RNA–Protein interactions for RNA: ENST00000559658.5

CHRNA3-206, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 2

Gene CHRNA3, Length 1,889 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-206ENST00000559658 MRPL18Q9H0U6 180 aaKnown RBP12.55□□□□□ -0.4
CHRNA3-206ENST00000559658 TRAPPC1Q9Y5R8 145 aa12.55□□□□□ -0.4
CHRNA3-206ENST00000559658 LOC102724200A0A096LPH7 203 aaPredicted RBP12.55□□□□□ -0.4
CHRNA3-206ENST00000559658 KIAA1644Q3SXP7 199 aa12.55□□□□□ -0.4
CHRNA3-206ENST00000559658 C11orf72Q8NBR9 251 aa12.55□□□□□ -0.4
CHRNA3-206ENST00000559658 DMRTA1Q5VZB9 504 aa12.54□□□□□ -0.4
CHRNA3-206ENST00000559658 C20orf144Q9BQM9 153 aa12.54□□□□□ -0.4
CHRNA3-206ENST00000559658 GNB1LQ9BYB4 327 aa12.54□□□□□ -0.4
CHRNA3-206ENST00000559658 GSN-AS1Q9NRJ2 163 aa12.54□□□□□ -0.4
CHRNA3-206ENST00000559658 F2Z2F3 143 aa12.53□□□□□ -0.4
CHRNA3-206ENST00000559658 RIGQ13278 110 aa12.53□□□□□ -0.4
CHRNA3-206ENST00000559658 DEFB135Q30KP9 77 aa12.53□□□□□ -0.4
CHRNA3-206ENST00000559658 SPANXN1Q5VSR9 72 aa12.53□□□□□ -0.4
CHRNA3-206ENST00000559658 ZNF705AQ6ZN79 300 aaPredicted RBP12.53□□□□□ -0.4
CHRNA3-206ENST00000559658 BORCS7Q96B45 105 aa12.53□□□□□ -0.4
CHRNA3-206ENST00000559658 JPT2Q9H910 190 aa12.53□□□□□ -0.4
CHRNA3-206ENST00000559658 PHLDA3Q9Y5J5 127 aa12.53□□□□□ -0.4
CHRNA3-206ENST00000559658 TRGV11A0A075B6L2 103 aa12.52□□□□□ -0.41
CHRNA3-206ENST00000559658 MED14OSP0DP75 135 aa12.52□□□□□ -0.41
CHRNA3-206ENST00000559658 EVI2AP22794 236 aa12.51□□□□□ -0.41
CHRNA3-206ENST00000559658 RASL11AQ6T310 242 aa12.51□□□□□ -0.41
CHRNA3-206ENST00000559658 AMN1Q8IY45 258 aa12.51□□□□□ -0.41
CHRNA3-206ENST00000559658 TMEM256Q8N2U0 113 aa12.51□□□□□ -0.41
CHRNA3-206ENST00000559658 RNASE8Q8TDE3 154 aaKnown RBP12.51□□□□□ -0.41
CHRNA3-206ENST00000559658 LINC00467Q9BRT7 94 aa12.51□□□□□ -0.41
CHRNA3-206ENST00000559658 C1QTNF4Q9BXJ3 329 aa12.51□□□□□ -0.41
CHRNA3-206ENST00000559658 IGHV4-4A0A075B6R2 117 aa12.51□□□□□ -0.41
CHRNA3-206ENST00000559658 NXPH4O95158 308 aa12.51□□□□□ -0.41
CHRNA3-206ENST00000559658 TRGC1P0CF51 173 aa12.51□□□□□ -0.41
CHRNA3-206ENST00000559658 WDR73Q6P4I2 378 aa12.51□□□□□ -0.41
CHRNA3-206ENST00000559658 GOLT1BQ9Y3E0 138 aa12.51□□□□□ -0.41
CHRNA3-206ENST00000559658 PLAC8L1A1L4L8 177 aa12.5□□□□□ -0.41
CHRNA3-206ENST00000559658 C1orf196B1AJZ1 125 aa12.5□□□□□ -0.41
CHRNA3-206ENST00000559658 HIST1H2BKO60814 126 aa12.5□□□□□ -0.41
CHRNA3-206ENST00000559658 HLA-DQA1P01909 254 aa12.5□□□□□ -0.41
CHRNA3-206ENST00000559658 HIST1H2BJP06899 126 aa12.5□□□□□ -0.41
CHRNA3-206ENST00000559658 HIST1H2BOP23527 126 aa12.5□□□□□ -0.41
CHRNA3-206ENST00000559658 HIST1H2BBP33778 126 aa12.5□□□□□ -0.41
CHRNA3-206ENST00000559658 HIST1H2BDP58876 126 aa12.5□□□□□ -0.41
CHRNA3-206ENST00000559658 HIST1H2BCP62807 126 aa12.5□□□□□ -0.41
CHRNA3-206ENST00000559658 HIST2H2BEQ16778 126 aa12.5□□□□□ -0.41
CHRNA3-206ENST00000559658 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.5□□□□□ -0.41
CHRNA3-206ENST00000559658 GATD1Q8NB37 220 aa12.5□□□□□ -0.41
CHRNA3-206ENST00000559658 HIST1H2BHQ93079 126 aa12.5□□□□□ -0.41
CHRNA3-206ENST00000559658 HIST1H2BNQ99877 126 aa12.5□□□□□ -0.41
CHRNA3-206ENST00000559658 HIST1H2BMQ99879 126 aa12.5□□□□□ -0.41
CHRNA3-206ENST00000559658 GAS8-AS1O95177 125 aa12.49□□□□□ -0.41
CHRNA3-206ENST00000559658 ZNF493Q6ZR52 646 aa12.49□□□□□ -0.41
CHRNA3-206ENST00000559658 APCSP02743 223 aa12.48□□□□□ -0.41
CHRNA3-206ENST00000559658 IL17DQ8TAD2 202 aa12.48□□□□□ -0.41
CHRNA3-206ENST00000559658 X6R8D5 127 aa12.48□□□□□ -0.41
CHRNA3-206ENST00000559658 NACAE9PAV3 2078 aa12.48□□□□□ -0.41
CHRNA3-206ENST00000559658 KIR2DL5BA0A0G2JN68 375 aa12.48□□□□□ -0.41
CHRNA3-206ENST00000559658 KIR2DL5BA0A0G2JPC4 375 aa12.48□□□□□ -0.41
CHRNA3-206ENST00000559658 MT-ND6P03923 174 aa12.48□□□□□ -0.41
CHRNA3-206ENST00000559658 CACNG7P62955 275 aa12.48□□□□□ -0.41
CHRNA3-206ENST00000559658 ZNF415Q09FC8 603 aa12.48□□□□□ -0.41
CHRNA3-206ENST00000559658 KIR2DL5AQ8N109 375 aa12.48□□□□□ -0.41
CHRNA3-206ENST00000559658 KIR2DL5BQ8NHK3 375 aa12.48□□□□□ -0.41
CHRNA3-206ENST00000559658 RNF185Q96GF1 192 aa12.48□□□□□ -0.41
CHRNA3-206ENST00000559658 MRPL16Q9NX20 251 aaKnown RBP12.48□□□□□ -0.41
CHRNA3-206ENST00000559658 TENM3Q9P273 2699 aa12.48□□□□□ -0.41
CHRNA3-206ENST00000559658 APOC4P55056 127 aa12.47□□□□□ -0.41
CHRNA3-206ENST00000559658 C14orf178Q8N769 122 aaPredicted RBP12.47□□□□□ -0.41
CHRNA3-206ENST00000559658 RCHY1Q96PM5 261 aa12.47□□□□□ -0.41
CHRNA3-206ENST00000559658 SAMD10Q9BYL1 202 aa12.47□□□□□ -0.41
CHRNA3-206ENST00000559658 A0A1B0GW15 77 aa12.46□□□□□ -0.41
CHRNA3-206ENST00000559658 SMKR1H3BMG3 65 aa12.46□□□□□ -0.41
CHRNA3-206ENST00000559658 KPRPQ5T749 579 aaPredicted RBP12.46□□□□□ -0.41
CHRNA3-206ENST00000559658 TMEM263Q8WUH6 116 aaKnown RBP12.46□□□□□ -0.41
CHRNA3-206ENST00000559658 TMEM191AQ9H0A3 160 aa12.46□□□□□ -0.41
CHRNA3-206ENST00000559658 RETNQ9HD89 108 aa12.46□□□□□ -0.41
CHRNA3-206ENST00000559658 A0A087WWL8 130 aa12.46□□□□□ -0.42
CHRNA3-206ENST00000559658 TRAV26-2A0A0B4J265 109 aa12.46□□□□□ -0.42
CHRNA3-206ENST00000559658 K7EIL1 84 aa12.46□□□□□ -0.42
CHRNA3-206ENST00000559658 NCR2O95944 276 aa12.46□□□□□ -0.42
CHRNA3-206ENST00000559658 SRIP30626 198 aa12.46□□□□□ -0.42
CHRNA3-206ENST00000559658 ZNF876PQ49A33 203 aa12.46□□□□□ -0.42
CHRNA3-206ENST00000559658 COX19Q49B96 90 aa12.46□□□□□ -0.42
CHRNA3-206ENST00000559658 FAM104BQ5XKR9 115 aa12.46□□□□□ -0.42
CHRNA3-206ENST00000559658 RAB5BP61020 215 aa12.45□□□□□ -0.42
CHRNA3-206ENST00000559658 MRPL51Q4U2R6 128 aaKnown RBP12.45□□□□□ -0.42
CHRNA3-206ENST00000559658 RRN3P1Q2M238 152 aa12.44□□□□□ -0.42
CHRNA3-206ENST00000559658 KIF25-AS1Q9Y6Z4 181 aa12.44□□□□□ -0.42
CHRNA3-206ENST00000559658 A8MZ25 164 aa12.44□□□□□ -0.42
CHRNA3-206ENST00000559658 DEFB4AO15263 64 aa12.44□□□□□ -0.42
CHRNA3-206ENST00000559658 S100A8P05109 93 aa12.44□□□□□ -0.42
CHRNA3-206ENST00000559658 GATA1P15976 413 aaPredicted RBP12.44□□□□□ -0.42
CHRNA3-206ENST00000559658 RAB4AP20338 218 aa12.44□□□□□ -0.42
CHRNA3-206ENST00000559658 EMP1P54849 157 aa12.44□□□□□ -0.42
CHRNA3-206ENST00000559658 D6R8Y8 96 aa12.43□□□□□ -0.42
CHRNA3-206ENST00000559658 M0R2P5 195 aa12.43□□□□□ -0.42
CHRNA3-206ENST00000559658 LINC00315P59091 139 aa12.43□□□□□ -0.42
CHRNA3-206ENST00000559658 IQCJQ1A5X6 159 aa12.43□□□□□ -0.42
CHRNA3-206ENST00000559658 FAM74A4Q5TZK3 123 aa12.43□□□□□ -0.42
CHRNA3-206ENST00000559658 Q6ZTI0 123 aa12.43□□□□□ -0.42
CHRNA3-206ENST00000559658 AP1S3Q96PC3 154 aa12.43□□□□□ -0.42
CHRNA3-206ENST00000559658 NOP10Q9NPE3 64 aaKnown RBP12.43□□□□□ -0.42
CHRNA3-206ENST00000559658 OR11H2Q8NH07 326 aa12.42□□□□□ -0.42
CHRNA3-206ENST00000559658 C16orf74Q96GX8 76 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms