77 aa6.07□□□□□ -1.44
PALB2-202ENST00000561514 RFNGQ9Y644 331 aa6.07□□□□□ -1.44
PALB2-202ENST00000561514 LRP1BQ9NZR2 4599 aa6.07□□□□□ -1.44
PALB2-202ENST00000561514 HSPG2P98160 4391 aa6.06□□□□□ -1.44
PALB2-202ENST00000561514 IGKV3-7A0A075B6H7 116 aa6.06□□□□□ -1.44
PALB2-202ENST00000561514 TRAV10A0A0B4J240 114 aa6.06□□□□□ -1.44
PALB2-202ENST00000561514 A0A1B0GV50 99 aa6.06□□□□□ -1.44
PALB2-202ENST00000561514 A0A1W2PS18 150 aa6.06□□□□□ -1.44
PALB2-202ENST00000561514 FAM231BA6NCW3 169 aa6.06□□□□□ -1.44
PALB2-202ENST00000561514 GAGE12JA6NER3 117 aa6.06□□□□□ -1.44
PALB2-202ENST00000561514 DEFB4AO15263 64 aa6.06□□□□□ -1.44
PALB2-202ENST00000561514 NUPR1O60356 82 aa6.06□□□□□ -1.44
PALB2-202ENST00000561514 GAGE7O76087 117 aa6.06□□□□□ -1.44
PALB2-202ENST00000561514 IGHV3-48P01763 117 aa6.06□□□□□ -1.44
PALB2-202ENST00000561514 GAGE12FP0CL80 117 aa6.06□□□□□ -1.44
PALB2-202ENST00000561514 GAGE12GP0CL81 117 aa6.06□□□□□ -1.44
PALB2-202ENST00000561514 GAGE12IP0CL82 117 aa6.06□□□□□ -1.44
PALB2-202ENST00000561514 HIST1H1EP10412 219 aaKnown RBP6.06□□□□□ -1.44
PALB2-202ENST00000561514 HLA-DMBP28068 263 aa6.06□□□□□ -1.44
PALB2-202ENST00000561514 NKX2-1P43699 371 aaPredicted RBP6.06□□□□□ -1.44
PALB2-202ENST00000561514 GAGE4Q13068 117 aa6.06□□□□□ -1.44
PALB2-202ENST00000561514 Q6ZTC4 211 aa6.06□□□□□ -1.44
PALB2-202ENST00000561514 BPIFA4PQ86YQ2 179 aa6.06□□□□□ -1.44
PALB2-202ENST00000561514 STHQ8IWL8 128 aa6.06□□□□□ -1.44
PALB2-202ENST00000561514 TMEM252Q8N6L7 170 aa6.06□□□□□ -1.44
PALB2-202ENST00000561514 OR5C1Q8NGR4 320 aa6.06□□□□□ -1.44
PALB2-202ENST00000561514 TMEM70Q9BUB7 260 aa6.06□□□□□ -1.44
PALB2-202ENST00000561514 MRPL36Q9P0J6 103 aaKnown RBP6.06□□□□□ -1.44
PALB2-202ENST00000561514 RCL1Q9Y2P8 373 aaKnown RBP6.06□□□□□ -1.44
PALB2-202ENST00000561514 IGHV4-4A0A075B6R2 117 aa6.05□□□□□ -1.44
PALB2-202ENST00000561514 CTXND1A0A1B0GTU2 59 aa6.05□□□□□ -1.44
PALB2-202ENST00000561514 TEX48A0A1B0GUV7 120 aa6.05□□□□□ -1.44
PALB2-202ENST00000561514 IGLL5B9A064 214 aa6.05□□□□□ -1.44
PALB2-202ENST00000561514 TMEM262E9PQX1 116 aa6.05□□□□□ -1.44
PALB2-202ENST00000561514 F8WDY8 70 aa6.05□□□□□ -1.44
PALB2-202ENST00000561514 ISLRO14498 428 aa6.05□□□□□ -1.44
PALB2-202ENST00000561514 SLC25A6P12236 298 aa6.05□□□□□ -1.44
PALB2-202ENST00000561514 NPPCP23582 126 aa6.05□□□□□ -1.44
PALB2-202ENST00000561514 HBG1P69891 147 aa6.05□□□□□ -1.44
PALB2-202ENST00000561514 HBG2P69892 147 aa6.05□□□□□ -1.44
PALB2-202ENST00000561514 IZUMO4Q1ZYL8 232 aa6.05□□□□□ -1.44
PALB2-202ENST00000561514 Q6ZVH6 145 aa6.05□□□□□ -1.44
PALB2-202ENST00000561514 SMIM20Q8N5G0 67 aa6.05□□□□□ -1.44
PALB2-202ENST00000561514 METTL26Q96S19 204 aa6.05□□□□□ -1.44
PALB2-202ENST00000561514 RAB40CQ96S21 281 aa6.05□□□□□ -1.44
PALB2-202ENST00000561514 KCNIP2Q9NS61 270 aa6.05□□□□□ -1.44
PALB2-202ENST00000561514 IGHV3-66A0A0C4DH42 116 aa6.04□□□□□ -1.44
PALB2-202ENST00000561514 M0R2Z0 102 aa6.04□□□□□ -1.44
PALB2-202ENST00000561514 HSBP1O75506 76 aa6.04□□□□□ -1.44
PALB2-202ENST00000561514 SCGB2A1O75556 95 aa6.04□□□□□ -1.44
PALB2-202ENST00000561514 SPINK8P0C7L1 97 aa6.04□□□□□ -1.44
PALB2-202ENST00000561514 EVI2AP22794 236 aa6.04□□□□□ -1.44
PALB2-202ENST00000561514 SUB1P53999 127 aaKnown RBP eCLIP6.04□□□□□ -1.44
PALB2-202ENST00000561514 ZNF90Q03938 601 aa6.04□□□□□ -1.44
PALB2-202ENST00000561514 C12orf74Q32Q52 190 aa6.04□□□□□ -1.44
PALB2-202ENST00000561514 Q6Q795 121 aa6.04□□□□□ -1.44
PALB2-202ENST00000561514 SCRT2Q9NQ03 307 aa6.04□□□□□ -1.44
PALB2-202ENST00000561514 SLC39A9Q9NUM3 307 aa6.04□□□□□ -1.44
PALB2-202ENST00000561514 CELA1Q9UNI1 258 aa6.04□□□□□ -1.44
PALB2-202ENST00000561514 A0A0G2JRQ6 117 aa6.03□□□□□ -1.44
PALB2-202ENST00000561514 GRIFINA4D1Z8 144 aa6.03□□□□□ -1.44
PALB2-202ENST00000561514 KNCNA6PVL3 124 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms