RNA–Protein interactions for RNA: ENST00000559819.5

LRRC28-216, Transcript of leucine rich repeat containing 28, humanhuman

TSL 2

Gene LRRC28, Length 2,712 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-216ENST00000559819 DOPEY1Q5JWR5 2465 aa7.53□□□□□ -1.2
LRRC28-216ENST00000559819 A0A087WX48 190 aa7.53□□□□□ -1.2
LRRC28-216ENST00000559819 C9orf118A6NHY6 69 aa7.53□□□□□ -1.2
LRRC28-216ENST00000559819 IGKV3-20P01619 116 aa7.53□□□□□ -1.2
LRRC28-216ENST00000559819 FXYD2P54710 66 aa7.53□□□□□ -1.2
LRRC28-216ENST00000559819 RBX1P62877 108 aa7.53□□□□□ -1.2
LRRC28-216ENST00000559819 CHAC1Q9BUX1 264 aa7.53□□□□□ -1.2
LRRC28-216ENST00000559819 CHTOPQ9Y3Y2 248 aaKnown RBP7.53□□□□□ -1.2
LRRC28-216ENST00000559819 IGSF10Q6WRI0 2623 aa7.53□□□□□ -1.2
LRRC28-216ENST00000559819 DCANP1Q8TF63 244 aa7.53□□□□□ -1.2
LRRC28-216ENST00000559819 TRBV25-1A0A075B6N4 114 aa7.52□□□□□ -1.21
LRRC28-216ENST00000559819 TRAV12-3A0A0B4J271 114 aa7.52□□□□□ -1.21
LRRC28-216ENST00000559819 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.52□□□□□ -1.21
LRRC28-216ENST00000559819 K7ERJ3 54 aa7.52□□□□□ -1.21
LRRC28-216ENST00000559819 ZNF688P0C7X2 276 aa7.52□□□□□ -1.21
LRRC28-216ENST00000559819 PSMB8P28062 276 aa7.52□□□□□ -1.21
LRRC28-216ENST00000559819 RNF151Q2KHN1 245 aa7.52□□□□□ -1.21
LRRC28-216ENST00000559819 AP1S3Q96PC3 154 aa7.52□□□□□ -1.21
LRRC28-216ENST00000559819 DUX5Q96PT3 197 aa7.52□□□□□ -1.21
LRRC28-216ENST00000559819 SCGB3A1Q96QR1 104 aa7.52□□□□□ -1.21
LRRC28-216ENST00000559819 TRAV12-2A0A075B6T6 113 aa7.51□□□□□ -1.21
LRRC28-216ENST00000559819 GAGE10A6NGK3 116 aa7.51□□□□□ -1.21
LRRC28-216ENST00000559819 KLLNB2CW77 178 aa7.51□□□□□ -1.21
LRRC28-216ENST00000559819 PRB1P04280 392 aa7.51□□□□□ -1.21
LRRC28-216ENST00000559819 PSMG4Q5JS54 123 aa7.51□□□□□ -1.21
LRRC28-216ENST00000559819 TOMM6Q96B49 74 aa7.51□□□□□ -1.21
LRRC28-216ENST00000559819 CST9LQ9H4G1 147 aa7.51□□□□□ -1.21
LRRC28-216ENST00000559819 CRYBG3Q68DQ2 2970 aa7.51□□□□□ -1.21
LRRC28-216ENST00000559819 MUC4Q99102 2169 aa7.51□□□□□ -1.21
LRRC28-216ENST00000559819 A0A087WWL8 130 aa7.51□□□□□ -1.21
LRRC28-216ENST00000559819 MED14OSP0DP75 135 aa7.51□□□□□ -1.21
LRRC28-216ENST00000559819 LINC00315P59091 139 aa7.51□□□□□ -1.21
LRRC28-216ENST00000559819 ORMDL2Q53FV1 153 aa7.51□□□□□ -1.21
LRRC28-216ENST00000559819 C20orf78Q9BR46 151 aa7.51□□□□□ -1.21
LRRC28-216ENST00000559819 CSTL1Q9H114 145 aa7.51□□□□□ -1.21
LRRC28-216ENST00000559819 GAGE12BA1L429 117 aa7.5□□□□□ -1.21
LRRC28-216ENST00000559819 K7EMT4 169 aa7.5□□□□□ -1.21
LRRC28-216ENST00000559819 ID1P41134 155 aa7.5□□□□□ -1.21
LRRC28-216ENST00000559819 FAM159AQ6UWV7 190 aa7.5□□□□□ -1.21
LRRC28-216ENST00000559819 C2orf66Q6UXQ4 117 aa7.5□□□□□ -1.21
LRRC28-216ENST00000559819 KIF25-AS1Q9Y6Z4 181 aa7.5□□□□□ -1.21
LRRC28-216ENST00000559819 H7C1H1 209 aa7.5□□□□□ -1.21
LRRC28-216ENST00000559819 TGFAP01135 160 aa7.5□□□□□ -1.21
LRRC28-216ENST00000559819 CD7P09564 240 aa7.5□□□□□ -1.21
LRRC28-216ENST00000559819 UFSP1Q6NVU6 142 aa7.5□□□□□ -1.21
LRRC28-216ENST00000559819 LINC01356Q8N9X3 169 aa7.5□□□□□ -1.21
LRRC28-216ENST00000559819 HIGD1BQ9P298 99 aa7.5□□□□□ -1.21
LRRC28-216ENST00000559819 CACNA1AO00555 2505 aa7.5□□□□□ -1.21
LRRC28-216ENST00000559819 F8VRH5 84 aa7.5□□□□□ -1.21
LRRC28-216ENST00000559819 NEXN-AS1Q8NBZ9 246 aa7.5□□□□□ -1.21
LRRC28-216ENST00000559819 BAALCQ8WXS3 180 aa7.5□□□□□ -1.21
LRRC28-216ENST00000559819 POLQO75417 2590 aa7.49□□□□□ -1.21
LRRC28-216ENST00000559819 A0A096LNT2 108 aa7.49□□□□□ -1.21
LRRC28-216ENST00000559819 TRAV12-1A0A0B4J245 112 aa7.49□□□□□ -1.21
LRRC28-216ENST00000559819 NXPH4O95158 308 aa7.49□□□□□ -1.21
LRRC28-216ENST00000559819 SYNJ2BPP57105 145 aa7.49□□□□□ -1.21
LRRC28-216ENST00000559819 SUMO4Q6EEV6 95 aa7.49□□□□□ -1.21
LRRC28-216ENST00000559819 TRBV7-9A0A0J9YWB2 115 aa7.49□□□□□ -1.21
LRRC28-216ENST00000559819 K7EP34 96 aa7.49□□□□□ -1.21
LRRC28-216ENST00000559819 DUSP14O95147 198 aaKnown RBP7.49□□□□□ -1.21
LRRC28-216ENST00000559819 SMIM13P0DJ93 91 aa7.49□□□□□ -1.21
LRRC28-216ENST00000559819 PLNP26678 52 aa7.49□□□□□ -1.21
LRRC28-216ENST00000559819 MDFICQ9P1T7 246 aa7.49□□□□□ -1.21
LRRC28-216ENST00000559819 IGHV4OR15-8A0A075B7B6 117 aa7.48□□□□□ -1.21
LRRC28-216ENST00000559819 A0A087WW49 117 aa7.48□□□□□ -1.21
LRRC28-216ENST00000559819 A0A1W2PPM0 123 aa7.48□□□□□ -1.21
LRRC28-216ENST00000559819 HLA-DRB4P13762 266 aa7.48□□□□□ -1.21
LRRC28-216ENST00000559819 SLC25A16P16260 332 aa7.48□□□□□ -1.21
LRRC28-216ENST00000559819 OCIAD2Q56VL3 154 aa7.48□□□□□ -1.21
LRRC28-216ENST00000559819 NHP2Q9NX24 153 aaKnown RBP7.48□□□□□ -1.21
LRRC28-216ENST00000559819 HLA-DRB4X5D2U9 266 aa7.48□□□□□ -1.21
LRRC28-216ENST00000559819 PRSS29PA6NIE9 313 aa7.48□□□□□ -1.21
LRRC28-216ENST00000559819 F5H697 171 aa7.48□□□□□ -1.21
LRRC28-216ENST00000559819 GATA3P23771 443 aa7.48□□□□□ -1.21
LRRC28-216ENST00000559819 FBN2P35556 2912 aa7.48□□□□□ -1.21
LRRC28-216ENST00000559819 FAM74A4Q5TZK3 123 aa7.48□□□□□ -1.21
LRRC28-216ENST00000559819 CEND1Q8N111 149 aa7.48□□□□□ -1.21
LRRC28-216ENST00000559819 POM121L12Q8N7R1 296 aa7.48□□□□□ -1.21
LRRC28-216ENST00000559819 A0A0J9YX75 114 aa7.47□□□□□ -1.21
LRRC28-216ENST00000559819 EMP1P54849 157 aa7.47□□□□□ -1.21
LRRC28-216ENST00000559819 DSCR9P59020 149 aa7.47□□□□□ -1.21
LRRC28-216ENST00000559819 SPINK13Q1W4C9 94 aa7.47□□□□□ -1.21
LRRC28-216ENST00000559819 GTF2H5Q6ZYL4 71 aa7.47□□□□□ -1.21
LRRC28-216ENST00000559819 SPCS1Q9Y6A9 102 aa7.47□□□□□ -1.21
LRRC28-216ENST00000559819 MYO18BQ8IUG5 2567 aa7.47□□□□□ -1.21
LRRC28-216ENST00000559819 DOPEY2Q9Y3R5 2298 aa7.47□□□□□ -1.21
LRRC28-216ENST00000559819 TSHBP01222 138 aa7.47□□□□□ -1.21
LRRC28-216ENST00000559819 CDKN1BP46527 198 aa7.47□□□□□ -1.21
LRRC28-216ENST00000559819 HIST2H2BDQ6DRA6 164 aa7.47□□□□□ -1.21
LRRC28-216ENST00000559819 C18orf65Q6ZTR6 163 aa7.47□□□□□ -1.21
LRRC28-216ENST00000559819 BEX4Q9NWD9 120 aaPredicted RBP7.47□□□□□ -1.21
LRRC28-216ENST00000559819 ZNF580Q9UK33 172 aa7.47□□□□□ -1.21
LRRC28-216ENST00000559819 TP53TG1Q9Y2A0 90 aa7.47□□□□□ -1.21
LRRC28-216ENST00000559819 USP9YO00507 2555 aaPredicted RBP7.46□□□□□ -1.21
LRRC28-216ENST00000559819 IGHV3-16A0A0C4DH30 117 aa7.46□□□□□ -1.21
LRRC28-216ENST00000559819 K7EQG2 157 aa7.46□□□□□ -1.21
LRRC28-216ENST00000559819 SAP30O75446 220 aa7.46□□□□□ -1.21
LRRC28-216ENST00000559819 RPL39P62891 51 aaKnown RBP7.46□□□□□ -1.21
LRRC28-216ENST00000559819 SAMD5Q5TGI4 173 aa7.46□□□□□ -1.21
LRRC28-216ENST00000559819 PHLDA1Q8WV24 401 aaPredicted RBP7.46□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms