RNA–Protein interactions for RNA: ENST00000559339.1

SNX1-205, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 101 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-205ENST00000559339 SULT1A2P50226 295 aa3.04□□□□□ -1.92
SNX1-205ENST00000559339 ZNF80P51504 273 aaPredicted RBP3.04□□□□□ -1.92
SNX1-205ENST00000559339 FHL2Q14192 279 aa3.04□□□□□ -1.92
SNX1-205ENST00000559339 PIK3CD-AS1Q5SR53 167 aa3.04□□□□□ -1.92
SNX1-205ENST00000559339 COX8CQ7Z4L0 72 aa3.04□□□□□ -1.92
SNX1-205ENST00000559339 BAGE2Q86Y30 109 aa3.04□□□□□ -1.92
SNX1-205ENST00000559339 NHLRC2Q8NBF2 726 aa3.04□□□□□ -1.92
SNX1-205ENST00000559339 ZNRF2Q8NHG8 242 aa3.04□□□□□ -1.92
SNX1-205ENST00000559339 VSIG2Q96IQ7 327 aa3.04□□□□□ -1.92
SNX1-205ENST00000559339 ZNF479Q96JC4 524 aa3.04□□□□□ -1.92
SNX1-205ENST00000559339 UPK3BQ9BT76 320 aa3.04□□□□□ -1.92
SNX1-205ENST00000559339 SSBP4Q9BWG4 385 aaPredicted RBP3.04□□□□□ -1.92
SNX1-205ENST00000559339 PHLDA3Q9Y5J5 127 aa3.04□□□□□ -1.92
SNX1-205ENST00000559339 IGKV3D-20A0A0C4DH25 116 aa3.03□□□□□ -1.92
SNX1-205ENST00000559339 TRBV6-4A0A1B0GX49 114 aa3.03□□□□□ -1.92
SNX1-205ENST00000559339 SCO2A0A1W2PP80 73 aa3.03□□□□□ -1.92
SNX1-205ENST00000559339 XKRY2A2RUG3 117 aa3.03□□□□□ -1.92
SNX1-205ENST00000559339 PRSS29PA6NIE9 313 aa3.03□□□□□ -1.92
SNX1-205ENST00000559339 K7EQD1 137 aa3.03□□□□□ -1.92
SNX1-205ENST00000559339 M0R036 132 aa3.03□□□□□ -1.92
SNX1-205ENST00000559339 RHODO00212 210 aa3.03□□□□□ -1.92
SNX1-205ENST00000559339 SH2D1AO60880 128 aa3.03□□□□□ -1.92
SNX1-205ENST00000559339 RNASE3P12724 160 aaKnown RBP3.03□□□□□ -1.92
SNX1-205ENST00000559339 GYPEP15421 78 aa3.03□□□□□ -1.92
SNX1-205ENST00000559339 BTF3P20290 206 aaKnown RBP3.03□□□□□ -1.92
SNX1-205ENST00000559339 RPL35P42766 123 aaKnown RBP3.03□□□□□ -1.92
SNX1-205ENST00000559339 RHOHQ15669 191 aa3.03□□□□□ -1.92
SNX1-205ENST00000559339 ESRGQ1W209 222 aa3.03□□□□□ -1.92
SNX1-205ENST00000559339 ZNF674Q2M3X9 581 aa3.03□□□□□ -1.92
SNX1-205ENST00000559339 ZNF506Q5JVG8 444 aa3.03□□□□□ -1.92
SNX1-205ENST00000559339 CFAP126Q5VTH2 177 aa3.03□□□□□ -1.92
SNX1-205ENST00000559339 PRR27Q6MZM9 219 aa3.03□□□□□ -1.92
SNX1-205ENST00000559339 ZFP2Q6ZN57 461 aa3.03□□□□□ -1.92
SNX1-205ENST00000559339 Q6ZR54 194 aa3.03□□□□□ -1.92
SNX1-205ENST00000559339 C6orf223Q8N319 242 aa3.03□□□□□ -1.92
SNX1-205ENST00000559339 PTH2Q96A98 100 aa3.03□□□□□ -1.92
SNX1-205ENST00000559339 DAZAP1Q96EP5 407 aaKnown RBP3.03□□□□□ -1.92
SNX1-205ENST00000559339 SMIM12Q96EX1 92 aa3.03□□□□□ -1.92
SNX1-205ENST00000559339 ZC2HC1AQ96GY0 325 aa3.03□□□□□ -1.92
SNX1-205ENST00000559339 C9orf85Q96MD7 179 aa3.03□□□□□ -1.92
SNX1-205ENST00000559339 BIN3Q9NQY0 253 aa3.03□□□□□ -1.92
SNX1-205ENST00000559339 IL36BQ9NZH7 164 aa3.03□□□□□ -1.92
SNX1-205ENST00000559339 C11orf21Q9P2W6 132 aa3.03□□□□□ -1.92
SNX1-205ENST00000559339 VAX2Q9UIW0 290 aa3.03□□□□□ -1.92
SNX1-205ENST00000559339 MRPS16Q9Y3D3 137 aaKnown RBP3.03□□□□□ -1.92
SNX1-205ENST00000559339 LY96Q9Y6Y9 160 aa3.03□□□□□ -1.92
SNX1-205ENST00000559339 KMT2AQ03164 3969 aa3.03□□□□□ -1.92
SNX1-205ENST00000559339 IGHV3-73A0A0B4J1V6 119 aa3.02□□□□□ -1.93
SNX1-205ENST00000559339 TRAV8-6A0A0B4J262 113 aa3.02□□□□□ -1.93
SNX1-205ENST00000559339 PGPEP1LA6NFU8 196 aa3.02□□□□□ -1.93
SNX1-205ENST00000559339 KRBOX1C9JBD0 128 aa3.02□□□□□ -1.93
SNX1-205ENST00000559339 H3BVH4 76 aa3.02□□□□□ -1.93
SNX1-205ENST00000559339 M0R381 172 aa3.02□□□□□ -1.93
SNX1-205ENST00000559339 SIVA1O15304 175 aa3.02□□□□□ -1.93
SNX1-205ENST00000559339 RS1O15537 224 aa3.02□□□□□ -1.93
SNX1-205ENST00000559339 ARMS2P0C7Q2 107 aa3.02□□□□□ -1.93
SNX1-205ENST00000559339 BCL2P10415 239 aa3.02□□□□□ -1.93
SNX1-205ENST00000559339 GATA1P15976 413 aaPredicted RBP3.02□□□□□ -1.93
SNX1-205ENST00000559339 EVI2AP22794 236 aa3.02□□□□□ -1.93
SNX1-205ENST00000559339 GNG4P50150 75 aa3.02□□□□□ -1.93
SNX1-205ENST00000559339 CRIP1P50238 77 aa3.02□□□□□ -1.93
SNX1-205ENST00000559339 BLOC1S1P78537 153 aa3.02□□□□□ -1.93
SNX1-205ENST00000559339 CCL20P78556 96 aa3.02□□□□□ -1.93
SNX1-205ENST00000559339 MEF2BQ02080 365 aaPredicted RBP3.02□□□□□ -1.93
SNX1-205ENST00000559339 DNLZQ5SXM8 178 aa3.02□□□□□ -1.93
SNX1-205ENST00000559339 FAM74A4Q5TZK3 123 aa3.02□□□□□ -1.93
SNX1-205ENST00000559339 LYPD5Q6UWN5 251 aa3.02□□□□□ -1.93
SNX1-205ENST00000559339 ALKAL2Q6UX46 152 aa3.02□□□□□ -1.93
SNX1-205ENST00000559339 ZFP82Q8N141 532 aa3.02□□□□□ -1.93
SNX1-205ENST00000559339 C9orf62Q8N4C0 152 aa3.02□□□□□ -1.93
SNX1-205ENST00000559339 SLC25A29Q8N8R3 303 aa3.02□□□□□ -1.93
SNX1-205ENST00000559339 SREK1IP1Q8N9Q2 155 aaPredicted RBP3.02□□□□□ -1.93
SNX1-205ENST00000559339 MED9Q9NWA0 146 aa3.02□□□□□ -1.93
SNX1-205ENST00000559339 MUC4Q99102 2169 aa3.02□□□□□ -1.93
SNX1-205ENST00000559339 RYR3Q15413 4870 aa3.01□□□□□ -1.93
SNX1-205ENST00000559339 TMSB15BA0A087X1C1 80 aa3.01□□□□□ -1.93
SNX1-205ENST00000559339 GRIFINA4D1Z8 144 aa3.01□□□□□ -1.93
SNX1-205ENST00000559339 RTL8CO15255 209 aa3.01□□□□□ -1.93
SNX1-205ENST00000559339 NXPH4O95158 308 aa3.01□□□□□ -1.93
SNX1-205ENST00000559339 SMIM17P0DL12 118 aa3.01□□□□□ -1.93
SNX1-205ENST00000559339 MED14OSP0DP75 135 aa3.01□□□□□ -1.93
SNX1-205ENST00000559339 RPS20P60866 119 aaKnown RBP3.01□□□□□ -1.93
SNX1-205ENST00000559339 CENPWQ5EE01 88 aa3.01□□□□□ -1.93
SNX1-205ENST00000559339 SPANXN1Q5VSR9 72 aa3.01□□□□□ -1.93
SNX1-205ENST00000559339 NFE4Q86UQ8 179 aa3.01□□□□□ -1.93
SNX1-205ENST00000559339 C10orf126Q8N4M7 172 aa3.01□□□□□ -1.93
SNX1-205ENST00000559339 ATP6V0E2Q8NHE4 81 aa3.01□□□□□ -1.93
SNX1-205ENST00000559339 C11orf52Q96A22 123 aa3.01□□□□□ -1.93
SNX1-205ENST00000559339 MLST8Q9BVC4 326 aa3.01□□□□□ -1.93
SNX1-205ENST00000559339 TPPP3Q9BW30 176 aa3.01□□□□□ -1.93
SNX1-205ENST00000559339 PARLQ9H300 379 aa3.01□□□□□ -1.93
SNX1-205ENST00000559339 A0A087WWC5 75 aa3□□□□□ -1.93
SNX1-205ENST00000559339 A0A087WWL8 130 aa3□□□□□ -1.93
SNX1-205ENST00000559339 IGHV3-38A0A0C4DH36 116 aa3□□□□□ -1.93
SNX1-205ENST00000559339 LOC100131303A0A0U1RQF7 123 aa3□□□□□ -1.93
SNX1-205ENST00000559339 RBFOX3A6NFN3 312 aa3□□□□□ -1.93
SNX1-205ENST00000559339 F2Z2F3 143 aa3□□□□□ -1.93
SNX1-205ENST00000559339 F5H697 171 aa3□□□□□ -1.93
SNX1-205ENST00000559339 TMEM250H0YL14 139 aa3□□□□□ -1.93
SNX1-205ENST00000559339 P01737 135 aa3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms