RNA–Protein interactions for RNA: ENST00000560207.1

RABGGTA-215, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-215ENST00000560207 ARMS2P0C7Q2 107 aa8.53□□□□□ -1.04
RABGGTA-215ENST00000560207 RNASE3P12724 160 aaKnown RBP8.53□□□□□ -1.04
RABGGTA-215ENST00000560207 CT83Q5H943 113 aa8.53□□□□□ -1.04
RABGGTA-215ENST00000560207 ZFP82Q8N141 532 aa8.53□□□□□ -1.04
RABGGTA-215ENST00000560207 NAT8Q9UHE5 227 aa8.53□□□□□ -1.04
RABGGTA-215ENST00000560207 IGLL5B9A064 214 aa8.52□□□□□ -1.05
RABGGTA-215ENST00000560207 F5H768 121 aa8.52□□□□□ -1.05
RABGGTA-215ENST00000560207 RHODO00212 210 aa8.52□□□□□ -1.05
RABGGTA-215ENST00000560207 WDR73Q6P4I2 378 aa8.52□□□□□ -1.05
RABGGTA-215ENST00000560207 ZFP2Q6ZN57 461 aa8.52□□□□□ -1.05
RABGGTA-215ENST00000560207 LINC01551Q86U37 167 aa8.52□□□□□ -1.05
RABGGTA-215ENST00000560207 C15orf54Q8N8G6 183 aa8.52□□□□□ -1.05
RABGGTA-215ENST00000560207 OR4C5Q8NGB2 326 aa8.52□□□□□ -1.05
RABGGTA-215ENST00000560207 OR2D3Q8NGH3 330 aa8.52□□□□□ -1.05
RABGGTA-215ENST00000560207 PCNPQ8WW12 178 aaKnown RBP8.52□□□□□ -1.05
RABGGTA-215ENST00000560207 SSBP4Q9BWG4 385 aaPredicted RBP8.52□□□□□ -1.05
RABGGTA-215ENST00000560207 SCRT2Q9NQ03 307 aa8.52□□□□□ -1.05
RABGGTA-215ENST00000560207 MRPL16Q9NX20 251 aaKnown RBP8.52□□□□□ -1.05
RABGGTA-215ENST00000560207 PRO0255Q9UI72 69 aa8.52□□□□□ -1.05
RABGGTA-215ENST00000560207 IGHV4-4A0A075B6R2 117 aa8.51□□□□□ -1.05
RABGGTA-215ENST00000560207 FAM231BA6NCW3 169 aa8.51□□□□□ -1.05
RABGGTA-215ENST00000560207 A8MWL6 223 aa8.51□□□□□ -1.05
RABGGTA-215ENST00000560207 SNAI2O43623 268 aa8.51□□□□□ -1.05
RABGGTA-215ENST00000560207 HTN3P15516 51 aa8.51□□□□□ -1.05
RABGGTA-215ENST00000560207 ERVFC1-1P60608 527 aa8.51□□□□□ -1.05
RABGGTA-215ENST00000560207 CACNG7P62955 275 aa8.51□□□□□ -1.05
RABGGTA-215ENST00000560207 PNRC1Q12796 327 aaPredicted RBP8.51□□□□□ -1.05
RABGGTA-215ENST00000560207 NUDT10Q8NFP7 164 aa8.51□□□□□ -1.05
RABGGTA-215ENST00000560207 NUDT11Q96G61 164 aa8.51□□□□□ -1.05
RABGGTA-215ENST00000560207 RPP21Q9H633 154 aaKnown RBP8.51□□□□□ -1.05
RABGGTA-215ENST00000560207 OSTCQ9NRP0 149 aa8.51□□□□□ -1.05
RABGGTA-215ENST00000560207 TRGV4A0A0C4DH28 118 aa8.5□□□□□ -1.05
RABGGTA-215ENST00000560207 H3BVH4 76 aa8.5□□□□□ -1.05
RABGGTA-215ENST00000560207 RS1O15537 224 aa8.5□□□□□ -1.05
RABGGTA-215ENST00000560207 GATCO43716 136 aaKnown RBP8.5□□□□□ -1.05
RABGGTA-215ENST00000560207 SH2D6Q7Z4S9 175 aa8.5□□□□□ -1.05
RABGGTA-215ENST00000560207 GFRA4Q9GZZ7 299 aa8.5□□□□□ -1.05
RABGGTA-215ENST00000560207 NACAE9PAV3 2078 aa8.5□□□□□ -1.05
RABGGTA-215ENST00000560207 TMSB15BA0A087X1C1 80 aa8.49□□□□□ -1.05
RABGGTA-215ENST00000560207 GRIFINA4D1Z8 144 aa8.49□□□□□ -1.05
RABGGTA-215ENST00000560207 PGPEP1LA6NFU8 196 aa8.49□□□□□ -1.05
RABGGTA-215ENST00000560207 K7EN84 100 aa8.49□□□□□ -1.05
RABGGTA-215ENST00000560207 P0DMU3 169 aa8.49□□□□□ -1.05
RABGGTA-215ENST00000560207 FAM231AP0DMU4 169 aa8.49□□□□□ -1.05
RABGGTA-215ENST00000560207 FAM231CP0DMU5 169 aa8.49□□□□□ -1.05
RABGGTA-215ENST00000560207 SPANXN1Q5VSR9 72 aa8.49□□□□□ -1.05
RABGGTA-215ENST00000560207 FER1L6-AS1Q8NA97 138 aa8.49□□□□□ -1.05
RABGGTA-215ENST00000560207 APLNQ9ULZ1 77 aa8.49□□□□□ -1.05
RABGGTA-215ENST00000560207 HHLA3Q9XRX5 114 aa8.49□□□□□ -1.05
RABGGTA-215ENST00000560207 TENM2Q9NT68 2774 aa8.49□□□□□ -1.05
RABGGTA-215ENST00000560207 TRBV6-4A0A1B0GX49 114 aa8.48□□□□□ -1.05
RABGGTA-215ENST00000560207 NXPH4O95158 308 aa8.48□□□□□ -1.05
RABGGTA-215ENST00000560207 IGLC6P0CF74 106 aa8.48□□□□□ -1.05
RABGGTA-215ENST00000560207 FOXA3P55318 350 aaPredicted RBP8.48□□□□□ -1.05
RABGGTA-215ENST00000560207 FAM3BP58499 235 aaPredicted RBP8.48□□□□□ -1.05
RABGGTA-215ENST00000560207 CFAP126Q5VTH2 177 aa8.48□□□□□ -1.05
RABGGTA-215ENST00000560207 LGALS9CQ6DKI2 356 aa8.48□□□□□ -1.05
RABGGTA-215ENST00000560207 TMEM88Q6PEY1 159 aa8.48□□□□□ -1.05
RABGGTA-215ENST00000560207 BORCS7Q96B45 105 aa8.48□□□□□ -1.05
RABGGTA-215ENST00000560207 SFRP2Q96HF1 295 aa8.48□□□□□ -1.05
RABGGTA-215ENST00000560207 TRAV26-1A0A087WT03 109 aa8.47□□□□□ -1.05
RABGGTA-215ENST00000560207 LINC00862A6NCI5 91 aa8.47□□□□□ -1.05
RABGGTA-215ENST00000560207 M0R381 172 aa8.47□□□□□ -1.05
RABGGTA-215ENST00000560207 PPP1R2P9O14990 202 aa8.47□□□□□ -1.05
RABGGTA-215ENST00000560207 PAX4O43316 350 aa8.47□□□□□ -1.05
RABGGTA-215ENST00000560207 SFTA3P0C7M3 94 aa8.47□□□□□ -1.05
RABGGTA-215ENST00000560207 RPL23P62829 140 aaKnown RBP8.47□□□□□ -1.05
RABGGTA-215ENST00000560207 RPL19P84098 196 aaKnown RBP8.47□□□□□ -1.05
RABGGTA-215ENST00000560207 SRSF3P84103 164 aaKnown RBP8.47□□□□□ -1.05
RABGGTA-215ENST00000560207 FHL2Q14192 279 aa8.47□□□□□ -1.05
RABGGTA-215ENST00000560207 RNF212Q495C1 297 aa8.47□□□□□ -1.05
RABGGTA-215ENST00000560207 ZNF575Q86XF7 245 aa8.47□□□□□ -1.05
RABGGTA-215ENST00000560207 ISOC2Q96AB3 205 aa8.47□□□□□ -1.05
RABGGTA-215ENST00000560207 RNASE7Q9H1E1 156 aaKnown RBP8.47□□□□□ -1.05
RABGGTA-215ENST00000560207 DNAH7Q8WXX0 4024 aa8.47□□□□□ -1.05
RABGGTA-215ENST00000560207 C9JQL5 133 aa8.46□□□□□ -1.06
RABGGTA-215ENST00000560207 TRGC1P0CF51 173 aa8.46□□□□□ -1.06
RABGGTA-215ENST00000560207 SMIM17P0DL12 118 aa8.46□□□□□ -1.06
RABGGTA-215ENST00000560207 HOXA5P20719 270 aa8.46□□□□□ -1.06
RABGGTA-215ENST00000560207 CRYBA4P53673 196 aa8.46□□□□□ -1.06
RABGGTA-215ENST00000560207 RHOHQ15669 191 aa8.46□□□□□ -1.06
RABGGTA-215ENST00000560207 ADIRFQ15847 76 aa8.46□□□□□ -1.06
RABGGTA-215ENST00000560207 MRPL23Q16540 153 aaKnown RBP8.46□□□□□ -1.06
RABGGTA-215ENST00000560207 DMRTA1Q5VZB9 504 aa8.46□□□□□ -1.06
RABGGTA-215ENST00000560207 OR10G8Q8NGN5 311 aa8.46□□□□□ -1.06
RABGGTA-215ENST00000560207 TSKUQ8WUA8 353 aa8.46□□□□□ -1.06
RABGGTA-215ENST00000560207 ZNF479Q96JC4 524 aa8.46□□□□□ -1.06
RABGGTA-215ENST00000560207 AP1S3Q96PC3 154 aa8.46□□□□□ -1.06
RABGGTA-215ENST00000560207 PRADC1Q9BSG0 188 aa8.46□□□□□ -1.06
RABGGTA-215ENST00000560207 CNFNQ9BYD5 112 aa8.46□□□□□ -1.06
RABGGTA-215ENST00000560207 ICOSQ9Y6W8 199 aa8.46□□□□□ -1.06
RABGGTA-215ENST00000560207 GATA1P15976 413 aaPredicted RBP8.45□□□□□ -1.06
RABGGTA-215ENST00000560207 CTRLP40313 264 aa8.45□□□□□ -1.06
RABGGTA-215ENST00000560207 SMIM15Q7Z3B0 74 aa8.45□□□□□ -1.06
RABGGTA-215ENST00000560207 POM121L12Q8N7R1 296 aa8.45□□□□□ -1.06
RABGGTA-215ENST00000560207 LCE6AA0A183 80 aa8.44□□□□□ -1.06
RABGGTA-215ENST00000560207 IGHV3-53P01767 116 aa8.44□□□□□ -1.06
RABGGTA-215ENST00000560207 CCL18P55774 89 aa8.44□□□□□ -1.06
RABGGTA-215ENST00000560207 OR10AG1Q8NH19 301 aa8.44□□□□□ -1.06
RABGGTA-215ENST00000560207 FRZBQ92765 325 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms