RNA–Protein interactions for RNA: ENST00000559774.6

LRRC28-215, Transcript of leucine rich repeat containing 28, humanhuman

TSL 2

Gene LRRC28, Length 624 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-215ENST00000559774 ADIRFQ15847 76 aa6.2□□□□□ -1.42
LRRC28-215ENST00000559774 FAM222AQ5U5X8 452 aa6.2□□□□□ -1.42
LRRC28-215ENST00000559774 WDR73Q6P4I2 378 aa6.2□□□□□ -1.42
LRRC28-215ENST00000559774 WWC2-AS2Q96NR7 200 aa6.2□□□□□ -1.42
LRRC28-215ENST00000559774 RNASE7Q9H1E1 156 aaKnown RBP6.2□□□□□ -1.42
LRRC28-215ENST00000559774 NOP10Q9NPE3 64 aaKnown RBP6.2□□□□□ -1.42
LRRC28-215ENST00000559774 CARHSP1Q9Y2V2 147 aaKnown RBP6.2□□□□□ -1.42
LRRC28-215ENST00000559774 DEFB4AO15263 64 aa6.19□□□□□ -1.42
LRRC28-215ENST00000559774 MT-ND4LP03901 98 aa6.19□□□□□ -1.42
LRRC28-215ENST00000559774 ARMS2P0C7Q2 107 aa6.19□□□□□ -1.42
LRRC28-215ENST00000559774 IGLC6P0CF74 106 aa6.19□□□□□ -1.42
LRRC28-215ENST00000559774 DAD1P61803 113 aa6.19□□□□□ -1.42
LRRC28-215ENST00000559774 SYT8Q8NBV8 401 aa6.19□□□□□ -1.42
LRRC28-215ENST00000559774 OR10G8Q8NGN5 311 aa6.19□□□□□ -1.42
LRRC28-215ENST00000559774 TSKUQ8WUA8 353 aa6.19□□□□□ -1.42
LRRC28-215ENST00000559774 ANAPC16Q96DE5 110 aa6.19□□□□□ -1.42
LRRC28-215ENST00000559774 CNFNQ9BYD5 112 aa6.19□□□□□ -1.42
LRRC28-215ENST00000559774 IGHV4-4A0A075B6R2 117 aa6.18□□□□□ -1.42
LRRC28-215ENST00000559774 TRGV1A0A0A0MS02 117 aa6.18□□□□□ -1.42
LRRC28-215ENST00000559774 NXPH4O95158 308 aa6.18□□□□□ -1.42
LRRC28-215ENST00000559774 ADCYAP1P18509 176 aa6.18□□□□□ -1.42
LRRC28-215ENST00000559774 CACNG7P62955 275 aa6.18□□□□□ -1.42
LRRC28-215ENST00000559774 SLAQ13239 276 aa6.18□□□□□ -1.42
LRRC28-215ENST00000559774 C12orf74Q32Q52 190 aa6.18□□□□□ -1.42
LRRC28-215ENST00000559774 ZNF876PQ49A33 203 aa6.18□□□□□ -1.42
LRRC28-215ENST00000559774 ZFP82Q8N141 532 aa6.18□□□□□ -1.42
LRRC28-215ENST00000559774 FER1L6-AS1Q8NA97 138 aa6.18□□□□□ -1.42
LRRC28-215ENST00000559774 FAM210BQ96KR6 192 aa6.18□□□□□ -1.42
LRRC28-215ENST00000559774 CELA1Q9UNI1 258 aa6.18□□□□□ -1.42
LRRC28-215ENST00000559774 PHLDA3Q9Y5J5 127 aa6.18□□□□□ -1.42
LRRC28-215ENST00000559774 V9GYV3 84 aa6.18□□□□□ -1.42
LRRC28-215ENST00000559774 TGP01266 2768 aa6.18□□□□□ -1.42
LRRC28-215ENST00000559774 TRGV2A0A075B6R0 118 aa6.17□□□□□ -1.42
LRRC28-215ENST00000559774 TMSB15BA0A087X1C1 80 aa6.17□□□□□ -1.42
LRRC28-215ENST00000559774 TRAV10A0A0B4J240 114 aa6.17□□□□□ -1.42
LRRC28-215ENST00000559774 GRIFINA4D1Z8 144 aa6.17□□□□□ -1.42
LRRC28-215ENST00000559774 A8MWV9 139 aa6.17□□□□□ -1.42
LRRC28-215ENST00000559774 H3BVH4 76 aa6.17□□□□□ -1.42
LRRC28-215ENST00000559774 ATP5G1P05496 136 aa6.17□□□□□ -1.42
LRRC28-215ENST00000559774 CTRLP40313 264 aa6.17□□□□□ -1.42
LRRC28-215ENST00000559774 RPL19P84098 196 aaKnown RBP6.17□□□□□ -1.42
LRRC28-215ENST00000559774 Q6ZTI0 123 aa6.17□□□□□ -1.42
LRRC28-215ENST00000559774 CTDSP1Q9GZU7 261 aa6.17□□□□□ -1.42
LRRC28-215ENST00000559774 TMEM242Q9NWH2 141 aa6.17□□□□□ -1.42
LRRC28-215ENST00000559774 TRAV4A0A0B4J268 109 aa6.16□□□□□ -1.42
LRRC28-215ENST00000559774 SMIM27A0A1W2PRY6 76 aa6.16□□□□□ -1.42
LRRC28-215ENST00000559774 DEFB130BP0DP73 79 aa6.16□□□□□ -1.42
LRRC28-215ENST00000559774 DEFB130AP0DP74 79 aa6.16□□□□□ -1.42
LRRC28-215ENST00000559774 TCTAP57738 103 aa6.16□□□□□ -1.42
LRRC28-215ENST00000559774 RHEBQ15382 184 aa6.16□□□□□ -1.42
LRRC28-215ENST00000559774 SPANXN1Q5VSR9 72 aa6.16□□□□□ -1.42
LRRC28-215ENST00000559774 ZFP2Q6ZN57 461 aa6.16□□□□□ -1.42
LRRC28-215ENST00000559774 SVBPQ8N300 66 aa6.16□□□□□ -1.42
LRRC28-215ENST00000559774 MUC7Q8TAX7 377 aa6.16□□□□□ -1.42
LRRC28-215ENST00000559774 IMMP2LQ96T52 175 aa6.16□□□□□ -1.42
LRRC28-215ENST00000559774 NAT8BQ9UHF3 227 aa6.16□□□□□ -1.42
LRRC28-215ENST00000559774 A0A087WWC5 75 aa6.15□□□□□ -1.42
LRRC28-215ENST00000559774 A0A1B0GW15 77 aa6.15□□□□□ -1.42
LRRC28-215ENST00000559774 GAGE12BA1L429 117 aa6.15□□□□□ -1.42
LRRC28-215ENST00000559774 NUPR2A6NF83 97 aa6.15□□□□□ -1.42
LRRC28-215ENST00000559774 HIGD1CA8MV81 97 aa6.15□□□□□ -1.42
LRRC28-215ENST00000559774 H3BNG1 76 aa6.15□□□□□ -1.42
LRRC28-215ENST00000559774 C3orf84H3BNL1 204 aa6.15□□□□□ -1.42
LRRC28-215ENST00000559774 RHODO00212 210 aa6.15□□□□□ -1.42
LRRC28-215ENST00000559774 RS1O15537 224 aa6.15□□□□□ -1.42
LRRC28-215ENST00000559774 GAGE7O76087 117 aa6.15□□□□□ -1.42
LRRC28-215ENST00000559774 SNAPINO95295 136 aa6.15□□□□□ -1.42
LRRC28-215ENST00000559774 GAGE12FP0CL80 117 aa6.15□□□□□ -1.42
LRRC28-215ENST00000559774 GAGE12GP0CL81 117 aa6.15□□□□□ -1.42
LRRC28-215ENST00000559774 GAGE12IP0CL82 117 aa6.15□□□□□ -1.42
LRRC28-215ENST00000559774 NANOS2P60321 138 aaKnown RBP6.15□□□□□ -1.42
LRRC28-215ENST00000559774 RNF212Q495C1 297 aa6.15□□□□□ -1.42
LRRC28-215ENST00000559774 LYZL1Q6UWQ5 148 aa6.15□□□□□ -1.42
LRRC28-215ENST00000559774 Q6ZTC4 211 aa6.15□□□□□ -1.42
LRRC28-215ENST00000559774 OR4C5Q8NGB2 326 aa6.15□□□□□ -1.42
LRRC28-215ENST00000559774 GTSF1Q8WW33 167 aa6.15□□□□□ -1.42
LRRC28-215ENST00000559774 BORCS7Q96B45 105 aa6.15□□□□□ -1.42
LRRC28-215ENST00000559774 MRPL16Q9NX20 251 aaKnown RBP6.15□□□□□ -1.42
LRRC28-215ENST00000559774 DEFB131BA0A096LNP1 70 aa6.14□□□□□ -1.43
LRRC28-215ENST00000559774 A0A1B0GUT8 65 aa6.14□□□□□ -1.43
LRRC28-215ENST00000559774 TRGC1P0CF51 173 aa6.14□□□□□ -1.43
LRRC28-215ENST00000559774 GZMBP10144 247 aa6.14□□□□□ -1.43
LRRC28-215ENST00000559774 CFAP126Q5VTH2 177 aa6.14□□□□□ -1.43
LRRC28-215ENST00000559774 CEMP1Q6PRD7 247 aaPredicted RBP6.14□□□□□ -1.43
LRRC28-215ENST00000559774 SLC7A5P1Q8MH63 180 aa6.14□□□□□ -1.43
LRRC28-215ENST00000559774 CLRN3Q8NCR9 226 aa6.14□□□□□ -1.43
LRRC28-215ENST00000559774 OR10AG1Q8NH19 301 aa6.14□□□□□ -1.43
LRRC28-215ENST00000559774 PHLDA1Q8WV24 401 aaPredicted RBP6.14□□□□□ -1.43
LRRC28-215ENST00000559774 FRZBQ92765 325 aa6.14□□□□□ -1.43
LRRC28-215ENST00000559774 AP1S3Q96PC3 154 aa6.14□□□□□ -1.43
LRRC28-215ENST00000559774 KLK5Q9Y337 293 aaPredicted RBP6.14□□□□□ -1.43
LRRC28-215ENST00000559774 TRAV9-1A0A075B6T8 112 aa6.13□□□□□ -1.43
LRRC28-215ENST00000559774 M0R381 172 aa6.13□□□□□ -1.43
LRRC28-215ENST00000559774 APOC3P02656 99 aa6.13□□□□□ -1.43
LRRC28-215ENST00000559774 NTF3P20783 257 aa6.13□□□□□ -1.43
LRRC28-215ENST00000559774 UFSP1Q6NVU6 142 aa6.13□□□□□ -1.43
LRRC28-215ENST00000559774 SMIM15Q7Z3B0 74 aa6.13□□□□□ -1.43
LRRC28-215ENST00000559774 ATP5L2Q7Z4Y8 100 aa6.13□□□□□ -1.43
LRRC28-215ENST00000559774 POM121L12Q8N7R1 296 aa6.13□□□□□ -1.43
LRRC28-215ENST00000559774 NUP35Q8NFH5 326 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms