RNA–Protein interactions for RNA: ENST00000561242.1

TPM1-229, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-229ENST00000561242 RASL10AQ92737 203 aa7.63□□□□□ -1.19
TPM1-229ENST00000561242 IL36BQ9NZH7 164 aa7.63□□□□□ -1.19
TPM1-229ENST00000561242 NAT8Q9UHE5 227 aa7.63□□□□□ -1.19
TPM1-229ENST00000561242 PRO0255Q9UI72 69 aa7.63□□□□□ -1.19
TPM1-229ENST00000561242 HHLA3Q9XRX5 114 aa7.63□□□□□ -1.19
TPM1-229ENST00000561242 F5H697 171 aa7.62□□□□□ -1.19
TPM1-229ENST00000561242 RHODO00212 210 aa7.62□□□□□ -1.19
TPM1-229ENST00000561242 SRP19P09132 144 aaKnown RBP7.62□□□□□ -1.19
TPM1-229ENST00000561242 RPL19P84098 196 aaKnown RBP7.62□□□□□ -1.19
TPM1-229ENST00000561242 SH2D6Q7Z4S9 175 aa7.62□□□□□ -1.19
TPM1-229ENST00000561242 FER1L6-AS1Q8NA97 138 aa7.62□□□□□ -1.19
TPM1-229ENST00000561242 OCC1Q8TAD7 63 aa7.62□□□□□ -1.19
TPM1-229ENST00000561242 RPP21Q9H633 154 aaKnown RBP7.62□□□□□ -1.19
TPM1-229ENST00000561242 TRAV26-1A0A087WT03 109 aa7.61□□□□□ -1.19
TPM1-229ENST00000561242 IGKV3D-20A0A0C4DH25 116 aa7.61□□□□□ -1.19
TPM1-229ENST00000561242 A0A0J9YY99 117 aa7.61□□□□□ -1.19
TPM1-229ENST00000561242 CXCL1P09341 107 aa7.61□□□□□ -1.19
TPM1-229ENST00000561242 TRGC1P0CF51 173 aa7.61□□□□□ -1.19
TPM1-229ENST00000561242 MED14OSP0DP75 135 aa7.61□□□□□ -1.19
TPM1-229ENST00000561242 MRPL23Q16540 153 aaKnown RBP7.61□□□□□ -1.19
TPM1-229ENST00000561242 PIK3CD-AS1Q5SR53 167 aa7.61□□□□□ -1.19
TPM1-229ENST00000561242 FAM74A4Q5TZK3 123 aa7.61□□□□□ -1.19
TPM1-229ENST00000561242 TMEM88Q6PEY1 159 aa7.61□□□□□ -1.19
TPM1-229ENST00000561242 UQCC3Q6UW78 93 aa7.61□□□□□ -1.19
TPM1-229ENST00000561242 Q6ZQT7 251 aa7.61□□□□□ -1.19
TPM1-229ENST00000561242 MLST8Q9BVC4 326 aa7.61□□□□□ -1.19
TPM1-229ENST00000561242 ICOSQ9Y6W8 199 aa7.61□□□□□ -1.19
TPM1-229ENST00000561242 SRIP30626 198 aa7.6□□□□□ -1.19
TPM1-229ENST00000561242 CRIP1P50238 77 aa7.6□□□□□ -1.19
TPM1-229ENST00000561242 NDUFA5Q16718 116 aa7.6□□□□□ -1.19
TPM1-229ENST00000561242 NUDT10Q8NFP7 164 aa7.6□□□□□ -1.19
TPM1-229ENST00000561242 PTH2Q96A98 100 aa7.6□□□□□ -1.19
TPM1-229ENST00000561242 NUDT11Q96G61 164 aa7.6□□□□□ -1.19
TPM1-229ENST00000561242 C18orf15Q96N68 181 aa7.6□□□□□ -1.19
TPM1-229ENST00000561242 MEGF8Q7Z7M0 2845 aa7.6□□□□□ -1.19
TPM1-229ENST00000561242 IGHV3-73A0A0B4J1V6 119 aa7.59□□□□□ -1.19
TPM1-229ENST00000561242 PLAC8L1A1L4L8 177 aa7.59□□□□□ -1.19
TPM1-229ENST00000561242 PGPEP1LA6NFU8 196 aa7.59□□□□□ -1.19
TPM1-229ENST00000561242 PPP1R2P9O14990 202 aa7.59□□□□□ -1.19
TPM1-229ENST00000561242 TWIST1Q15672 202 aa7.59□□□□□ -1.19
TPM1-229ENST00000561242 DNLZQ5SXM8 178 aa7.59□□□□□ -1.19
TPM1-229ENST00000561242 KCNIP4Q6PIL6 250 aa7.59□□□□□ -1.19
TPM1-229ENST00000561242 OR10G8Q8NGN5 311 aa7.59□□□□□ -1.19
TPM1-229ENST00000561242 C9orf85Q96MD7 179 aa7.59□□□□□ -1.19
TPM1-229ENST00000561242 AP1S3Q96PC3 154 aa7.59□□□□□ -1.19
TPM1-229ENST00000561242 RNASE7Q9H1E1 156 aaKnown RBP7.59□□□□□ -1.19
TPM1-229ENST00000561242 AGRNO00468 2067 aa7.58□□□□□ -1.2
TPM1-229ENST00000561242 F8W036 122 aa7.58□□□□□ -1.2
TPM1-229ENST00000561242 H3BNG1 76 aa7.58□□□□□ -1.2
TPM1-229ENST00000561242 H7C1H1 209 aa7.58□□□□□ -1.2
TPM1-229ENST00000561242 MT-ND4LP03901 98 aa7.58□□□□□ -1.2
TPM1-229ENST00000561242 SFTA3P0C7M3 94 aa7.58□□□□□ -1.2
TPM1-229ENST00000561242 RNASE3P12724 160 aaKnown RBP7.58□□□□□ -1.2
TPM1-229ENST00000561242 PNRC1Q12796 327 aaPredicted RBP7.58□□□□□ -1.2
TPM1-229ENST00000561242 RHOHQ15669 191 aa7.58□□□□□ -1.2
TPM1-229ENST00000561242 ZNF56Q15929 161 aa7.58□□□□□ -1.2
TPM1-229ENST00000561242 FAM231DQ6ZW35 169 aa7.58□□□□□ -1.2
TPM1-229ENST00000561242 C11orf21Q9P2W6 132 aa7.58□□□□□ -1.2
TPM1-229ENST00000561242 CMYA5Q8N3K9 4069 aa7.57□□□□□ -1.2
TPM1-229ENST00000561242 RS1O15537 224 aa7.57□□□□□ -1.2
TPM1-229ENST00000561242 S100A8P05109 93 aa7.57□□□□□ -1.2
TPM1-229ENST00000561242 MGPP08493 103 aa7.57□□□□□ -1.2
TPM1-229ENST00000561242 OR5AL1P0C617 328 aa7.57□□□□□ -1.2
TPM1-229ENST00000561242 GYPEP15421 78 aa7.57□□□□□ -1.2
TPM1-229ENST00000561242 RIGQ13278 110 aa7.57□□□□□ -1.2
TPM1-229ENST00000561242 DMRTA1Q5VZB9 504 aa7.57□□□□□ -1.2
TPM1-229ENST00000561242 LGALS9CQ6DKI2 356 aa7.57□□□□□ -1.2
TPM1-229ENST00000561242 ZFP2Q6ZN57 461 aa7.57□□□□□ -1.2
TPM1-229ENST00000561242 NEGR1Q7Z3B1 354 aa7.57□□□□□ -1.2
TPM1-229ENST00000561242 LINC01551Q86U37 167 aa7.57□□□□□ -1.2
TPM1-229ENST00000561242 COMMD7Q86VX2 200 aa7.57□□□□□ -1.2
TPM1-229ENST00000561242 LINC00612Q8N6U2 182 aa7.57□□□□□ -1.2
TPM1-229ENST00000561242 SFRP2Q96HF1 295 aa7.57□□□□□ -1.2
TPM1-229ENST00000561242 ZNF479Q96JC4 524 aa7.57□□□□□ -1.2
TPM1-229ENST00000561242 OSTCQ9NRP0 149 aa7.57□□□□□ -1.2
TPM1-229ENST00000561242 MUC21A0A0G2JKD1 596 aa7.56□□□□□ -1.2
TPM1-229ENST00000561242 MUC21A0A140T8X8 626 aa7.56□□□□□ -1.2
TPM1-229ENST00000561242 C19orf71A6NCJ1 209 aa7.56□□□□□ -1.2
TPM1-229ENST00000561242 FAM3BP58499 235 aaPredicted RBP7.56□□□□□ -1.2
TPM1-229ENST00000561242 RPL36AP83881 106 aaKnown RBP7.56□□□□□ -1.2
TPM1-229ENST00000561242 CT83Q5H943 113 aa7.56□□□□□ -1.2
TPM1-229ENST00000561242 CFAP126Q5VTH2 177 aa7.56□□□□□ -1.2
TPM1-229ENST00000561242 WDR73Q6P4I2 378 aa7.56□□□□□ -1.2
TPM1-229ENST00000561242 LYZL1Q6UWQ5 148 aa7.56□□□□□ -1.2
TPM1-229ENST00000561242 RPL36ALQ969Q0 106 aaKnown RBP7.56□□□□□ -1.2
TPM1-229ENST00000561242 APLNQ9ULZ1 77 aa7.56□□□□□ -1.2
TPM1-229ENST00000561242 TRAV9-2A0A087WT02 112 aa7.55□□□□□ -1.2
TPM1-229ENST00000561242 A0A087WWL8 130 aa7.55□□□□□ -1.2
TPM1-229ENST00000561242 TRAV8-6A0A0B4J262 113 aa7.55□□□□□ -1.2
TPM1-229ENST00000561242 TRBV6-4A0A1B0GX49 114 aa7.55□□□□□ -1.2
TPM1-229ENST00000561242 IGLV2-8P01709 118 aa7.55□□□□□ -1.2
TPM1-229ENST00000561242 GZMBP10144 247 aa7.55□□□□□ -1.2
TPM1-229ENST00000561242 CRYBA4P53673 196 aa7.55□□□□□ -1.2
TPM1-229ENST00000561242 FHL2Q14192 279 aa7.55□□□□□ -1.2
TPM1-229ENST00000561242 RNF212Q495C1 297 aa7.55□□□□□ -1.2
TPM1-229ENST00000561242 TSKUQ8WUA8 353 aa7.55□□□□□ -1.2
TPM1-229ENST00000561242 PGLYRP4Q96LB8 373 aa7.55□□□□□ -1.2
TPM1-229ENST00000561242 GFRA4Q9GZZ7 299 aa7.55□□□□□ -1.2
TPM1-229ENST00000561242 NAT8BQ9UHF3 227 aa7.55□□□□□ -1.2
TPM1-229ENST00000561242 TNFRSF18Q9Y5U5 241 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms