RNA–Protein interactions for RNA: ENST00000559771.5

USP3-215, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-215ENST00000559771 PACRGQ96M98 296 aaPredicted RBP4.05□□□□□ -1.76
USP3-215ENST00000559771 KRTAP1-5Q9BYS1 174 aa4.05□□□□□ -1.76
USP3-215ENST00000559771 OSTCQ9NRP0 149 aa4.05□□□□□ -1.76
USP3-215ENST00000559771 NBDYA0A0U1RRE5 68 aa4.04□□□□□ -1.76
USP3-215ENST00000559771 TEX48A0A1B0GUV7 120 aa4.04□□□□□ -1.76
USP3-215ENST00000559771 M0R2Z0 102 aa4.04□□□□□ -1.76
USP3-215ENST00000559771 COX7A2P2O60397 106 aa4.04□□□□□ -1.76
USP3-215ENST00000559771 CDK2AP2O75956 126 aa4.04□□□□□ -1.76
USP3-215ENST00000559771 MT-ND6P03923 174 aa4.04□□□□□ -1.76
USP3-215ENST00000559771 TRGC1P0CF51 173 aa4.04□□□□□ -1.76
USP3-215ENST00000559771 PRB4P10163 310 aaPredicted RBP4.04□□□□□ -1.76
USP3-215ENST00000559771 S100A7P31151 101 aa4.04□□□□□ -1.76
USP3-215ENST00000559771 ATP5G3P48201 142 aa4.04□□□□□ -1.76
USP3-215ENST00000559771 GNG4P50150 75 aa4.04□□□□□ -1.76
USP3-215ENST00000559771 CNN1P51911 297 aaKnown RBP4.04□□□□□ -1.76
USP3-215ENST00000559771 UBE2G2P60604 165 aa4.04□□□□□ -1.76
USP3-215ENST00000559771 DAD1P61803 113 aa4.04□□□□□ -1.76
USP3-215ENST00000559771 SPINK13Q1W4C9 94 aa4.04□□□□□ -1.76
USP3-215ENST00000559771 RRN3P1Q2M238 152 aa4.04□□□□□ -1.76
USP3-215ENST00000559771 C10orf113Q5VZT2 155 aa4.04□□□□□ -1.76
USP3-215ENST00000559771 EBLN2Q6P2I7 272 aa4.04□□□□□ -1.76
USP3-215ENST00000559771 WDR73Q6P4I2 378 aa4.04□□□□□ -1.76
USP3-215ENST00000559771 OR8I2Q8N0Y5 310 aa4.04□□□□□ -1.76
USP3-215ENST00000559771 HIST3H2BBQ8N257 126 aa4.04□□□□□ -1.76
USP3-215ENST00000559771 RNF182Q8N6D2 247 aa4.04□□□□□ -1.76
USP3-215ENST00000559771 FRZBQ92765 325 aa4.04□□□□□ -1.76
USP3-215ENST00000559771 IL36BQ9NZH7 164 aa4.04□□□□□ -1.76
USP3-215ENST00000559771 GOLT1BQ9Y3E0 138 aa4.04□□□□□ -1.76
USP3-215ENST00000559771 LINC00588Q9Y4M8 146 aa4.04□□□□□ -1.76
USP3-215ENST00000559771 HERC1Q15751 4861 aa4.03□□□□□ -1.76
USP3-215ENST00000559771 TRAV12-2A0A075B6T6 113 aa4.03□□□□□ -1.76
USP3-215ENST00000559771 A0A1W2PPQ1 181 aa4.03□□□□□ -1.76
USP3-215ENST00000559771 H3BRN7 92 aa4.03□□□□□ -1.76
USP3-215ENST00000559771 MRPS12O15235 138 aaKnown RBP4.03□□□□□ -1.76
USP3-215ENST00000559771 OR7C2O60412 319 aa4.03□□□□□ -1.76
USP3-215ENST00000559771 GCGP01275 180 aa4.03□□□□□ -1.76
USP3-215ENST00000559771 TSPOP30536 169 aa4.03□□□□□ -1.76
USP3-215ENST00000559771 PATE2Q6UY27 113 aa4.03□□□□□ -1.76
USP3-215ENST00000559771 FAM231DQ6ZW35 169 aa4.03□□□□□ -1.76
USP3-215ENST00000559771 MIR17HGQ75NE6 70 aa4.03□□□□□ -1.76
USP3-215ENST00000559771 ARL6IP6Q8N6S5 226 aa4.03□□□□□ -1.76
USP3-215ENST00000559771 OCC1Q8TAD7 63 aa4.03□□□□□ -1.76
USP3-215ENST00000559771 TMEM37Q8WXS4 190 aa4.03□□□□□ -1.76
USP3-215ENST00000559771 TMEM18Q96B42 140 aa4.03□□□□□ -1.76
USP3-215ENST00000559771 FAM167A-AS1Q96KT0 104 aa4.03□□□□□ -1.76
USP3-215ENST00000559771 PAXXQ9BUH6 204 aa4.03□□□□□ -1.76
USP3-215ENST00000559771 GNB1LQ9BYB4 327 aa4.03□□□□□ -1.76
USP3-215ENST00000559771 NIT2Q9NQR4 276 aa4.03□□□□□ -1.76
USP3-215ENST00000559771 TMEM14CQ9P0S9 112 aa4.03□□□□□ -1.76
USP3-215ENST00000559771 TRBV20OR9-2A0A075B6H5 130 aa4.02□□□□□ -1.77
USP3-215ENST00000559771 XKRY2A2RUG3 117 aa4.02□□□□□ -1.77
USP3-215ENST00000559771 LYRM9A8MSI8 78 aa4.02□□□□□ -1.77
USP3-215ENST00000559771 C16orf90A8MZG2 172 aa4.02□□□□□ -1.77
USP3-215ENST00000559771 HYPMO75409 117 aa4.02□□□□□ -1.77
USP3-215ENST00000559771 INSP01308 110 aa4.02□□□□□ -1.77
USP3-215ENST00000559771 DEFB130BP0DP73 79 aa4.02□□□□□ -1.77
USP3-215ENST00000559771 DEFB130AP0DP74 79 aa4.02□□□□□ -1.77
USP3-215ENST00000559771 ORM2P19652 201 aa4.02□□□□□ -1.77
USP3-215ENST00000559771 ERVFC1-1P60608 527 aa4.02□□□□□ -1.77
USP3-215ENST00000559771 UBE2L3P68036 154 aaKnown RBP4.02□□□□□ -1.77
USP3-215ENST00000559771 LYPD1Q8N2G4 141 aa4.02□□□□□ -1.77
USP3-215ENST00000559771 C6orf223Q8N319 242 aa4.02□□□□□ -1.77
USP3-215ENST00000559771 LINC00612Q8N6U2 182 aa4.02□□□□□ -1.77
USP3-215ENST00000559771 MAPKAPK5-AS1Q8N8E1 139 aa4.02□□□□□ -1.77
USP3-215ENST00000559771 C15orf53Q8NAA6 179 aa4.02□□□□□ -1.77
USP3-215ENST00000559771 OR1B1Q8NGR6 318 aa4.02□□□□□ -1.77
USP3-215ENST00000559771 SHANK2-AS3Q9BTD1 123 aa4.02□□□□□ -1.77
USP3-215ENST00000559771 DERL1Q9BUN8 251 aa4.02□□□□□ -1.77
USP3-215ENST00000559771 SLC25A2Q9BXI2 301 aa4.02□□□□□ -1.77
USP3-215ENST00000559771 SLC25A39Q9BZJ4 359 aaPredicted RBP4.02□□□□□ -1.77
USP3-215ENST00000559771 GSN-AS1Q9NRJ2 163 aa4.02□□□□□ -1.77
USP3-215ENST00000559771 KLF12Q9Y4X4 402 aa4.02□□□□□ -1.77
USP3-215ENST00000559771 TRAPPC1Q9Y5R8 145 aa4.02□□□□□ -1.77
USP3-215ENST00000559771 A0A087X0K7 114 aa4.01□□□□□ -1.77
USP3-215ENST00000559771 TRBV6-1A0A0K0K1D8 114 aa4.01□□□□□ -1.77
USP3-215ENST00000559771 SMIM27A0A1W2PRY6 76 aa4.01□□□□□ -1.77
USP3-215ENST00000559771 FAM231BA6NCW3 169 aa4.01□□□□□ -1.77
USP3-215ENST00000559771 FBLL1A6NHQ2 334 aaKnown RBP4.01□□□□□ -1.77
USP3-215ENST00000559771 CBY3A6NI87 242 aa4.01□□□□□ -1.77
USP3-215ENST00000559771 IFITM10A6NMD0 228 aa4.01□□□□□ -1.77
USP3-215ENST00000559771 GGTLC3B5MD39 225 aa4.01□□□□□ -1.77
USP3-215ENST00000559771 F5H768 121 aa4.01□□□□□ -1.77
USP3-215ENST00000559771 DUSP14O95147 198 aaKnown RBP4.01□□□□□ -1.77
USP3-215ENST00000559771 NUDT3O95989 172 aa4.01□□□□□ -1.77
USP3-215ENST00000559771 HIST1H1EP10412 219 aaKnown RBP4.01□□□□□ -1.77
USP3-215ENST00000559771 ESDP10768 282 aa4.01□□□□□ -1.77
USP3-215ENST00000559771 RANP62826 216 aaKnown RBP4.01□□□□□ -1.77
USP3-215ENST00000559771 CTAG1AP78358 180 aa4.01□□□□□ -1.77
USP3-215ENST00000559771 Q0VG73 95 aa4.01□□□□□ -1.77
USP3-215ENST00000559771 JOSD1Q15040 202 aaPredicted RBP4.01□□□□□ -1.77
USP3-215ENST00000559771 TMEM183BQ1AE95 376 aa4.01□□□□□ -1.77
USP3-215ENST00000559771 CENPWQ5EE01 88 aa4.01□□□□□ -1.77
USP3-215ENST00000559771 SAMD13Q5VXD3 122 aa4.01□□□□□ -1.77
USP3-215ENST00000559771 LINC00305Q7Z4B0 112 aa4.01□□□□□ -1.77
USP3-215ENST00000559771 ATP5L2Q7Z4Y8 100 aa4.01□□□□□ -1.77
USP3-215ENST00000559771 C5orf17Q8NAS9 161 aa4.01□□□□□ -1.77
USP3-215ENST00000559771 NUDT10Q8NFP7 164 aa4.01□□□□□ -1.77
USP3-215ENST00000559771 OR8A1Q8NGG7 326 aa4.01□□□□□ -1.77
USP3-215ENST00000559771 OR10D4PQ8NGN7 298 aa4.01□□□□□ -1.77
USP3-215ENST00000559771 RNASE8Q8TDE3 154 aaKnown RBP4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms