RNA–Protein interactions for RNA: ENST00000561326.5

USP3-219, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-219ENST00000561326 ZNF415Q09FC8 603 aa7.52□□□□□ -1.21
USP3-219ENST00000561326 ZFP82Q8N141 532 aa7.52□□□□□ -1.21
USP3-219ENST00000561326 SCRT2Q9NQ03 307 aa7.52□□□□□ -1.21
USP3-219ENST00000561326 TMA7Q9Y2S6 64 aaKnown RBP7.52□□□□□ -1.21
USP3-219ENST00000561326 MUC21A0A0G2JKD1 596 aa7.51□□□□□ -1.21
USP3-219ENST00000561326 MUC21A0A140T8X8 626 aa7.51□□□□□ -1.21
USP3-219ENST00000561326 FRMD6-AS1P0C7T7 363 aa7.51□□□□□ -1.21
USP3-219ENST00000561326 RBMY1A1P0DJD3 496 aaKnown RBP7.51□□□□□ -1.21
USP3-219ENST00000561326 RBMY1CP0DJD4 496 aa7.51□□□□□ -1.21
USP3-219ENST00000561326 RNASE3P12724 160 aaKnown RBP7.51□□□□□ -1.21
USP3-219ENST00000561326 RBMY1FQ15415 496 aaKnown RBP7.51□□□□□ -1.21
USP3-219ENST00000561326 ZNF493Q6ZR52 646 aa7.51□□□□□ -1.21
USP3-219ENST00000561326 C1orf158Q8N1D5 194 aa7.51□□□□□ -1.21
USP3-219ENST00000561326 OR10AG1Q8NH19 301 aa7.51□□□□□ -1.21
USP3-219ENST00000561326 SPXQ9BT56 116 aa7.51□□□□□ -1.21
USP3-219ENST00000561326 TMEM191AQ9H0A3 160 aa7.51□□□□□ -1.21
USP3-219ENST00000561326 MDFICQ9P1T7 246 aa7.51□□□□□ -1.21
USP3-219ENST00000561326 TP53TG3Q9ULZ0 132 aa7.51□□□□□ -1.21
USP3-219ENST00000561326 TRRAPQ9Y4A5 3859 aa7.51□□□□□ -1.21
USP3-219ENST00000561326 G3V4G9 280 aa7.5□□□□□ -1.21
USP3-219ENST00000561326 M0R381 172 aa7.5□□□□□ -1.21
USP3-219ENST00000561326 GIG44P09565 113 aaPredicted RBP7.5□□□□□ -1.21
USP3-219ENST00000561326 SMIM17P0DL12 118 aa7.5□□□□□ -1.21
USP3-219ENST00000561326 IGHV4-30-4P0DP06 118 aa7.5□□□□□ -1.21
USP3-219ENST00000561326 KRTAP10-11P60412 298 aa7.5□□□□□ -1.21
USP3-219ENST00000561326 SAMD5Q5TGI4 173 aa7.5□□□□□ -1.21
USP3-219ENST00000561326 GATD1Q8NB37 220 aa7.5□□□□□ -1.21
USP3-219ENST00000561326 CSNK1G2-AS1Q8NCQ2 148 aa7.5□□□□□ -1.21
USP3-219ENST00000561326 C9orf85Q96MD7 179 aa7.5□□□□□ -1.21
USP3-219ENST00000561326 MSRB1Q9NZV6 116 aa7.5□□□□□ -1.21
USP3-219ENST00000561326 SMIM9A6NGZ8 99 aa7.49□□□□□ -1.21
USP3-219ENST00000561326 A8MZ25 164 aa7.49□□□□□ -1.21
USP3-219ENST00000561326 M0R2P5 195 aa7.49□□□□□ -1.21
USP3-219ENST00000561326 S100A6P06703 90 aa7.49□□□□□ -1.21
USP3-219ENST00000561326 RRN3P1Q2M238 152 aa7.49□□□□□ -1.21
USP3-219ENST00000561326 PIK3CD-AS1Q5SR53 167 aa7.49□□□□□ -1.21
USP3-219ENST00000561326 ZNF705AQ6ZN79 300 aaPredicted RBP7.49□□□□□ -1.21
USP3-219ENST00000561326 TMEM263Q8WUH6 116 aaKnown RBP7.49□□□□□ -1.21
USP3-219ENST00000561326 PTH2Q96A98 100 aa7.49□□□□□ -1.21
USP3-219ENST00000561326 C16orf74Q96GX8 76 aa7.49□□□□□ -1.21
USP3-219ENST00000561326 RCHY1Q96PM5 261 aa7.49□□□□□ -1.21
USP3-219ENST00000561326 NXPH4O95158 308 aa7.48□□□□□ -1.21
USP3-219ENST00000561326 SLAQ13239 276 aa7.48□□□□□ -1.21
USP3-219ENST00000561326 ZNF876PQ49A33 203 aa7.48□□□□□ -1.21
USP3-219ENST00000561326 DMRTA1Q5VZB9 504 aa7.48□□□□□ -1.21
USP3-219ENST00000561326 FAM104BQ5XKR9 115 aa7.48□□□□□ -1.21
USP3-219ENST00000561326 Q6ZWC4 215 aa7.48□□□□□ -1.21
USP3-219ENST00000561326 AP1S3Q96PC3 154 aa7.48□□□□□ -1.21
USP3-219ENST00000561326 GSN-AS1Q9NRJ2 163 aa7.48□□□□□ -1.21
USP3-219ENST00000561326 CMYA5Q8N3K9 4069 aa7.47□□□□□ -1.21
USP3-219ENST00000561326 PHOX2AO14813 284 aa7.47□□□□□ -1.21
USP3-219ENST00000561326 PPBPP02775 128 aa7.47□□□□□ -1.21
USP3-219ENST00000561326 AZU1P20160 251 aa7.47□□□□□ -1.21
USP3-219ENST00000561326 KRTAP21-3Q3LHN1 58 aa7.47□□□□□ -1.21
USP3-219ENST00000561326 KIAA1644Q3SXP7 199 aa7.47□□□□□ -1.21
USP3-219ENST00000561326 NDUFAF3Q9BU61 184 aa7.47□□□□□ -1.21
USP3-219ENST00000561326 DPH3P1Q9H4G8 78 aa7.47□□□□□ -1.21
USP3-219ENST00000561326 HIST1H2BKO60814 126 aa7.46□□□□□ -1.22
USP3-219ENST00000561326 PRM2P04554 102 aa7.46□□□□□ -1.22
USP3-219ENST00000561326 HIST1H2BJP06899 126 aa7.46□□□□□ -1.22
USP3-219ENST00000561326 RAB4AP20338 218 aa7.46□□□□□ -1.22
USP3-219ENST00000561326 EVI2AP22794 236 aa7.46□□□□□ -1.22
USP3-219ENST00000561326 HIST1H2BOP23527 126 aa7.46□□□□□ -1.22
USP3-219ENST00000561326 CKS2P33552 79 aa7.46□□□□□ -1.22
USP3-219ENST00000561326 HIST1H2BBP33778 126 aa7.46□□□□□ -1.22
USP3-219ENST00000561326 NDUFA6P56556 154 aa7.46□□□□□ -1.22
USP3-219ENST00000561326 HIST1H2BDP58876 126 aa7.46□□□□□ -1.22
USP3-219ENST00000561326 HIST1H2BCP62807 126 aa7.46□□□□□ -1.22
USP3-219ENST00000561326 HIST2H2BEQ16778 126 aa7.46□□□□□ -1.22
USP3-219ENST00000561326 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.46□□□□□ -1.22
USP3-219ENST00000561326 AMN1Q8IY45 258 aa7.46□□□□□ -1.22
USP3-219ENST00000561326 C11orf72Q8NBR9 251 aa7.46□□□□□ -1.22
USP3-219ENST00000561326 RNASE8Q8TDE3 154 aaKnown RBP7.46□□□□□ -1.22
USP3-219ENST00000561326 HIST1H2BHQ93079 126 aa7.46□□□□□ -1.22
USP3-219ENST00000561326 HIST1H2BNQ99877 126 aa7.46□□□□□ -1.22
USP3-219ENST00000561326 HIST1H2BMQ99879 126 aa7.46□□□□□ -1.22
USP3-219ENST00000561326 NACAE9PAV3 2078 aa7.46□□□□□ -1.22
USP3-219ENST00000561326 NBEAL2Q6ZNJ1 2754 aa7.46□□□□□ -1.22
USP3-219ENST00000561326 A8MWV9 139 aa7.45□□□□□ -1.22
USP3-219ENST00000561326 SPRY2O43597 315 aa7.45□□□□□ -1.22
USP3-219ENST00000561326 SRIP30626 198 aa7.45□□□□□ -1.22
USP3-219ENST00000561326 DAZ2Q13117 558 aaKnown RBP7.45□□□□□ -1.22
USP3-219ENST00000561326 LGALS9BQ3B8N2 356 aa7.45□□□□□ -1.22
USP3-219ENST00000561326 MRPL51Q4U2R6 128 aaKnown RBP7.45□□□□□ -1.22
USP3-219ENST00000561326 ORMDL3Q8N138 153 aa7.45□□□□□ -1.22
USP3-219ENST00000561326 C14orf178Q8N769 122 aaPredicted RBP7.45□□□□□ -1.22
USP3-219ENST00000561326 MRAP2Q96G30 205 aa7.45□□□□□ -1.22
USP3-219ENST00000561326 ALKBH7Q9BT30 221 aaPredicted RBP7.45□□□□□ -1.22
USP3-219ENST00000561326 NOTCH1P46531 2555 aa7.44□□□□□ -1.22
USP3-219ENST00000561326 F5H697 171 aa7.44□□□□□ -1.22
USP3-219ENST00000561326 PPP1R17O96001 155 aa7.44□□□□□ -1.22
USP3-219ENST00000561326 Q0VG73 95 aa7.44□□□□□ -1.22
USP3-219ENST00000561326 DEFB135Q30KP9 77 aa7.44□□□□□ -1.22
USP3-219ENST00000561326 OR10J3Q5JRS4 329 aa7.44□□□□□ -1.22
USP3-219ENST00000561326 KPRPQ5T749 579 aaPredicted RBP7.44□□□□□ -1.22
USP3-219ENST00000561326 BAGE3Q86Y29 109 aa7.44□□□□□ -1.22
USP3-219ENST00000561326 OR11H2Q8NH07 326 aa7.44□□□□□ -1.22
USP3-219ENST00000561326 RASL10AQ92737 203 aa7.44□□□□□ -1.22
USP3-219ENST00000561326 RNF183Q96D59 192 aa7.44□□□□□ -1.22
USP3-219ENST00000561326 PRELID3AQ96N28 172 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 93.6 ms