RNA–Protein interactions for RNA: ENST00000560658.5

TRPM1-211, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

TSL 2

Gene TRPM1, Length 1,649 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-211ENST00000560658 TCTAP57738 103 aa13.35□□□□□ -0.27
TRPM1-211ENST00000560658 RPL11P62913 178 aaKnown RBP13.35□□□□□ -0.27
TRPM1-211ENST00000560658 COTL1Q14019 142 aa13.35□□□□□ -0.27
TRPM1-211ENST00000560658 TM4SF20Q53R12 229 aa13.35□□□□□ -0.27
TRPM1-211ENST00000560658 PHLDA1Q8WV24 401 aaPredicted RBP13.35□□□□□ -0.27
TRPM1-211ENST00000560658 KALRNO60229 2985 aa13.35□□□□□ -0.27
TRPM1-211ENST00000560658 IGHV3OR16-10A0A075B7F0 116 aa13.35□□□□□ -0.27
TRPM1-211ENST00000560658 MYMXA0A1B0GTQ4 84 aa13.35□□□□□ -0.27
TRPM1-211ENST00000560658 PRB1P04280 392 aa13.35□□□□□ -0.27
TRPM1-211ENST00000560658 GNLYP22749 145 aa13.35□□□□□ -0.27
TRPM1-211ENST00000560658 FAM159AQ6UWV7 190 aa13.35□□□□□ -0.27
TRPM1-211ENST00000560658 C2orf66Q6UXQ4 117 aa13.35□□□□□ -0.27
TRPM1-211ENST00000560658 C14orf178Q8N769 122 aaPredicted RBP13.35□□□□□ -0.27
TRPM1-211ENST00000560658 E9PLD3 99 aa13.34□□□□□ -0.27
TRPM1-211ENST00000560658 RNASE3P12724 160 aaKnown RBP13.34□□□□□ -0.27
TRPM1-211ENST00000560658 TMEM141Q96I45 108 aa13.34□□□□□ -0.27
TRPM1-211ENST00000560658 SMG1Q96Q15 3661 aaKnown RBP13.34□□□□□ -0.27
TRPM1-211ENST00000560658 LAMA5O15230 3695 aa13.33□□□□□ -0.28
TRPM1-211ENST00000560658 MGPP08493 103 aa13.33□□□□□ -0.28
TRPM1-211ENST00000560658 IGHV4-38-2P0DP08 117 aa13.33□□□□□ -0.28
TRPM1-211ENST00000560658 LY6EQ16553 131 aa13.33□□□□□ -0.28
TRPM1-211ENST00000560658 CYSLTR1Q9Y271 337 aa13.33□□□□□ -0.28
TRPM1-211ENST00000560658 A0A1B0GWB2 263 aa13.32□□□□□ -0.28
TRPM1-211ENST00000560658 B4DSR2 109 aa13.32□□□□□ -0.28
TRPM1-211ENST00000560658 G3V4G9 280 aa13.32□□□□□ -0.28
TRPM1-211ENST00000560658 J3QKU1 62 aa13.32□□□□□ -0.28
TRPM1-211ENST00000560658 Q6ZQT7 251 aa13.32□□□□□ -0.28
TRPM1-211ENST00000560658 BAALCQ8WXS3 180 aa13.32□□□□□ -0.28
TRPM1-211ENST00000560658 HIST1H4GQ99525 98 aa13.32□□□□□ -0.28
TRPM1-211ENST00000560658 KIF25-AS1Q9Y6Z4 181 aa13.32□□□□□ -0.28
TRPM1-211ENST00000560658 VCYO14598 125 aa13.31□□□□□ -0.28
TRPM1-211ENST00000560658 IGHV3-11P01762 117 aa13.31□□□□□ -0.28
TRPM1-211ENST00000560658 HERVK_113P61574 105 aa13.31□□□□□ -0.28
TRPM1-211ENST00000560658 ZNF843Q8N446 348 aa13.31□□□□□ -0.28
TRPM1-211ENST00000560658 KLK15Q9H2R5 256 aa13.31□□□□□ -0.28
TRPM1-211ENST00000560658 NHP2Q9NX24 153 aaKnown RBP13.31□□□□□ -0.28
TRPM1-211ENST00000560658 TRBV7-3A0A075B6L6 115 aa13.31□□□□□ -0.28
TRPM1-211ENST00000560658 TRBV6-5A0A0K0K1A5 114 aa13.31□□□□□ -0.28
TRPM1-211ENST00000560658 TMEM238LA0A1B0GVL6 79 aa13.31□□□□□ -0.28
TRPM1-211ENST00000560658 A6NJY4 79 aa13.31□□□□□ -0.28
TRPM1-211ENST00000560658 RNF223E7ERA6 249 aa13.31□□□□□ -0.28
TRPM1-211ENST00000560658 ATP5J2P56134 94 aa13.31□□□□□ -0.28
TRPM1-211ENST00000560658 MAPKAPK5-AS1Q8N8E1 139 aa13.31□□□□□ -0.28
TRPM1-211ENST00000560658 SYT8Q8NBV8 401 aa13.31□□□□□ -0.28
TRPM1-211ENST00000560658 CSTL1Q9H114 145 aa13.31□□□□□ -0.28
TRPM1-211ENST00000560658 F8W1H4 67 aa13.3□□□□□ -0.28
TRPM1-211ENST00000560658 J3KRW8 73 aa13.3□□□□□ -0.28
TRPM1-211ENST00000560658 C12orf74Q32Q52 190 aa13.3□□□□□ -0.28
TRPM1-211ENST00000560658 RPL39LQ96EH5 51 aaKnown RBP13.3□□□□□ -0.28
TRPM1-211ENST00000560658 TIMM17AQ99595 171 aa13.3□□□□□ -0.28
TRPM1-211ENST00000560658 KIR2DL4Q99706 377 aa13.3□□□□□ -0.28
TRPM1-211ENST00000560658 MAST4O15021 2626 aa13.3□□□□□ -0.28
TRPM1-211ENST00000560658 IGLL5B9A064 214 aa13.29□□□□□ -0.28
TRPM1-211ENST00000560658 GNRH2O43555 120 aa13.29□□□□□ -0.28
TRPM1-211ENST00000560658 DCANP1Q8TF63 244 aa13.29□□□□□ -0.28
TRPM1-211ENST00000560658 TTTY13Q9BZ97 58 aa13.29□□□□□ -0.28
TRPM1-211ENST00000560658 PRSS29PA6NIE9 313 aa13.28□□□□□ -0.28
TRPM1-211ENST00000560658 LGALS9O00182 355 aa13.28□□□□□ -0.28
TRPM1-211ENST00000560658 POLR2KP53803 58 aaKnown RBP13.28□□□□□ -0.28
TRPM1-211ENST00000560658 LINC00315P59091 139 aa13.28□□□□□ -0.28
TRPM1-211ENST00000560658 BLCAPP62952 87 aa13.28□□□□□ -0.28
TRPM1-211ENST00000560658 FOXI2Q6ZQN5 318 aa13.28□□□□□ -0.28
TRPM1-211ENST00000560658 ZNF479Q96JC4 524 aa13.28□□□□□ -0.28
TRPM1-211ENST00000560658 SPTA1P02549 2419 aa13.28□□□□□ -0.28
TRPM1-211ENST00000560658 J3QLI3 93 aa13.28□□□□□ -0.28
TRPM1-211ENST00000560658 DUSP14O95147 198 aaKnown RBP13.28□□□□□ -0.28
TRPM1-211ENST00000560658 RIPPLY3P57055 190 aa13.28□□□□□ -0.28
TRPM1-211ENST00000560658 SNRPD3P62318 126 aaKnown RBP13.28□□□□□ -0.28
TRPM1-211ENST00000560658 RNF152Q8N8N0 203 aa13.28□□□□□ -0.28
TRPM1-211ENST00000560658 PSMB8P28062 276 aa13.27□□□□□ -0.29
TRPM1-211ENST00000560658 PMVKQ15126 192 aa13.27□□□□□ -0.29
TRPM1-211ENST00000560658 IGHV4-30-2A0A087WSY4 118 aa13.26□□□□□ -0.29
TRPM1-211ENST00000560658 F6UB75 175 aa13.26□□□□□ -0.29
TRPM1-211ENST00000560658 J3QR89 54 aa13.26□□□□□ -0.29
TRPM1-211ENST00000560658 SCGB2A2Q13296 93 aa13.26□□□□□ -0.29
TRPM1-211ENST00000560658 RRN3P1Q2M238 152 aa13.26□□□□□ -0.29
TRPM1-211ENST00000560658 C9orf85Q96MD7 179 aa13.26□□□□□ -0.29
TRPM1-211ENST00000560658 NAA38Q9BRA0 125 aaKnown RBP13.26□□□□□ -0.29
TRPM1-211ENST00000560658 TRBV27A0A0K0K1C4 114 aa13.25□□□□□ -0.29
TRPM1-211ENST00000560658 RHOHQ15669 191 aa13.25□□□□□ -0.29
TRPM1-211ENST00000560658 C21orf62-AS1Q17RA5 79 aa13.25□□□□□ -0.29
TRPM1-211ENST00000560658 ZFP2Q6ZN57 461 aa13.25□□□□□ -0.29
TRPM1-211ENST00000560658 PRADC1Q9BSG0 188 aa13.25□□□□□ -0.29
TRPM1-211ENST00000560658 IGIPA6NJ69 53 aa13.24□□□□□ -0.29
TRPM1-211ENST00000560658 LGALS1P09382 135 aaKnown RBP13.24□□□□□ -0.29
TRPM1-211ENST00000560658 SUMO4Q6EEV6 95 aa13.24□□□□□ -0.29
TRPM1-211ENST00000560658 HRNRQ86YZ3 2850 aaPredicted RBP13.24□□□□□ -0.29
TRPM1-211ENST00000560658 ZNF462Q96JM2 2506 aa13.24□□□□□ -0.29
TRPM1-211ENST00000560658 CD7P09564 240 aa13.24□□□□□ -0.29
TRPM1-211ENST00000560658 LYRM7Q5U5X0 104 aa13.24□□□□□ -0.29
TRPM1-211ENST00000560658 A0A0J9YX75 114 aa13.23□□□□□ -0.29
TRPM1-211ENST00000560658 C11orf86A6NJI1 115 aa13.23□□□□□ -0.29
TRPM1-211ENST00000560658 K7ERJ3 54 aa13.23□□□□□ -0.29
TRPM1-211ENST00000560658 HOXA3O43365 443 aaPredicted RBP13.23□□□□□ -0.29
TRPM1-211ENST00000560658 SAP30O75446 220 aa13.23□□□□□ -0.29
TRPM1-211ENST00000560658 TP53TG1Q9Y2A0 90 aa13.23□□□□□ -0.29
TRPM1-211ENST00000560658 WNK2Q9Y3S1 2297 aa13.23□□□□□ -0.29
TRPM1-211ENST00000560658 IGHV3-16A0A0C4DH30 117 aa13.22□□□□□ -0.29
TRPM1-211ENST00000560658 ZNF815PA8K554 130 aa13.22□□□□□ -0.29
TRPM1-211ENST00000560658 K7EQG2 157 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms