RNA–Protein interactions for RNA: ENST00000559790.1

CDC42BPB-206, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 713 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-206ENST00000559790 LELP1Q5T871 98 aa12.49□□□□□ -0.41
CDC42BPB-206ENST00000559790 CYB561D1Q8N8Q1 229 aa12.49□□□□□ -0.41
CDC42BPB-206ENST00000559790 LINC00479Q96M42 142 aa12.49□□□□□ -0.41
CDC42BPB-206ENST00000559790 PARLQ9H300 379 aa12.49□□□□□ -0.41
CDC42BPB-206ENST00000559790 EPDR1Q9UM22 224 aa12.49□□□□□ -0.41
CDC42BPB-206ENST00000559790 TAAR5O14804 337 aa12.48□□□□□ -0.41
CDC42BPB-206ENST00000559790 IGHV3-30P01768 117 aa12.48□□□□□ -0.41
CDC42BPB-206ENST00000559790 IGHV3-33P01772 117 aa12.48□□□□□ -0.41
CDC42BPB-206ENST00000559790 IGHV3-30-3P0DP02 117 aa12.48□□□□□ -0.41
CDC42BPB-206ENST00000559790 IGHV3-30-5P0DP03 117 aa12.48□□□□□ -0.41
CDC42BPB-206ENST00000559790 SUMO1P63165 101 aaKnown RBP12.48□□□□□ -0.41
CDC42BPB-206ENST00000559790 PRNTQ86SH4 94 aa12.48□□□□□ -0.41
CDC42BPB-206ENST00000559790 Q8N814 137 aa12.48□□□□□ -0.41
CDC42BPB-206ENST00000559790 NDFIP1Q9BT67 221 aa12.48□□□□□ -0.41
CDC42BPB-206ENST00000559790 Q9HAA7 133 aa12.48□□□□□ -0.41
CDC42BPB-206ENST00000559790 G3V3Q6 166 aa12.47□□□□□ -0.41
CDC42BPB-206ENST00000559790 NTN5Q8WTR8 489 aaPredicted RBP12.47□□□□□ -0.41
CDC42BPB-206ENST00000559790 TMEM70Q9BUB7 260 aa12.47□□□□□ -0.41
CDC42BPB-206ENST00000559790 JPT2Q9H910 190 aa12.47□□□□□ -0.41
CDC42BPB-206ENST00000559790 IGLV5-52A0A0A0MRZ9 124 aa12.46□□□□□ -0.41
CDC42BPB-206ENST00000559790 TRAV34A0A0B4J273 112 aa12.46□□□□□ -0.41
CDC42BPB-206ENST00000559790 CIDEAO60543 219 aa12.46□□□□□ -0.41
CDC42BPB-206ENST00000559790 SERF2P84101 59 aa12.46□□□□□ -0.41
CDC42BPB-206ENST00000559790 SMUG1Q53HV7 270 aa12.46□□□□□ -0.41
CDC42BPB-206ENST00000559790 FRZBQ92765 325 aa12.46□□□□□ -0.41
CDC42BPB-206ENST00000559790 PRADC1Q9BSG0 188 aa12.46□□□□□ -0.41
CDC42BPB-206ENST00000559790 GTSF1LQ9H1H1 148 aa12.46□□□□□ -0.41
CDC42BPB-206ENST00000559790 ARL2-SNX15V9GYD0 113 aa12.46□□□□□ -0.41
CDC42BPB-206ENST00000559790 CXorf1O96002 111 aa12.45□□□□□ -0.42
CDC42BPB-206ENST00000559790 MGST1P10620 155 aaKnown RBP12.45□□□□□ -0.42
CDC42BPB-206ENST00000559790 LAGE3Q14657 143 aa12.45□□□□□ -0.42
CDC42BPB-206ENST00000559790 OR10J3Q5JRS4 329 aa12.45□□□□□ -0.42
CDC42BPB-206ENST00000559790 RPL7L1Q6DKI1 246 aaKnown RBP12.45□□□□□ -0.42
CDC42BPB-206ENST00000559790 Q86TA4 180 aa12.45□□□□□ -0.42
CDC42BPB-206ENST00000559790 ATP6V0E2Q8NHE4 81 aa12.45□□□□□ -0.42
CDC42BPB-206ENST00000559790 SAMD10Q9BYL1 202 aa12.45□□□□□ -0.42
CDC42BPB-206ENST00000559790 TMEM167BQ9NRX6 74 aa12.45□□□□□ -0.42
CDC42BPB-206ENST00000559790 TNFSF18Q9UNG2 199 aa12.45□□□□□ -0.42
CDC42BPB-206ENST00000559790 TRAV8-6A0A0B4J262 113 aa12.44□□□□□ -0.42
CDC42BPB-206ENST00000559790 A0A1W2PRE2 83 aa12.44□□□□□ -0.42
CDC42BPB-206ENST00000559790 CRIP1P50238 77 aa12.44□□□□□ -0.42
CDC42BPB-206ENST00000559790 Q6ZSA8 131 aa12.44□□□□□ -0.42
CDC42BPB-206ENST00000559790 PIK3CD-AS1Q5SR53 167 aa12.43□□□□□ -0.42
CDC42BPB-206ENST00000559790 C14orf178Q8N769 122 aaPredicted RBP12.43□□□□□ -0.42
CDC42BPB-206ENST00000559790 K7EQM0 130 aa12.42□□□□□ -0.42
CDC42BPB-206ENST00000559790 PSCAO43653 123 aa12.42□□□□□ -0.42
CDC42BPB-206ENST00000559790 PTTG1O95997 202 aa12.42□□□□□ -0.42
CDC42BPB-206ENST00000559790 ZFP2Q6ZN57 461 aa12.42□□□□□ -0.42
CDC42BPB-206ENST00000559790 ZC2HC1AQ96GY0 325 aa12.42□□□□□ -0.42
CDC42BPB-206ENST00000559790 DNAJC30Q96LL9 226 aa12.42□□□□□ -0.42
CDC42BPB-206ENST00000559790 ACTR3CQ9C0K3 210 aaPredicted RBP12.42□□□□□ -0.42
CDC42BPB-206ENST00000559790 GAGE12JA6NER3 117 aa12.41□□□□□ -0.42
CDC42BPB-206ENST00000559790 MBP02144 154 aa12.41□□□□□ -0.42
CDC42BPB-206ENST00000559790 GIPP09681 153 aaPredicted RBP12.41□□□□□ -0.42
CDC42BPB-206ENST00000559790 GAGE1Q13065 139 aa12.41□□□□□ -0.42
CDC42BPB-206ENST00000559790 GAGE4Q13068 117 aa12.41□□□□□ -0.42
CDC42BPB-206ENST00000559790 GAGE5Q13069 117 aa12.41□□□□□ -0.42
CDC42BPB-206ENST00000559790 ZFP69Q49AA0 526 aa12.41□□□□□ -0.42
CDC42BPB-206ENST00000559790 GAGE13Q4V321 117 aa12.41□□□□□ -0.42
CDC42BPB-206ENST00000559790 DNLZQ5SXM8 178 aa12.41□□□□□ -0.42
CDC42BPB-206ENST00000559790 COX8CQ7Z4L0 72 aa12.41□□□□□ -0.42
CDC42BPB-206ENST00000559790 DAZ4Q86SG3 579 aaKnown RBP12.41□□□□□ -0.42
CDC42BPB-206ENST00000559790 DAZ3Q9NR90 486 aaKnown RBP12.41□□□□□ -0.42
CDC42BPB-206ENST00000559790 IL36BQ9NZH7 164 aa12.41□□□□□ -0.42
CDC42BPB-206ENST00000559790 FAM74A7A6NL05 159 aa12.4□□□□□ -0.42
CDC42BPB-206ENST00000559790 H3BVH4 76 aa12.4□□□□□ -0.42
CDC42BPB-206ENST00000559790 PEX7O00628 323 aa12.4□□□□□ -0.42
CDC42BPB-206ENST00000559790 UBE2G2P60604 165 aa12.4□□□□□ -0.42
CDC42BPB-206ENST00000559790 SAPCD1Q5SSQ6 148 aa12.4□□□□□ -0.42
CDC42BPB-206ENST00000559790 DMRTA1Q5VZB9 504 aa12.4□□□□□ -0.42
CDC42BPB-206ENST00000559790 MED28Q9H204 178 aa12.4□□□□□ -0.42
CDC42BPB-206ENST00000559790 CTXND1A0A1B0GTU2 59 aa12.39□□□□□ -0.43
CDC42BPB-206ENST00000559790 A8MWV9 139 aa12.39□□□□□ -0.43
CDC42BPB-206ENST00000559790 FGF8P55075 233 aaPredicted RBP12.39□□□□□ -0.43
CDC42BPB-206ENST00000559790 KRBOX1C9JBD0 128 aa12.38□□□□□ -0.43
CDC42BPB-206ENST00000559790 ASIPP42127 132 aa12.38□□□□□ -0.43
CDC42BPB-206ENST00000559790 OR2T35Q8NGX2 323 aa12.38□□□□□ -0.43
CDC42BPB-206ENST00000559790 FABP5P3A8MUU1 101 aa12.37□□□□□ -0.43
CDC42BPB-206ENST00000559790 LECT2O14960 151 aa12.37□□□□□ -0.43
CDC42BPB-206ENST00000559790 SH2D1AO60880 128 aa12.37□□□□□ -0.43
CDC42BPB-206ENST00000559790 C1QBP02746 253 aa12.37□□□□□ -0.43
CDC42BPB-206ENST00000559790 CYTL1Q9NRR1 136 aa12.37□□□□□ -0.43
CDC42BPB-206ENST00000559790 BOLA1Q9Y3E2 137 aa12.37□□□□□ -0.43
CDC42BPB-206ENST00000559790 PKHD1L1Q86WI1 4243 aa12.37□□□□□ -0.43
CDC42BPB-206ENST00000559790 FXYD6-FXYD2A0A087WZ82 144 aa12.36□□□□□ -0.43
CDC42BPB-206ENST00000559790 B4DEV8 164 aa12.36□□□□□ -0.43
CDC42BPB-206ENST00000559790 LGALSLQ3ZCW2 172 aaPredicted RBP12.36□□□□□ -0.43
CDC42BPB-206ENST00000559790 BATF3Q9NR55 127 aa12.36□□□□□ -0.43
CDC42BPB-206ENST00000559790 M0R036 132 aa12.35□□□□□ -0.43
CDC42BPB-206ENST00000559790 ARMS2P0C7Q2 107 aa12.35□□□□□ -0.43
CDC42BPB-206ENST00000559790 LRP1Q07954 4544 aaKnown RBP12.35□□□□□ -0.43
CDC42BPB-206ENST00000559790 GRIFINA4D1Z8 144 aa12.34□□□□□ -0.43
CDC42BPB-206ENST00000559790 IFNA7P01567 189 aa12.34□□□□□ -0.43
CDC42BPB-206ENST00000559790 S100A4P26447 101 aaKnown RBP12.34□□□□□ -0.43
CDC42BPB-206ENST00000559790 KRTAP10-4P60372 401 aaPredicted RBP12.34□□□□□ -0.43
CDC42BPB-206ENST00000559790 ZNF674Q2M3X9 581 aa12.34□□□□□ -0.43
CDC42BPB-206ENST00000559790 LINC01620Q4KN68 170 aa12.34□□□□□ -0.43
CDC42BPB-206ENST00000559790 NIT1Q86X76 327 aa12.34□□□□□ -0.43
CDC42BPB-206ENST00000559790 LINC01559Q495D7 138 aa12.33□□□□□ -0.44
CDC42BPB-206ENST00000559790 HIST1H2BAQ96A08 127 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms