RNA–Protein interactions for RNA: ENST00000560514.1

TSPAN3-208, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 638 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-208ENST00000560514 OR2G3Q8NGZ4 309 aa11.7□□□□□ -0.54
TSPAN3-208ENST00000560514 KCNS1Q96KK3 526 aa11.7□□□□□ -0.54
TSPAN3-208ENST00000560514 TRBV6-4A0A1B0GX49 114 aa11.69□□□□□ -0.54
TSPAN3-208ENST00000560514 GNRH2O43555 120 aa11.69□□□□□ -0.54
TSPAN3-208ENST00000560514 CIDEAO60543 219 aa11.69□□□□□ -0.54
TSPAN3-208ENST00000560514 MBP02144 154 aa11.69□□□□□ -0.54
TSPAN3-208ENST00000560514 SERF2P84101 59 aa11.69□□□□□ -0.54
TSPAN3-208ENST00000560514 SUN5Q8TC36 379 aa11.69□□□□□ -0.54
TSPAN3-208ENST00000560514 PSMG3Q9BT73 122 aaPredicted RBP11.69□□□□□ -0.54
TSPAN3-208ENST00000560514 GOLT1AQ6ZVE7 132 aa11.68□□□□□ -0.54
TSPAN3-208ENST00000560514 ASB13Q8WXK3 278 aa11.68□□□□□ -0.54
TSPAN3-208ENST00000560514 AQP10Q96PS8 301 aa11.68□□□□□ -0.54
TSPAN3-208ENST00000560514 TREM1Q9NP99 234 aa11.68□□□□□ -0.54
TSPAN3-208ENST00000560514 STAG3L2P0CL84 134 aa11.67□□□□□ -0.54
TSPAN3-208ENST00000560514 STAG3L3P0CL85 134 aa11.67□□□□□ -0.54
TSPAN3-208ENST00000560514 RAB2AP61019 212 aa11.67□□□□□ -0.54
TSPAN3-208ENST00000560514 TVP23CQ96ET8 276 aa11.67□□□□□ -0.54
TSPAN3-208ENST00000560514 SDF2L1Q9HCN8 221 aa11.67□□□□□ -0.54
TSPAN3-208ENST00000560514 ALG5Q9Y673 324 aa11.67□□□□□ -0.54
TSPAN3-208ENST00000560514 TRAV8-1A0A0A6YYK1 113 aa11.66□□□□□ -0.54
TSPAN3-208ENST00000560514 IGHV3-73A0A0B4J1V6 119 aa11.66□□□□□ -0.54
TSPAN3-208ENST00000560514 K7EQM0 130 aa11.66□□□□□ -0.54
TSPAN3-208ENST00000560514 DAZ4Q86SG3 579 aaKnown RBP11.66□□□□□ -0.54
TSPAN3-208ENST00000560514 Q8N3U1 123 aa11.66□□□□□ -0.54
TSPAN3-208ENST00000560514 DAZ3Q9NR90 486 aaKnown RBP11.66□□□□□ -0.54
TSPAN3-208ENST00000560514 IGKV2D-24A0A075B6R9 120 aa11.65□□□□□ -0.54
TSPAN3-208ENST00000560514 PTTG1O95997 202 aa11.65□□□□□ -0.54
TSPAN3-208ENST00000560514 IGLV2-11P01706 119 aa11.65□□□□□ -0.54
TSPAN3-208ENST00000560514 TYMSP04818 313 aa11.65□□□□□ -0.54
TSPAN3-208ENST00000560514 CDC34P49427 236 aaPredicted RBP11.65□□□□□ -0.54
TSPAN3-208ENST00000560514 ZNF876PQ49A33 203 aa11.65□□□□□ -0.54
TSPAN3-208ENST00000560514 C5orf17Q8NAS9 161 aa11.65□□□□□ -0.54
TSPAN3-208ENST00000560514 RAB24Q969Q5 203 aa11.65□□□□□ -0.54
TSPAN3-208ENST00000560514 NDFIP1Q9BT67 221 aa11.65□□□□□ -0.54
TSPAN3-208ENST00000560514 MED28Q9H204 178 aa11.65□□□□□ -0.54
TSPAN3-208ENST00000560514 TNFSF18Q9UNG2 199 aa11.65□□□□□ -0.54
TSPAN3-208ENST00000560514 URGCP-MRPS24S4R325 110 aa11.65□□□□□ -0.54
TSPAN3-208ENST00000560514 RNF222A6NCQ9 220 aa11.64□□□□□ -0.55
TSPAN3-208ENST00000560514 TAAR5O14804 337 aa11.64□□□□□ -0.55
TSPAN3-208ENST00000560514 EIF3GO75821 320 aaKnown RBP eCLIP11.64□□□□□ -0.55
TSPAN3-208ENST00000560514 SEC11BP0C7V7 166 aa11.64□□□□□ -0.55
TSPAN3-208ENST00000560514 ARL14EPLP0DKL9 152 aa11.64□□□□□ -0.55
TSPAN3-208ENST00000560514 PTH2Q96A98 100 aa11.64□□□□□ -0.55
TSPAN3-208ENST00000560514 TMEM167BQ9NRX6 74 aa11.64□□□□□ -0.55
TSPAN3-208ENST00000560514 RPH3ALQ9UNE2 315 aa11.64□□□□□ -0.55
TSPAN3-208ENST00000560514 CXorf1O96002 111 aa11.63□□□□□ -0.55
TSPAN3-208ENST00000560514 TCRAP04437 139 aa11.63□□□□□ -0.55
TSPAN3-208ENST00000560514 MGST1P10620 155 aaKnown RBP11.63□□□□□ -0.55
TSPAN3-208ENST00000560514 ATP6V0CP27449 155 aa11.63□□□□□ -0.55
TSPAN3-208ENST00000560514 GCHFRP30047 84 aa11.63□□□□□ -0.55
TSPAN3-208ENST00000560514 CFAP126Q5VTH2 177 aa11.63□□□□□ -0.55
TSPAN3-208ENST00000560514 ACTR3CQ9C0K3 210 aaPredicted RBP11.63□□□□□ -0.55
TSPAN3-208ENST00000560514 EPDR1Q9UM22 224 aa11.63□□□□□ -0.55
TSPAN3-208ENST00000560514 HMGB3O15347 200 aaKnown RBP11.62□□□□□ -0.55
TSPAN3-208ENST00000560514 SAPCD1Q5SSQ6 148 aa11.62□□□□□ -0.55
TSPAN3-208ENST00000560514 HSD17B11Q8NBQ5 300 aa11.62□□□□□ -0.55
TSPAN3-208ENST00000560514 SUMO1P63165 101 aaKnown RBP11.61□□□□□ -0.55
TSPAN3-208ENST00000560514 GNG5P63218 68 aa11.61□□□□□ -0.55
TSPAN3-208ENST00000560514 INO80EQ8NBZ0 244 aaPredicted RBP11.61□□□□□ -0.55
TSPAN3-208ENST00000560514 DAZAP1Q96EP5 407 aaKnown RBP11.61□□□□□ -0.55
TSPAN3-208ENST00000560514 PSG8Q9UQ74 426 aa11.61□□□□□ -0.55
TSPAN3-208ENST00000560514 A0A087WWC5 75 aa11.6□□□□□ -0.55
TSPAN3-208ENST00000560514 A0A1W2PRE2 83 aa11.6□□□□□ -0.55
TSPAN3-208ENST00000560514 F6UZH7 168 aa11.6□□□□□ -0.55
TSPAN3-208ENST00000560514 GIPP09681 153 aaPredicted RBP11.6□□□□□ -0.55
TSPAN3-208ENST00000560514 HNRNPA3P51991 378 aaKnown RBP11.6□□□□□ -0.55
TSPAN3-208ENST00000560514 C14orf177Q52M58 125 aa11.6□□□□□ -0.55
TSPAN3-208ENST00000560514 SMUG1Q53HV7 270 aa11.6□□□□□ -0.55
TSPAN3-208ENST00000560514 PKHD1L1Q86WI1 4243 aa11.59□□□□□ -0.55
TSPAN3-208ENST00000560514 GAGE12JA6NER3 117 aa11.59□□□□□ -0.55
TSPAN3-208ENST00000560514 FLI1Q01543 452 aaPredicted RBP11.59□□□□□ -0.55
TSPAN3-208ENST00000560514 GAGE1Q13065 139 aa11.59□□□□□ -0.55
TSPAN3-208ENST00000560514 GAGE4Q13068 117 aa11.59□□□□□ -0.55
TSPAN3-208ENST00000560514 GAGE5Q13069 117 aa11.59□□□□□ -0.55
TSPAN3-208ENST00000560514 GAGE13Q4V321 117 aa11.59□□□□□ -0.55
TSPAN3-208ENST00000560514 TMEM75Q8N9X5 138 aa11.59□□□□□ -0.55
TSPAN3-208ENST00000560514 NKX6-2Q9C056 277 aaPredicted RBP11.59□□□□□ -0.55
TSPAN3-208ENST00000560514 BORCS7-ASMTA0A0B4J1R7 106 aa11.58□□□□□ -0.56
TSPAN3-208ENST00000560514 ZNF80P51504 273 aaPredicted RBP11.58□□□□□ -0.56
TSPAN3-208ENST00000560514 ZFP69Q49AA0 526 aa11.58□□□□□ -0.56
TSPAN3-208ENST00000560514 Q5BKY6 102 aa11.58□□□□□ -0.56
TSPAN3-208ENST00000560514 PIK3CD-AS1Q5SR53 167 aa11.58□□□□□ -0.56
TSPAN3-208ENST00000560514 KCNIP4Q6PIL6 250 aa11.58□□□□□ -0.56
TSPAN3-208ENST00000560514 DPPA3Q6W0C5 159 aa11.58□□□□□ -0.56
TSPAN3-208ENST00000560514 CYB561D1Q8N8Q1 229 aa11.58□□□□□ -0.56
TSPAN3-208ENST00000560514 KLK12Q9UKR0 248 aa11.58□□□□□ -0.56
TSPAN3-208ENST00000560514 GCGP01275 180 aa11.57□□□□□ -0.56
TSPAN3-208ENST00000560514 MT1HL1P0DM35 61 aa11.57□□□□□ -0.56
TSPAN3-208ENST00000560514 UBE2WQ96B02 151 aa11.57□□□□□ -0.56
TSPAN3-208ENST00000560514 SGK494Q96LW2 274 aa11.57□□□□□ -0.56
TSPAN3-208ENST00000560514 C9orf85Q96MD7 179 aa11.57□□□□□ -0.56
TSPAN3-208ENST00000560514 C11orf21Q9P2W6 132 aa11.57□□□□□ -0.56
TSPAN3-208ENST00000560514 ELOBQ15370 118 aa11.56□□□□□ -0.56
TSPAN3-208ENST00000560514 Q6ZRU5 148 aa11.56□□□□□ -0.56
TSPAN3-208ENST00000560514 RNF213Q63HN8 5207 aa11.56□□□□□ -0.56
TSPAN3-208ENST00000560514 FABP5P3A8MUU1 101 aa11.55□□□□□ -0.56
TSPAN3-208ENST00000560514 FGF8P55075 233 aaPredicted RBP11.55□□□□□ -0.56
TSPAN3-208ENST00000560514 ZNF506Q5JVG8 444 aa11.55□□□□□ -0.56
TSPAN3-208ENST00000560514 PRNTQ86SH4 94 aa11.55□□□□□ -0.56
TSPAN3-208ENST00000560514 LRP2P98164 4655 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms