RNA–Protein interactions for RNA: ENST00000560414.1

IDH3A-219, Transcript of isocitrate dehydrogenase 3 (NAD(+)) alpha, humanhuman

TSL 2

Gene IDH3A, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3A-219ENST00000560414 ZNF345Q14585 488 aa10.07□□□□□ -0.8
IDH3A-219ENST00000560414 SAPCD1Q5SSQ6 148 aa10.07□□□□□ -0.8
IDH3A-219ENST00000560414 NEGR1Q7Z3B1 354 aa10.07□□□□□ -0.8
IDH3A-219ENST00000560414 ZNF575Q86XF7 245 aa10.07□□□□□ -0.8
IDH3A-219ENST00000560414 LOC100131303A0A0U1RQF7 123 aa10.06□□□□□ -0.8
IDH3A-219ENST00000560414 FBLL1A6NHQ2 334 aaKnown RBP10.06□□□□□ -0.8
IDH3A-219ENST00000560414 HMSDA8MTL9 139 aa10.06□□□□□ -0.8
IDH3A-219ENST00000560414 SIVA1O15304 175 aa10.06□□□□□ -0.8
IDH3A-219ENST00000560414 SRIP30626 198 aa10.06□□□□□ -0.8
IDH3A-219ENST00000560414 ZNF876PQ49A33 203 aa10.06□□□□□ -0.8
IDH3A-219ENST00000560414 DPPA3Q6W0C5 159 aa10.06□□□□□ -0.8
IDH3A-219ENST00000560414 IGKV3D-20A0A0C4DH25 116 aa10.05□□□□□ -0.8
IDH3A-219ENST00000560414 A0A1W2PPQ1 181 aa10.05□□□□□ -0.8
IDH3A-219ENST00000560414 RNASE3P12724 160 aaKnown RBP10.05□□□□□ -0.8
IDH3A-219ENST00000560414 PPT1P50897 306 aa10.05□□□□□ -0.8
IDH3A-219ENST00000560414 Q86TA4 180 aa10.05□□□□□ -0.8
IDH3A-219ENST00000560414 PCNPQ8WW12 178 aaKnown RBP10.05□□□□□ -0.8
IDH3A-219ENST00000560414 HIST1H2BAQ96A08 127 aa10.05□□□□□ -0.8
IDH3A-219ENST00000560414 C9orf85Q96MD7 179 aa10.05□□□□□ -0.8
IDH3A-219ENST00000560414 ZNF471Q9BX82 626 aaPredicted RBP10.05□□□□□ -0.8
IDH3A-219ENST00000560414 NKX6-2Q9C056 277 aaPredicted RBP10.05□□□□□ -0.8
IDH3A-219ENST00000560414 IGHV3-73A0A0B4J1V6 119 aa10.04□□□□□ -0.8
IDH3A-219ENST00000560414 A0A0D9SG52 128 aa10.04□□□□□ -0.8
IDH3A-219ENST00000560414 A0A1B0GV50 99 aa10.04□□□□□ -0.8
IDH3A-219ENST00000560414 PGPEP1LA6NFU8 196 aa10.04□□□□□ -0.8
IDH3A-219ENST00000560414 ORM1P02763 201 aa10.04□□□□□ -0.8
IDH3A-219ENST00000560414 CST9LP1Q5W188 147 aa10.04□□□□□ -0.8
IDH3A-219ENST00000560414 STOML3Q8TAV4 291 aa10.04□□□□□ -0.8
IDH3A-219ENST00000560414 FAM213BQ8TBF2 198 aa10.04□□□□□ -0.8
IDH3A-219ENST00000560414 KANTRA0A1W2PQU2 76 aa10.03□□□□□ -0.8
IDH3A-219ENST00000560414 C9orf118A6NHY6 69 aa10.03□□□□□ -0.8
IDH3A-219ENST00000560414 FABP5P3A8MUU1 101 aa10.03□□□□□ -0.8
IDH3A-219ENST00000560414 RS1O15537 224 aa10.03□□□□□ -0.8
IDH3A-219ENST00000560414 BCL2L11O43521 198 aa10.03□□□□□ -0.8
IDH3A-219ENST00000560414 SEC11BP0C7V7 166 aa10.03□□□□□ -0.8
IDH3A-219ENST00000560414 GATA1P15976 413 aaPredicted RBP10.03□□□□□ -0.8
IDH3A-219ENST00000560414 CRIP1P50238 77 aa10.03□□□□□ -0.8
IDH3A-219ENST00000560414 LINC00315P59091 139 aa10.03□□□□□ -0.8
IDH3A-219ENST00000560414 CT83Q5H943 113 aa10.03□□□□□ -0.8
IDH3A-219ENST00000560414 ZNF506Q5JVG8 444 aa10.03□□□□□ -0.8
IDH3A-219ENST00000560414 CFAP126Q5VTH2 177 aa10.03□□□□□ -0.8
IDH3A-219ENST00000560414 SFT2D1Q8WV19 159 aa10.03□□□□□ -0.8
IDH3A-219ENST00000560414 ZC2HC1AQ96GY0 325 aa10.03□□□□□ -0.8
IDH3A-219ENST00000560414 PAGE4O60829 102 aa10.02□□□□□ -0.81
IDH3A-219ENST00000560414 TXNDC17Q9BRA2 123 aa10.02□□□□□ -0.81
IDH3A-219ENST00000560414 TNFRSF18Q9Y5U5 241 aa10.02□□□□□ -0.81
IDH3A-219ENST00000560414 UMAD1C9J7I0 102 aa10.01□□□□□ -0.81
IDH3A-219ENST00000560414 M0R036 132 aa10.01□□□□□ -0.81
IDH3A-219ENST00000560414 S100A4P26447 101 aaKnown RBP10.01□□□□□ -0.81
IDH3A-219ENST00000560414 UBE2G1P62253 170 aa10.01□□□□□ -0.81
IDH3A-219ENST00000560414 TMUB2Q71RG4 321 aa10.01□□□□□ -0.81
IDH3A-219ENST00000560414 WFDC10BQ8IUB3 73 aa10.01□□□□□ -0.81
IDH3A-219ENST00000560414 SLC25A29Q8N8R3 303 aa10.01□□□□□ -0.81
IDH3A-219ENST00000560414 NHLRC2Q8NBF2 726 aa10.01□□□□□ -0.81
IDH3A-219ENST00000560414 MBD3L1Q8WWY6 194 aa10.01□□□□□ -0.81
IDH3A-219ENST00000560414 C16orf90A8MZG2 172 aa10□□□□□ -0.81
IDH3A-219ENST00000560414 B4DEV8 164 aa10□□□□□ -0.81
IDH3A-219ENST00000560414 SH2D1AO60880 128 aa10□□□□□ -0.81
IDH3A-219ENST00000560414 ASIPP42127 132 aa10□□□□□ -0.81
IDH3A-219ENST00000560414 PTH2Q96A98 100 aa10□□□□□ -0.81
IDH3A-219ENST00000560414 FMC1Q96HJ9 113 aa10□□□□□ -0.81
IDH3A-219ENST00000560414 ZFP30Q9Y2G7 519 aa10□□□□□ -0.81
IDH3A-219ENST00000560414 LRP1BQ9NZR2 4599 aa10□□□□□ -0.81
IDH3A-219ENST00000560414 RYR1P21817 5038 aa10□□□□□ -0.81
IDH3A-219ENST00000560414 GRIFINA4D1Z8 144 aa9.99□□□□□ -0.81
IDH3A-219ENST00000560414 H3BVH4 76 aa9.99□□□□□ -0.81
IDH3A-219ENST00000560414 PFDN1O60925 122 aa9.99□□□□□ -0.81
IDH3A-219ENST00000560414 AKR1C3P42330 323 aa9.99□□□□□ -0.81
IDH3A-219ENST00000560414 LGALSLQ3ZCW2 172 aaPredicted RBP9.99□□□□□ -0.81
IDH3A-219ENST00000560414 Q6ZRN7 208 aaPredicted RBP9.99□□□□□ -0.81
IDH3A-219ENST00000560414 COX8CQ7Z4L0 72 aa9.99□□□□□ -0.81
IDH3A-219ENST00000560414 SPATA12Q7Z6I5 190 aa9.99□□□□□ -0.81
IDH3A-219ENST00000560414 JPT2Q9H910 190 aa9.99□□□□□ -0.81
IDH3A-219ENST00000560414 LY96Q9Y6Y9 160 aa9.99□□□□□ -0.81
IDH3A-219ENST00000560414 TRBV6-4A0A1B0GX49 114 aa9.98□□□□□ -0.81
IDH3A-219ENST00000560414 KRBOX1C9JBD0 128 aa9.98□□□□□ -0.81
IDH3A-219ENST00000560414 LTAP01374 205 aa9.98□□□□□ -0.81
IDH3A-219ENST00000560414 BTF3P20290 206 aaKnown RBP9.98□□□□□ -0.81
IDH3A-219ENST00000560414 EIF5AP63241 154 aaKnown RBP9.98□□□□□ -0.81
IDH3A-219ENST00000560414 FAM162BQ5T6X4 162 aa9.98□□□□□ -0.81
IDH3A-219ENST00000560414 Q6ZSN1 163 aa9.98□□□□□ -0.81
IDH3A-219ENST00000560414 TCEAL7Q9BRU2 100 aa9.98□□□□□ -0.81
IDH3A-219ENST00000560414 PRADC1Q9BSG0 188 aa9.98□□□□□ -0.81
IDH3A-219ENST00000560414 TMSB15BA0A087X1C1 80 aa9.97□□□□□ -0.81
IDH3A-219ENST00000560414 TRBV6-1A0A0K0K1D8 114 aa9.97□□□□□ -0.81
IDH3A-219ENST00000560414 CIDEAO60543 219 aa9.97□□□□□ -0.81
IDH3A-219ENST00000560414 ARMS2P0C7Q2 107 aa9.97□□□□□ -0.81
IDH3A-219ENST00000560414 TPT1P13693 172 aaKnown RBP9.97□□□□□ -0.81
IDH3A-219ENST00000560414 KRTAP10-2P60368 255 aa9.97□□□□□ -0.81
IDH3A-219ENST00000560414 RHOHQ15669 191 aa9.97□□□□□ -0.81
IDH3A-219ENST00000560414 ZNF674Q2M3X9 581 aa9.97□□□□□ -0.81
IDH3A-219ENST00000560414 SH2D6Q7Z4S9 175 aa9.97□□□□□ -0.81
IDH3A-219ENST00000560414 SAMD10Q9BYL1 202 aa9.97□□□□□ -0.81
IDH3A-219ENST00000560414 KRTAP17-1Q9BYP8 105 aa9.97□□□□□ -0.81
IDH3A-219ENST00000560414 PARLQ9H300 379 aa9.97□□□□□ -0.81
IDH3A-219ENST00000560414 IL36BQ9NZH7 164 aa9.97□□□□□ -0.81
IDH3A-219ENST00000560414 TRAV9-2A0A087WT02 112 aa9.96□□□□□ -0.82
IDH3A-219ENST00000560414 CCL20P78556 96 aa9.96□□□□□ -0.82
IDH3A-219ENST00000560414 SYT8Q8NBV8 401 aa9.96□□□□□ -0.82
IDH3A-219ENST00000560414 A8MWV9 139 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms