RNA–Protein interactions for RNA: ENST00000560628.1

LDLR-214, Transcript of low density lipoprotein receptor, humanhuman

TSL 3

Gene LDLR, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-214ENST00000560628 CTXND1A0A1B0GTU2 59 aa6.88□□□□□ -1.31
LDLR-214ENST00000560628 TRBV6-4A0A1B0GX49 114 aa6.88□□□□□ -1.31
LDLR-214ENST00000560628 FABP5P3A8MUU1 101 aa6.88□□□□□ -1.31
LDLR-214ENST00000560628 CIDEAO60543 219 aa6.88□□□□□ -1.31
LDLR-214ENST00000560628 IGHV3-30P01768 117 aa6.88□□□□□ -1.31
LDLR-214ENST00000560628 IGHV3-33P01772 117 aa6.88□□□□□ -1.31
LDLR-214ENST00000560628 IGHV3-30-3P0DP02 117 aa6.88□□□□□ -1.31
LDLR-214ENST00000560628 IGHV3-30-5P0DP03 117 aa6.88□□□□□ -1.31
LDLR-214ENST00000560628 S100A4P26447 101 aaKnown RBP6.88□□□□□ -1.31
LDLR-214ENST00000560628 TIRAPP58753 221 aa6.88□□□□□ -1.31
LDLR-214ENST00000560628 KRTAP10-1P60331 282 aa6.88□□□□□ -1.31
LDLR-214ENST00000560628 LGALSLQ3ZCW2 172 aaPredicted RBP6.88□□□□□ -1.31
LDLR-214ENST00000560628 OR10J3Q5JRS4 329 aa6.88□□□□□ -1.31
LDLR-214ENST00000560628 AKR1C8PQ5T2L2 129 aa6.88□□□□□ -1.31
LDLR-214ENST00000560628 C10orf126Q8N4M7 172 aa6.88□□□□□ -1.31
LDLR-214ENST00000560628 Q9HAA7 133 aa6.88□□□□□ -1.31
LDLR-214ENST00000560628 ARL2-SNX15V9GYD0 113 aa6.88□□□□□ -1.31
LDLR-214ENST00000560628 FAM74A7A6NL05 159 aa6.87□□□□□ -1.31
LDLR-214ENST00000560628 PEX7O00628 323 aa6.87□□□□□ -1.31
LDLR-214ENST00000560628 PSCAO43653 123 aa6.87□□□□□ -1.31
LDLR-214ENST00000560628 XGP55808 180 aa6.87□□□□□ -1.31
LDLR-214ENST00000560628 RHOHQ15669 191 aa6.87□□□□□ -1.31
LDLR-214ENST00000560628 LINC01556Q5JQF7 62 aa6.87□□□□□ -1.31
LDLR-214ENST00000560628 CDPF1Q6NVV7 123 aa6.87□□□□□ -1.31
LDLR-214ENST00000560628 ATP6V0E2Q8NHE4 81 aa6.87□□□□□ -1.31
LDLR-214ENST00000560628 PTH2Q96A98 100 aa6.87□□□□□ -1.31
LDLR-214ENST00000560628 JPT2Q9H910 190 aa6.87□□□□□ -1.31
LDLR-214ENST00000560628 Q9UF83 564 aa6.87□□□□□ -1.31
LDLR-214ENST00000560628 GRIFINA4D1Z8 144 aa6.86□□□□□ -1.31
LDLR-214ENST00000560628 GAGE12JA6NER3 117 aa6.86□□□□□ -1.31
LDLR-214ENST00000560628 IBA57-AS1B1ANH7 110 aa6.86□□□□□ -1.31
LDLR-214ENST00000560628 B4DEV8 164 aa6.86□□□□□ -1.31
LDLR-214ENST00000560628 G3V3Q6 166 aa6.86□□□□□ -1.31
LDLR-214ENST00000560628 SMLR1H3BR10 107 aa6.86□□□□□ -1.31
LDLR-214ENST00000560628 M0R036 132 aa6.86□□□□□ -1.31
LDLR-214ENST00000560628 MGST1P10620 155 aaKnown RBP6.86□□□□□ -1.31
LDLR-214ENST00000560628 ASIPP42127 132 aa6.86□□□□□ -1.31
LDLR-214ENST00000560628 CRIP1P50238 77 aa6.86□□□□□ -1.31
LDLR-214ENST00000560628 GAGE1Q13065 139 aa6.86□□□□□ -1.31
LDLR-214ENST00000560628 GAGE4Q13068 117 aa6.86□□□□□ -1.31
LDLR-214ENST00000560628 GAGE5Q13069 117 aa6.86□□□□□ -1.31
LDLR-214ENST00000560628 GAGE13Q4V321 117 aa6.86□□□□□ -1.31
LDLR-214ENST00000560628 LELP1Q5T871 98 aa6.86□□□□□ -1.31
LDLR-214ENST00000560628 DMRTA1Q5VZB9 504 aa6.86□□□□□ -1.31
LDLR-214ENST00000560628 SAMD10Q9BYL1 202 aa6.86□□□□□ -1.31
LDLR-214ENST00000560628 GTSF1LQ9H1H1 148 aa6.86□□□□□ -1.31
LDLR-214ENST00000560628 PARLQ9H300 379 aa6.86□□□□□ -1.31
LDLR-214ENST00000560628 CYTL1Q9NRR1 136 aa6.86□□□□□ -1.31
LDLR-214ENST00000560628 MAP1LC3B2A6NCE7 125 aa6.85□□□□□ -1.31
LDLR-214ENST00000560628 LRCOL1A6NCL2 159 aa6.85□□□□□ -1.31
LDLR-214ENST00000560628 A8MWV9 139 aa6.85□□□□□ -1.31
LDLR-214ENST00000560628 EPM2AB3EWF7 344 aa6.85□□□□□ -1.31
LDLR-214ENST00000560628 H3BVH4 76 aa6.85□□□□□ -1.31
LDLR-214ENST00000560628 ARPC5O15511 151 aa6.85□□□□□ -1.31
LDLR-214ENST00000560628 GCSHP23434 173 aa6.85□□□□□ -1.31
LDLR-214ENST00000560628 Q86TA4 180 aa6.85□□□□□ -1.31
LDLR-214ENST00000560628 Q8N3U1 123 aa6.85□□□□□ -1.31
LDLR-214ENST00000560628 HIST1H2BAQ96A08 127 aa6.85□□□□□ -1.31
LDLR-214ENST00000560628 ZC2HC1AQ96GY0 325 aa6.85□□□□□ -1.31
LDLR-214ENST00000560628 MAP1LC3BQ9GZQ8 125 aa6.85□□□□□ -1.31
LDLR-214ENST00000560628 APOBP04114 4563 aaKnown RBP6.85□□□□□ -1.31
LDLR-214ENST00000560628 KRBOX1C9JBD0 128 aa6.84□□□□□ -1.31
LDLR-214ENST00000560628 SH2D1AO60880 128 aa6.84□□□□□ -1.31
LDLR-214ENST00000560628 ARMS2P0C7Q2 107 aa6.84□□□□□ -1.31
LDLR-214ENST00000560628 FHITP49789 147 aa6.84□□□□□ -1.31
LDLR-214ENST00000560628 HAMPP81172 84 aa6.84□□□□□ -1.31
LDLR-214ENST00000560628 RGS21Q2M5E4 152 aa6.84□□□□□ -1.31
LDLR-214ENST00000560628 CST9LP1Q5W188 147 aa6.84□□□□□ -1.31
LDLR-214ENST00000560628 ZFP2Q6ZN57 461 aa6.84□□□□□ -1.31
LDLR-214ENST00000560628 C14orf178Q8N769 122 aaPredicted RBP6.84□□□□□ -1.31
LDLR-214ENST00000560628 NKX6-2Q9C056 277 aaPredicted RBP6.84□□□□□ -1.31
LDLR-214ENST00000560628 IL36BQ9NZH7 164 aa6.84□□□□□ -1.31
LDLR-214ENST00000560628 DNAH5Q8TE73 4624 aa6.84□□□□□ -1.31
LDLR-214ENST00000560628 TMSB15BA0A087X1C1 80 aa6.83□□□□□ -1.32
LDLR-214ENST00000560628 IGLV5-52A0A0A0MRZ9 124 aa6.83□□□□□ -1.32
LDLR-214ENST00000560628 SMR3BP02814 79 aaPredicted RBP6.83□□□□□ -1.32
LDLR-214ENST00000560628 FAM162BQ5T6X4 162 aa6.83□□□□□ -1.32
LDLR-214ENST00000560628 UFSP1Q6NVU6 142 aa6.83□□□□□ -1.32
LDLR-214ENST00000560628 STOML3Q8TAV4 291 aa6.83□□□□□ -1.32
LDLR-214ENST00000560628 ZFP30Q9Y2G7 519 aa6.83□□□□□ -1.32
LDLR-214ENST00000560628 A0A087WWL8 130 aa6.82□□□□□ -1.32
LDLR-214ENST00000560628 A0A1B0GV50 99 aa6.82□□□□□ -1.32
LDLR-214ENST00000560628 PAGE4O60829 102 aa6.82□□□□□ -1.32
LDLR-214ENST00000560628 UBE2G1P62253 170 aa6.82□□□□□ -1.32
LDLR-214ENST00000560628 PIK3CD-AS1Q5SR53 167 aa6.82□□□□□ -1.32
LDLR-214ENST00000560628 FAM74A4Q5TZK3 123 aa6.82□□□□□ -1.32
LDLR-214ENST00000560628 DAZ4Q86SG3 579 aaKnown RBP6.82□□□□□ -1.32
LDLR-214ENST00000560628 SYT8Q8NBV8 401 aa6.82□□□□□ -1.32
LDLR-214ENST00000560628 FMC1Q96HJ9 113 aa6.82□□□□□ -1.32
LDLR-214ENST00000560628 DAZ3Q9NR90 486 aaKnown RBP6.82□□□□□ -1.32
LDLR-214ENST00000560628 BOLA1Q9Y3E2 137 aa6.82□□□□□ -1.32
LDLR-214ENST00000560628 M0R381 172 aa6.81□□□□□ -1.32
LDLR-214ENST00000560628 INAFM2P0DMQ5 153 aa6.81□□□□□ -1.32
LDLR-214ENST00000560628 LINC00694P0DN24 101 aa6.81□□□□□ -1.32
LDLR-214ENST00000560628 ZNF674Q2M3X9 581 aa6.81□□□□□ -1.32
LDLR-214ENST00000560628 DNLZQ5SXM8 178 aa6.81□□□□□ -1.32
LDLR-214ENST00000560628 COX8CQ7Z4L0 72 aa6.81□□□□□ -1.32
LDLR-214ENST00000560628 Q8N814 137 aa6.81□□□□□ -1.32
LDLR-214ENST00000560628 OR11H4Q8NGC9 324 aa6.81□□□□□ -1.32
LDLR-214ENST00000560628 FAM213BQ8TBF2 198 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms