RNA–Protein interactions for RNA: ENST00000560379.1

USP8-210, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 2

Gene USP8, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-210ENST00000560379 C2orf66Q6UXQ4 117 aa4.35□□□□□ -1.71
USP8-210ENST00000560379 KTN1-AS1Q86SY8 53 aa4.35□□□□□ -1.71
USP8-210ENST00000560379 ZNF429Q86V71 674 aa4.35□□□□□ -1.71
USP8-210ENST00000560379 C2orf50Q96LR7 162 aa4.35□□□□□ -1.71
USP8-210ENST00000560379 YPEL2Q96QA6 119 aa4.35□□□□□ -1.71
USP8-210ENST00000560379 WDR61Q9GZS3 305 aaKnown RBP4.35□□□□□ -1.71
USP8-210ENST00000560379 ATG5Q9H1Y0 275 aa4.35□□□□□ -1.71
USP8-210ENST00000560379 ZNF706Q9Y5V0 76 aaPredicted RBP4.35□□□□□ -1.71
USP8-210ENST00000560379 TENM1Q9UKZ4 2725 aa4.35□□□□□ -1.71
USP8-210ENST00000560379 IGHV3-35A0A0C4DH35 117 aa4.34□□□□□ -1.71
USP8-210ENST00000560379 TMEM235A6NFC5 223 aa4.34□□□□□ -1.71
USP8-210ENST00000560379 ZNF705GA8MUZ8 300 aaPredicted RBP4.34□□□□□ -1.71
USP8-210ENST00000560379 GGTLC3B5MD39 225 aa4.34□□□□□ -1.71
USP8-210ENST00000560379 H3BUX3 64 aa4.34□□□□□ -1.71
USP8-210ENST00000560379 MT-ND4LP03901 98 aa4.34□□□□□ -1.71
USP8-210ENST00000560379 AKAIN1P0CW23 69 aa4.34□□□□□ -1.71
USP8-210ENST00000560379 BRS3P32247 399 aa4.34□□□□□ -1.71
USP8-210ENST00000560379 TGFBR1P36897 503 aa4.34□□□□□ -1.71
USP8-210ENST00000560379 LSM3P62310 102 aaKnown RBP4.34□□□□□ -1.71
USP8-210ENST00000560379 CXCL6P80162 114 aa4.34□□□□□ -1.71
USP8-210ENST00000560379 VMA21Q3ZAQ7 101 aa4.34□□□□□ -1.71
USP8-210ENST00000560379 ORMDL2Q53FV1 153 aa4.34□□□□□ -1.71
USP8-210ENST00000560379 CASC10Q5T4H9 136 aa4.34□□□□□ -1.71
USP8-210ENST00000560379 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.34□□□□□ -1.71
USP8-210ENST00000560379 SGMS2Q8NHU3 365 aa4.34□□□□□ -1.71
USP8-210ENST00000560379 C15orf40Q8WUR7 153 aa4.34□□□□□ -1.71
USP8-210ENST00000560379 S100A16Q96FQ6 103 aaKnown RBP4.34□□□□□ -1.71
USP8-210ENST00000560379 AP1S3Q96PC3 154 aa4.34□□□□□ -1.71
USP8-210ENST00000560379 OR4C12Q96R67 309 aa4.34□□□□□ -1.71
USP8-210ENST00000560379 OTORQ9NRC9 128 aa4.34□□□□□ -1.71
USP8-210ENST00000560379 TRAV9-1A0A075B6T8 112 aa4.33□□□□□ -1.72
USP8-210ENST00000560379 TRBV6-7A0A0A0MS04 114 aa4.33□□□□□ -1.72
USP8-210ENST00000560379 SMIM31A0A1B0GVY4 71 aa4.33□□□□□ -1.72
USP8-210ENST00000560379 A6NDX4 124 aa4.33□□□□□ -1.72
USP8-210ENST00000560379 KRBOX1C9JBD0 128 aa4.33□□□□□ -1.72
USP8-210ENST00000560379 KRTAP4-16G5E9R7 235 aaPredicted RBP4.33□□□□□ -1.72
USP8-210ENST00000560379 PRB3Q04118 309 aaPredicted RBP4.33□□□□□ -1.72
USP8-210ENST00000560379 MSMO1Q15800 293 aa4.33□□□□□ -1.72
USP8-210ENST00000560379 ZNF833PQ6ZTB9 187 aa4.33□□□□□ -1.72
USP8-210ENST00000560379 SPIN2AQ99865 258 aa4.33□□□□□ -1.72
USP8-210ENST00000560379 OPRPNQ99935 248 aaPredicted RBP4.33□□□□□ -1.72
USP8-210ENST00000560379 SPIN2BQ9BPZ2 258 aa4.33□□□□□ -1.72
USP8-210ENST00000560379 HDHD3Q9BSH5 251 aaPredicted RBP4.33□□□□□ -1.72
USP8-210ENST00000560379 SOX21Q9Y651 276 aaPredicted RBP4.33□□□□□ -1.72
USP8-210ENST00000560379 IGHV3-43A0A0B4J1X8 118 aa4.32□□□□□ -1.72
USP8-210ENST00000560379 IGHV1-3A0A0C4DH29 117 aa4.32□□□□□ -1.72
USP8-210ENST00000560379 IGKV1-6A0A0C4DH72 117 aa4.32□□□□□ -1.72
USP8-210ENST00000560379 B4DEV8 164 aa4.32□□□□□ -1.72
USP8-210ENST00000560379 COX7A2LO14548 114 aa4.32□□□□□ -1.72
USP8-210ENST00000560379 TRGC2P03986 189 aa4.32□□□□□ -1.72
USP8-210ENST00000560379 SAA2P0DJI9 122 aaPredicted RBP4.32□□□□□ -1.72
USP8-210ENST00000560379 INSL3P51460 131 aa4.32□□□□□ -1.72
USP8-210ENST00000560379 MEF2BQ02080 365 aaPredicted RBP4.32□□□□□ -1.72
USP8-210ENST00000560379 SSBP1Q04837 148 aaKnown RBP4.32□□□□□ -1.72
USP8-210ENST00000560379 HSD52Q0P140 79 aa4.32□□□□□ -1.72
USP8-210ENST00000560379 EBI3Q14213 229 aa4.32□□□□□ -1.72
USP8-210ENST00000560379 DYNAPQ8N1N2 210 aa4.32□□□□□ -1.72
USP8-210ENST00000560379 Q8N2B8 174 aa4.32□□□□□ -1.72
USP8-210ENST00000560379 Q8N377 158 aa4.32□□□□□ -1.72
USP8-210ENST00000560379 LEAP2Q969E1 77 aa4.32□□□□□ -1.72
USP8-210ENST00000560379 TOMM6Q96B49 74 aa4.32□□□□□ -1.72
USP8-210ENST00000560379 GINS4Q9BRT9 223 aa4.32□□□□□ -1.72
USP8-210ENST00000560379 Q9H3A6 140 aa4.32□□□□□ -1.72
USP8-210ENST00000560379 C16orf95Q9H693 158 aa4.32□□□□□ -1.72
USP8-210ENST00000560379 COMMD3Q9UBI1 195 aa4.32□□□□□ -1.72
USP8-210ENST00000560379 MOB4Q9Y3A3 225 aa4.32□□□□□ -1.72
USP8-210ENST00000560379 HILPDAQ9Y5L2 63 aa4.32□□□□□ -1.72
USP8-210ENST00000560379 TRBV20OR9-2A0A075B6H5 130 aa4.31□□□□□ -1.72
USP8-210ENST00000560379 TRAV41A0A0B4J266 112 aa4.31□□□□□ -1.72
USP8-210ENST00000560379 CLPSL1A2RUU4 121 aa4.31□□□□□ -1.72
USP8-210ENST00000560379 MEIS3P1A6NDR6 274 aa4.31□□□□□ -1.72
USP8-210ENST00000560379 SNAPC5O75971 98 aa4.31□□□□□ -1.72
USP8-210ENST00000560379 LTAP01374 205 aa4.31□□□□□ -1.72
USP8-210ENST00000560379 HLA-DQB1P01920 261 aa4.31□□□□□ -1.72
USP8-210ENST00000560379 RAB5CP51148 216 aa4.31□□□□□ -1.72
USP8-210ENST00000560379 GTF2H5Q6ZYL4 71 aa4.31□□□□□ -1.72
USP8-210ENST00000560379 SLC25A42Q86VD7 318 aa4.31□□□□□ -1.72
USP8-210ENST00000560379 Q8N6K4 173 aa4.31□□□□□ -1.72
USP8-210ENST00000560379 ZNF645Q8N7E2 425 aa4.31□□□□□ -1.72
USP8-210ENST00000560379 OR2T10Q8NGZ9 312 aa4.31□□□□□ -1.72
USP8-210ENST00000560379 UBALD1Q8TB05 177 aa4.31□□□□□ -1.72
USP8-210ENST00000560379 DEDD2Q8WXF8 326 aa4.31□□□□□ -1.72
USP8-210ENST00000560379 CYYR1Q96J86 154 aa4.31□□□□□ -1.72
USP8-210ENST00000560379 NAA38Q9BRA0 125 aaKnown RBP4.31□□□□□ -1.72
USP8-210ENST00000560379 SCRT2Q9NQ03 307 aa4.31□□□□□ -1.72
USP8-210ENST00000560379 ZNF492Q9P255 531 aa4.31□□□□□ -1.72
USP8-210ENST00000560379 IGLV8-61A0A075B6I0 122 aa4.3□□□□□ -1.72
USP8-210ENST00000560379 TRBV7-6A0A0J9YX20 115 aa4.3□□□□□ -1.72
USP8-210ENST00000560379 NDUFC2-KCTD14E9PQ53 114 aa4.3□□□□□ -1.72
USP8-210ENST00000560379 MPC2O95563 127 aa4.3□□□□□ -1.72
USP8-210ENST00000560379 IGKV1D-33P01593 117 aa4.3□□□□□ -1.72
USP8-210ENST00000560379 IGKV1-33P01594 117 aa4.3□□□□□ -1.72
USP8-210ENST00000560379 IGHV3-7P01780 117 aa4.3□□□□□ -1.72
USP8-210ENST00000560379 ELK1P19419 428 aa4.3□□□□□ -1.72
USP8-210ENST00000560379 PSMB8P28062 276 aa4.3□□□□□ -1.72
USP8-210ENST00000560379 LY6EQ16553 131 aa4.3□□□□□ -1.72
USP8-210ENST00000560379 TMEM241Q24JQ0 296 aa4.3□□□□□ -1.72
USP8-210ENST00000560379 PDPNQ86YL7 162 aa4.3□□□□□ -1.72
USP8-210ENST00000560379 C5orf56Q8N8D9 126 aa4.3□□□□□ -1.72
USP8-210ENST00000560379 ZNF709Q8N972 641 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms