RNA–Protein interactions for RNA: ENST00000559941.1

CHRNA3-207, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 4

Gene CHRNA3, Length 592 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-207ENST00000559941 IGKV3D-20A0A0C4DH25 116 aa13.86□□□□□ -0.19
CHRNA3-207ENST00000559941 FABP5P3A8MUU1 101 aa13.86□□□□□ -0.19
CHRNA3-207ENST00000559941 ERVFC1-1P60608 527 aa13.86□□□□□ -0.19
CHRNA3-207ENST00000559941 RHOHQ15669 191 aa13.86□□□□□ -0.19
CHRNA3-207ENST00000559941 PRADC1Q9BSG0 188 aa13.86□□□□□ -0.19
CHRNA3-207ENST00000559941 KRTAP4-5Q9BYR2 181 aa13.86□□□□□ -0.19
CHRNA3-207ENST00000559941 MAP1LC3B2A6NCE7 125 aa13.85□□□□□ -0.19
CHRNA3-207ENST00000559941 EREGO14944 169 aa13.85□□□□□ -0.19
CHRNA3-207ENST00000559941 Q86TA4 180 aa13.85□□□□□ -0.19
CHRNA3-207ENST00000559941 MAP1LC3BQ9GZQ8 125 aa13.85□□□□□ -0.19
CHRNA3-207ENST00000559941 MSRB1Q9NZV6 116 aa13.85□□□□□ -0.19
CHRNA3-207ENST00000559941 IGHV3-73A0A0B4J1V6 119 aa13.84□□□□□ -0.19
CHRNA3-207ENST00000559941 SMLR1H3BR10 107 aa13.84□□□□□ -0.19
CHRNA3-207ENST00000559941 PIK3CD-AS1Q5SR53 167 aa13.84□□□□□ -0.19
CHRNA3-207ENST00000559941 C10orf126Q8N4M7 172 aa13.84□□□□□ -0.19
CHRNA3-207ENST00000559941 PGPEP1Q9NXJ5 209 aa13.84□□□□□ -0.19
CHRNA3-207ENST00000559941 S100A4P26447 101 aaKnown RBP13.83□□□□□ -0.2
CHRNA3-207ENST00000559941 COX8CQ7Z4L0 72 aa13.83□□□□□ -0.2
CHRNA3-207ENST00000559941 IGHV3-38A0A0C4DH36 116 aa13.82□□□□□ -0.2
CHRNA3-207ENST00000559941 CRYGDP07320 174 aa13.82□□□□□ -0.2
CHRNA3-207ENST00000559941 MGST1P10620 155 aaKnown RBP13.82□□□□□ -0.2
CHRNA3-207ENST00000559941 ASIPP42127 132 aa13.82□□□□□ -0.2
CHRNA3-207ENST00000559941 CRIP1P50238 77 aa13.82□□□□□ -0.2
CHRNA3-207ENST00000559941 KCNRGQ8N5I3 272 aa13.82□□□□□ -0.2
CHRNA3-207ENST00000559941 MAPKAPK5-AS1Q8N8E1 139 aa13.82□□□□□ -0.2
CHRNA3-207ENST00000559941 STOML3Q8TAV4 291 aa13.82□□□□□ -0.2
CHRNA3-207ENST00000559941 ZFP30Q9Y2G7 519 aa13.82□□□□□ -0.2
CHRNA3-207ENST00000559941 A8MWV9 139 aa13.81□□□□□ -0.2
CHRNA3-207ENST00000559941 FHITP49789 147 aa13.81□□□□□ -0.2
CHRNA3-207ENST00000559941 ZNF345Q14585 488 aa13.81□□□□□ -0.2
CHRNA3-207ENST00000559941 ZFP2Q6ZN57 461 aa13.81□□□□□ -0.2
CHRNA3-207ENST00000559941 ZC2HC1AQ96GY0 325 aa13.81□□□□□ -0.2
CHRNA3-207ENST00000559941 FMC1Q96HJ9 113 aa13.81□□□□□ -0.2
CHRNA3-207ENST00000559941 PARLQ9H300 379 aa13.81□□□□□ -0.2
CHRNA3-207ENST00000559941 IL36BQ9NZH7 164 aa13.81□□□□□ -0.2
CHRNA3-207ENST00000559941 BOLA1Q9Y3E2 137 aa13.81□□□□□ -0.2
CHRNA3-207ENST00000559941 A0A087WTM6 91 aa13.8□□□□□ -0.2
CHRNA3-207ENST00000559941 B4DEV8 164 aa13.8□□□□□ -0.2
CHRNA3-207ENST00000559941 LINC01556Q5JQF7 62 aa13.8□□□□□ -0.2
CHRNA3-207ENST00000559941 DNLZQ5SXM8 178 aa13.8□□□□□ -0.2
CHRNA3-207ENST00000559941 TCEAL7Q9BRU2 100 aa13.8□□□□□ -0.2
CHRNA3-207ENST00000559941 TRAV8-6A0A0B4J262 113 aa13.79□□□□□ -0.2
CHRNA3-207ENST00000559941 TRBV6-1A0A0K0K1D8 114 aa13.79□□□□□ -0.2
CHRNA3-207ENST00000559941 KRBOX1C9JBD0 128 aa13.79□□□□□ -0.2
CHRNA3-207ENST00000559941 SEC11BP0C7V7 166 aa13.79□□□□□ -0.2
CHRNA3-207ENST00000559941 UBE2G1P62253 170 aa13.79□□□□□ -0.2
CHRNA3-207ENST00000559941 LGALSLQ3ZCW2 172 aaPredicted RBP13.79□□□□□ -0.2
CHRNA3-207ENST00000559941 CDPF1Q6NVV7 123 aa13.79□□□□□ -0.2
CHRNA3-207ENST00000559941 ATP6V0E2Q8NHE4 81 aa13.79□□□□□ -0.2
CHRNA3-207ENST00000559941 HMSDA8MTL9 139 aa13.78□□□□□ -0.2
CHRNA3-207ENST00000559941 OR10J3Q5JRS4 329 aa13.78□□□□□ -0.2
CHRNA3-207ENST00000559941 LELP1Q5T871 98 aa13.78□□□□□ -0.2
CHRNA3-207ENST00000559941 CST9LP1Q5W188 147 aa13.78□□□□□ -0.2
CHRNA3-207ENST00000559941 Q6ZSN1 163 aa13.78□□□□□ -0.2
CHRNA3-207ENST00000559941 Q8N1X5 172 aa13.78□□□□□ -0.2
CHRNA3-207ENST00000559941 OR11H4Q8NGC9 324 aa13.78□□□□□ -0.2
CHRNA3-207ENST00000559941 GTSF1LQ9H1H1 148 aa13.78□□□□□ -0.2
CHRNA3-207ENST00000559941 H3BVH4 76 aa13.77□□□□□ -0.21
CHRNA3-207ENST00000559941 SH2D1AO60880 128 aa13.77□□□□□ -0.21
CHRNA3-207ENST00000559941 ZNF674Q2M3X9 581 aa13.77□□□□□ -0.21
CHRNA3-207ENST00000559941 FAM162BQ5T6X4 162 aa13.77□□□□□ -0.21
CHRNA3-207ENST00000559941 UFSP1Q6NVU6 142 aa13.77□□□□□ -0.21
CHRNA3-207ENST00000559941 MBD3L1Q8WWY6 194 aa13.77□□□□□ -0.21
CHRNA3-207ENST00000559941 JPT2Q9H910 190 aa13.77□□□□□ -0.21
CHRNA3-207ENST00000559941 IBA57-AS1B1ANH7 110 aa13.76□□□□□ -0.21
CHRNA3-207ENST00000559941 M0R036 132 aa13.76□□□□□ -0.21
CHRNA3-207ENST00000559941 LTAP01374 205 aa13.76□□□□□ -0.21
CHRNA3-207ENST00000559941 ARMS2P0C7Q2 107 aa13.76□□□□□ -0.21
CHRNA3-207ENST00000559941 FUSP35637 526 aaKnown RBP eCLIP13.76□□□□□ -0.21
CHRNA3-207ENST00000559941 DMRTA1Q5VZB9 504 aa13.76□□□□□ -0.21
CHRNA3-207ENST00000559941 A0A0D9SG52 128 aa13.75□□□□□ -0.21
CHRNA3-207ENST00000559941 GRIFINA4D1Z8 144 aa13.75□□□□□ -0.21
CHRNA3-207ENST00000559941 UMAD1C9J7I0 102 aa13.75□□□□□ -0.21
CHRNA3-207ENST00000559941 PAGE4O60829 102 aa13.75□□□□□ -0.21
CHRNA3-207ENST00000559941 AKR1C3P42330 323 aa13.75□□□□□ -0.21
CHRNA3-207ENST00000559941 SYT8Q8NBV8 401 aa13.75□□□□□ -0.21
CHRNA3-207ENST00000559941 SAMD10Q9BYL1 202 aa13.75□□□□□ -0.21
CHRNA3-207ENST00000559941 LINC00694P0DN24 101 aa13.74□□□□□ -0.21
CHRNA3-207ENST00000559941 LINC01559Q495D7 138 aa13.74□□□□□ -0.21
CHRNA3-207ENST00000559941 FAM213BQ8TBF2 198 aa13.74□□□□□ -0.21
CHRNA3-207ENST00000559941 SFT2D1Q8WV19 159 aa13.74□□□□□ -0.21
CHRNA3-207ENST00000559941 ZNF471Q9BX82 626 aaPredicted RBP13.74□□□□□ -0.21
CHRNA3-207ENST00000559941 KANTRA0A1W2PQU2 76 aa13.73□□□□□ -0.21
CHRNA3-207ENST00000559941 GAGE12JA6NER3 117 aa13.73□□□□□ -0.21
CHRNA3-207ENST00000559941 RHODO00212 210 aa13.73□□□□□ -0.21
CHRNA3-207ENST00000559941 BCL2L11O43521 198 aa13.73□□□□□ -0.21
CHRNA3-207ENST00000559941 GAGE1Q13065 139 aa13.73□□□□□ -0.21
CHRNA3-207ENST00000559941 GAGE4Q13068 117 aa13.73□□□□□ -0.21
CHRNA3-207ENST00000559941 GAGE5Q13069 117 aa13.73□□□□□ -0.21
CHRNA3-207ENST00000559941 GAGE13Q4V321 117 aa13.73□□□□□ -0.21
CHRNA3-207ENST00000559941 SCRT2Q9NQ03 307 aa13.73□□□□□ -0.21
CHRNA3-207ENST00000559941 IGHV3-30P01768 117 aa13.72□□□□□ -0.21
CHRNA3-207ENST00000559941 IGHV3-33P01772 117 aa13.72□□□□□ -0.21
CHRNA3-207ENST00000559941 IGHV3-30-3P0DP02 117 aa13.72□□□□□ -0.21
CHRNA3-207ENST00000559941 IGHV3-30-5P0DP03 117 aa13.72□□□□□ -0.21
CHRNA3-207ENST00000559941 C14orf178Q8N769 122 aaPredicted RBP13.72□□□□□ -0.21
CHRNA3-207ENST00000559941 Q9UF83 564 aa13.72□□□□□ -0.21
CHRNA3-207ENST00000559941 PHLDA3Q9Y5J5 127 aa13.72□□□□□ -0.21
CHRNA3-207ENST00000559941 TMSB15BA0A087X1C1 80 aa13.71□□□□□ -0.21
CHRNA3-207ENST00000559941 S100A9P06702 114 aaKnown RBP13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms