RNA–Protein interactions for RNA: ENST00000560519.1

HERC1-209, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 591 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-209ENST00000560519 ZNF138P52744 262 aa6.49□□□□□ -1.37
HERC1-209ENST00000560519 SUMO1P63165 101 aaKnown RBP6.49□□□□□ -1.37
HERC1-209ENST00000560519 FAM159AQ6UWV7 190 aa6.49□□□□□ -1.37
HERC1-209ENST00000560519 ZFAND2AQ8N6M9 145 aa6.49□□□□□ -1.37
HERC1-209ENST00000560519 Q8N814 137 aa6.49□□□□□ -1.37
HERC1-209ENST00000560519 TCEAL7Q9BRU2 100 aa6.49□□□□□ -1.37
HERC1-209ENST00000560519 MDFICQ9P1T7 246 aa6.49□□□□□ -1.37
HERC1-209ENST00000560519 TRAV4A0A0B4J268 109 aa6.48□□□□□ -1.37
HERC1-209ENST00000560519 FBLL1A6NHQ2 334 aaKnown RBP6.48□□□□□ -1.37
HERC1-209ENST00000560519 F6UZH7 168 aa6.48□□□□□ -1.37
HERC1-209ENST00000560519 IFNA7P01567 189 aa6.48□□□□□ -1.37
HERC1-209ENST00000560519 TIRAPP58753 221 aa6.48□□□□□ -1.37
HERC1-209ENST00000560519 UBE2G2P60604 165 aa6.48□□□□□ -1.37
HERC1-209ENST00000560519 LINC01556Q5JQF7 62 aa6.48□□□□□ -1.37
HERC1-209ENST00000560519 PRR9Q5T870 116 aa6.48□□□□□ -1.37
HERC1-209ENST00000560519 SYT8Q8NBV8 401 aa6.48□□□□□ -1.37
HERC1-209ENST00000560519 RASL10AQ92737 203 aa6.48□□□□□ -1.37
HERC1-209ENST00000560519 RPH3ALQ9UNE2 315 aa6.48□□□□□ -1.37
HERC1-209ENST00000560519 MYCBP2O75592 4640 aa6.48□□□□□ -1.37
HERC1-209ENST00000560519 DMBT1Q9UGM3 2413 aaPredicted RBP6.48□□□□□ -1.37
HERC1-209ENST00000560519 FAT1Q14517 4588 aa6.47□□□□□ -1.37
HERC1-209ENST00000560519 TRAV8-6A0A0B4J262 113 aa6.47□□□□□ -1.37
HERC1-209ENST00000560519 LRCOL1A6NCL2 159 aa6.47□□□□□ -1.37
HERC1-209ENST00000560519 FAM74A7A6NL05 159 aa6.47□□□□□ -1.37
HERC1-209ENST00000560519 GGTLC3B5MD39 225 aa6.47□□□□□ -1.37
HERC1-209ENST00000560519 IFNA1P01562 189 aa6.47□□□□□ -1.37
HERC1-209ENST00000560519 TCRAP04437 139 aa6.47□□□□□ -1.37
HERC1-209ENST00000560519 SFTA3P0C7M3 94 aa6.47□□□□□ -1.37
HERC1-209ENST00000560519 BLOC1S1P78537 153 aa6.47□□□□□ -1.37
HERC1-209ENST00000560519 HAMPP81172 84 aa6.47□□□□□ -1.37
HERC1-209ENST00000560519 LAGE3Q14657 143 aa6.47□□□□□ -1.37
HERC1-209ENST00000560519 CST9LP1Q5W188 147 aa6.47□□□□□ -1.37
HERC1-209ENST00000560519 ALKAL2Q6UX46 152 aa6.47□□□□□ -1.37
HERC1-209ENST00000560519 GOLT1AQ6ZVE7 132 aa6.47□□□□□ -1.37
HERC1-209ENST00000560519 CYB561D1Q8N8Q1 229 aa6.47□□□□□ -1.37
HERC1-209ENST00000560519 NHLRC2Q8NBF2 726 aa6.47□□□□□ -1.37
HERC1-209ENST00000560519 Q8TAT8 98 aa6.47□□□□□ -1.37
HERC1-209ENST00000560519 DEFB104AQ8WTQ1 72 aa6.47□□□□□ -1.37
HERC1-209ENST00000560519 HIST1H2BAQ96A08 127 aa6.47□□□□□ -1.37
HERC1-209ENST00000560519 ZNF479Q96JC4 524 aa6.47□□□□□ -1.37
HERC1-209ENST00000560519 NDFIP1Q9BT67 221 aa6.47□□□□□ -1.37
HERC1-209ENST00000560519 MANBALQ9NQG1 85 aa6.47□□□□□ -1.37
HERC1-209ENST00000560519 EPDR1Q9UM22 224 aa6.47□□□□□ -1.37
HERC1-209ENST00000560519 LENEPQ9Y5L5 61 aa6.47□□□□□ -1.37
HERC1-209ENST00000560519 A0A1B0GV50 99 aa6.46□□□□□ -1.38
HERC1-209ENST00000560519 IBA57-AS1B1ANH7 110 aa6.46□□□□□ -1.38
HERC1-209ENST00000560519 PAGE4O60829 102 aa6.46□□□□□ -1.38
HERC1-209ENST00000560519 TAGLN2P37802 199 aaKnown RBP6.46□□□□□ -1.38
HERC1-209ENST00000560519 GNG5P63218 68 aa6.46□□□□□ -1.38
HERC1-209ENST00000560519 TDRG1Q3Y452 100 aa6.46□□□□□ -1.38
HERC1-209ENST00000560519 MUC21Q5SSG8 566 aa6.46□□□□□ -1.38
HERC1-209ENST00000560519 Q6AWC8 147 aa6.46□□□□□ -1.38
HERC1-209ENST00000560519 OR4C5Q8NGB2 326 aa6.46□□□□□ -1.38
HERC1-209ENST00000560519 KRTAP29-1A8MX34 341 aaPredicted RBP6.45□□□□□ -1.38
HERC1-209ENST00000560519 M0R2P5 195 aa6.45□□□□□ -1.38
HERC1-209ENST00000560519 PEX7O00628 323 aa6.45□□□□□ -1.38
HERC1-209ENST00000560519 CIDEAO60543 219 aa6.45□□□□□ -1.38
HERC1-209ENST00000560519 TMEM183BQ1AE95 376 aa6.45□□□□□ -1.38
HERC1-209ENST00000560519 OR10J3Q5JRS4 329 aa6.45□□□□□ -1.38
HERC1-209ENST00000560519 SERTAD4-AS1Q5TG53 156 aa6.45□□□□□ -1.38
HERC1-209ENST00000560519 TMEM183AQ8IXX5 376 aa6.45□□□□□ -1.38
HERC1-209ENST00000560519 TMEM75Q8N9X5 138 aa6.45□□□□□ -1.38
HERC1-209ENST00000560519 TM2D2Q9BX73 214 aa6.45□□□□□ -1.38
HERC1-209ENST00000560519 Q9HAA7 133 aa6.45□□□□□ -1.38
HERC1-209ENST00000560519 GNG13Q9P2W3 67 aa6.45□□□□□ -1.38
HERC1-209ENST00000560519 S100A9P06702 114 aaKnown RBP6.44□□□□□ -1.38
HERC1-209ENST00000560519 PFN1P07737 140 aaKnown RBP6.44□□□□□ -1.38
HERC1-209ENST00000560519 FLI1Q01543 452 aaPredicted RBP6.44□□□□□ -1.38
HERC1-209ENST00000560519 RHOHQ15669 191 aa6.44□□□□□ -1.38
HERC1-209ENST00000560519 SAPCD1Q5SSQ6 148 aa6.44□□□□□ -1.38
HERC1-209ENST00000560519 LINC00528Q8N1L1 170 aa6.44□□□□□ -1.38
HERC1-209ENST00000560519 PRADC1Q9BSG0 188 aa6.44□□□□□ -1.38
HERC1-209ENST00000560519 TREM1Q9NP99 234 aa6.44□□□□□ -1.38
HERC1-209ENST00000560519 NAGKQ9UJ70 344 aa6.44□□□□□ -1.38
HERC1-209ENST00000560519 PSG8Q9UQ74 426 aa6.44□□□□□ -1.38
HERC1-209ENST00000560519 VPS13BQ7Z7G8 4022 aa6.44□□□□□ -1.38
HERC1-209ENST00000560519 TRAV8-1A0A0A6YYK1 113 aa6.43□□□□□ -1.38
HERC1-209ENST00000560519 TRAV21A0A0B4J279 112 aa6.43□□□□□ -1.38
HERC1-209ENST00000560519 AKR1C3P42330 323 aa6.43□□□□□ -1.38
HERC1-209ENST00000560519 UBE2G1P62253 170 aa6.43□□□□□ -1.38
HERC1-209ENST00000560519 CCL20P78556 96 aa6.43□□□□□ -1.38
HERC1-209ENST00000560519 TOR2AQ5JU69 321 aa6.43□□□□□ -1.38
HERC1-209ENST00000560519 TEX261Q6UWH6 196 aa6.43□□□□□ -1.38
HERC1-209ENST00000560519 Q6ZSA8 131 aa6.43□□□□□ -1.38
HERC1-209ENST00000560519 PRNTQ86SH4 94 aa6.43□□□□□ -1.38
HERC1-209ENST00000560519 FMC1Q96HJ9 113 aa6.43□□□□□ -1.38
HERC1-209ENST00000560519 KCNS1Q96KK3 526 aa6.43□□□□□ -1.38
HERC1-209ENST00000560519 TRBV6-4A0A1B0GX49 114 aa6.42□□□□□ -1.38
HERC1-209ENST00000560519 PDE6DO43924 150 aa6.42□□□□□ -1.38
HERC1-209ENST00000560519 BCL2P10415 239 aa6.42□□□□□ -1.38
HERC1-209ENST00000560519 GATA1P15976 413 aaPredicted RBP6.42□□□□□ -1.38
HERC1-209ENST00000560519 MEF2BQ02080 365 aaPredicted RBP6.42□□□□□ -1.38
HERC1-209ENST00000560519 SMUG1Q53HV7 270 aa6.42□□□□□ -1.38
HERC1-209ENST00000560519 LELP1Q5T871 98 aa6.42□□□□□ -1.38
HERC1-209ENST00000560519 Q6ZQT7 251 aa6.42□□□□□ -1.38
HERC1-209ENST00000560519 SDF2L1Q9HCN8 221 aa6.42□□□□□ -1.38
HERC1-209ENST00000560519 VAX2Q9UIW0 290 aa6.42□□□□□ -1.38
HERC1-209ENST00000560519 ZFP30Q9Y2G7 519 aa6.42□□□□□ -1.38
HERC1-209ENST00000560519 TRAV8-3A0A0A6YYJ7 113 aa6.41□□□□□ -1.38
HERC1-209ENST00000560519 TRAV34A0A0B4J273 112 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms