RNA–Protein interactions for RNA: ENST00000559119.1

VPS13C-208, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

TSL 2

Gene VPS13C, Length 738 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-208ENST00000559119 C5orf63A6NC05 138 aa1.82□□□□□ -2.12
VPS13C-208ENST00000559119 RBMY1BA6NDE4 496 aaKnown RBP1.82□□□□□ -2.12
VPS13C-208ENST00000559119 RBMY1EA6NEQ0 496 aaKnown RBP1.82□□□□□ -2.12
VPS13C-208ENST00000559119 F5H768 121 aa1.82□□□□□ -2.12
VPS13C-208ENST00000559119 PEX7O00628 323 aa1.82□□□□□ -2.12
VPS13C-208ENST00000559119 UQCRQO14949 82 aa1.82□□□□□ -2.12
VPS13C-208ENST00000559119 NPFFO15130 113 aa1.82□□□□□ -2.12
VPS13C-208ENST00000559119 OR2H2O95918 312 aa1.82□□□□□ -2.12
VPS13C-208ENST00000559119 LTAP01374 205 aa1.82□□□□□ -2.12
VPS13C-208ENST00000559119 P01737 135 aa1.82□□□□□ -2.12
VPS13C-208ENST00000559119 IGKCP01834 107 aa1.82□□□□□ -2.12
VPS13C-208ENST00000559119 RBMY1DP0C7P1 496 aaKnown RBP1.82□□□□□ -2.12
VPS13C-208ENST00000559119 RBMY1A1P0DJD3 496 aaKnown RBP1.82□□□□□ -2.12
VPS13C-208ENST00000559119 LINC00694P0DN24 101 aa1.82□□□□□ -2.12
VPS13C-208ENST00000559119 CRYGAP11844 174 aa1.82□□□□□ -2.12
VPS13C-208ENST00000559119 HLA-DMBP28068 263 aa1.82□□□□□ -2.12
VPS13C-208ENST00000559119 UBE2D1P51668 147 aa1.82□□□□□ -2.12
VPS13C-208ENST00000559119 DLX6P56179 175 aa1.82□□□□□ -2.12
VPS13C-208ENST00000559119 PLGLB1Q02325 96 aa1.82□□□□□ -2.12
VPS13C-208ENST00000559119 CST6Q15828 149 aa1.82□□□□□ -2.12
VPS13C-208ENST00000559119 DEFB121Q5J5C9 76 aa1.82□□□□□ -2.12
VPS13C-208ENST00000559119 MIR17HGQ75NE6 70 aa1.82□□□□□ -2.12
VPS13C-208ENST00000559119 FAM19A5Q7Z5A7 132 aaPredicted RBP1.82□□□□□ -2.12
VPS13C-208ENST00000559119 C3orf22Q8N5N4 141 aa1.82□□□□□ -2.12
VPS13C-208ENST00000559119 OR4C13Q8NGP0 309 aa1.82□□□□□ -2.12
VPS13C-208ENST00000559119 FMC1Q96HJ9 113 aa1.82□□□□□ -2.12
VPS13C-208ENST00000559119 ZNF714Q96N38 554 aa1.82□□□□□ -2.12
VPS13C-208ENST00000559119 TRGV9Q99603 122 aa1.82□□□□□ -2.12
VPS13C-208ENST00000559119 NABP2Q9BQ15 211 aa1.82□□□□□ -2.12
VPS13C-208ENST00000559119 PRADC1Q9BSG0 188 aa1.82□□□□□ -2.12
VPS13C-208ENST00000559119 OR2H1Q9GZK4 316 aa1.82□□□□□ -2.12
VPS13C-208ENST00000559119 CALYQ9NYX4 217 aa1.82□□□□□ -2.12
VPS13C-208ENST00000559119 EPDR1Q9UM22 224 aa1.82□□□□□ -2.12
VPS13C-208ENST00000559119 DOCK8Q8NF50 2099 aa1.82□□□□□ -2.12
VPS13C-208ENST00000559119 KIAA2026Q5HYC2 2103 aa1.82□□□□□ -2.12
VPS13C-208ENST00000559119 TRAV2A0A0B4J234 112 aa1.81□□□□□ -2.12
VPS13C-208ENST00000559119 TRAV12-1A0A0B4J245 112 aa1.81□□□□□ -2.12
VPS13C-208ENST00000559119 TRAV8-4A0A0B4J246 113 aa1.81□□□□□ -2.12
VPS13C-208ENST00000559119 A0A1B0GUT8 65 aa1.81□□□□□ -2.12
VPS13C-208ENST00000559119 C17orf98A8MV24 154 aa1.81□□□□□ -2.12
VPS13C-208ENST00000559119 C12orf77C9JDV5 145 aa1.81□□□□□ -2.12
VPS13C-208ENST00000559119 INS-IGF2F8WCM5 200 aa1.81□□□□□ -2.12
VPS13C-208ENST00000559119 K7ERJ3 54 aa1.81□□□□□ -2.12
VPS13C-208ENST00000559119 DPM2O94777 84 aa1.81□□□□□ -2.12
VPS13C-208ENST00000559119 ACYP1P07311 99 aa1.81□□□□□ -2.12
VPS13C-208ENST00000559119 LGALS1P09382 135 aaKnown RBP1.81□□□□□ -2.12
VPS13C-208ENST00000559119 CECR9P0C854 216 aa1.81□□□□□ -2.12
VPS13C-208ENST00000559119 P0DMU3 169 aa1.81□□□□□ -2.12
VPS13C-208ENST00000559119 FAM231AP0DMU4 169 aa1.81□□□□□ -2.12
VPS13C-208ENST00000559119 FAM231CP0DMU5 169 aa1.81□□□□□ -2.12
VPS13C-208ENST00000559119 DEFA4P12838 97 aa1.81□□□□□ -2.12
VPS13C-208ENST00000559119 RPL7P18124 248 aaKnown RBP1.81□□□□□ -2.12
VPS13C-208ENST00000559119 COL8A2P25067 703 aa1.81□□□□□ -2.12
VPS13C-208ENST00000559119 FCER1GP30273 86 aa1.81□□□□□ -2.12
VPS13C-208ENST00000559119 GLRXP35754 106 aa1.81□□□□□ -2.12
VPS13C-208ENST00000559119 PCBD1P61457 104 aa1.81□□□□□ -2.12
VPS13C-208ENST00000559119 RPS21P63220 83 aaKnown RBP1.81□□□□□ -2.12
VPS13C-208ENST00000559119 NNATQ16517 81 aa1.81□□□□□ -2.12
VPS13C-208ENST00000559119 FAM104BQ5XKR9 115 aa1.81□□□□□ -2.12
VPS13C-208ENST00000559119 DEFB132Q7Z7B7 95 aa1.81□□□□□ -2.12
VPS13C-208ENST00000559119 Q8IYB0 196 aa1.81□□□□□ -2.12
VPS13C-208ENST00000559119 ANKRD29Q8N6D5 301 aa1.81□□□□□ -2.12
VPS13C-208ENST00000559119 C15orf53Q8NAA6 179 aa1.81□□□□□ -2.12
VPS13C-208ENST00000559119 OR8A1Q8NGG7 326 aa1.81□□□□□ -2.12
VPS13C-208ENST00000559119 SLC37A2Q8TED4 501 aa1.81□□□□□ -2.12
VPS13C-208ENST00000559119 FAM167A-AS1Q96KT0 104 aa1.81□□□□□ -2.12
VPS13C-208ENST00000559119 ODF3Q96PU9 254 aa1.81□□□□□ -2.12
VPS13C-208ENST00000559119 EMC6Q9BV81 110 aa1.81□□□□□ -2.12
VPS13C-208ENST00000559119 C21orf62Q9NYP8 219 aa1.81□□□□□ -2.12
VPS13C-208ENST00000559119 PRNDQ9UKY0 176 aa1.81□□□□□ -2.12
VPS13C-208ENST00000559119 THADAQ6YHU6 1953 aa1.81□□□□□ -2.12
VPS13C-208ENST00000559119 TNRC6AQ8NDV7 1962 aaKnown RBP1.81□□□□□ -2.12
VPS13C-208ENST00000559119 SCN10AQ9Y5Y9 1956 aa1.81□□□□□ -2.12
VPS13C-208ENST00000559119 EP400Q96L91 3159 aa1.8□□□□□ -2.12
VPS13C-208ENST00000559119 ATG2BQ96BY7 2078 aa1.8□□□□□ -2.12
VPS13C-208ENST00000559119 IGHV3OR15-7A0A075B7D8 119 aa1.8□□□□□ -2.12
VPS13C-208ENST00000559119 IGKV2D-26A0A0A0MRZ7 120 aa1.8□□□□□ -2.12
VPS13C-208ENST00000559119 TRAV8-2A0A0B4J237 113 aa1.8□□□□□ -2.12
VPS13C-208ENST00000559119 NCBP2LA6PVI3 153 aaKnown RBP1.8□□□□□ -2.12
VPS13C-208ENST00000559119 LGALS9O00182 355 aa1.8□□□□□ -2.12
VPS13C-208ENST00000559119 MRPS12O15235 138 aaKnown RBP1.8□□□□□ -2.12
VPS13C-208ENST00000559119 SLC25A20O43772 301 aa1.8□□□□□ -2.12
VPS13C-208ENST00000559119 FSTL3O95633 263 aa1.8□□□□□ -2.12
VPS13C-208ENST00000559119 TCL1BO95988 128 aa1.8□□□□□ -2.12
VPS13C-208ENST00000559119 CD7P09564 240 aa1.8□□□□□ -2.12
VPS13C-208ENST00000559119 IGLC6P0CF74 106 aa1.8□□□□□ -2.12
VPS13C-208ENST00000559119 COX7CP15954 63 aa1.8□□□□□ -2.12
VPS13C-208ENST00000559119 SLC25A16P16260 332 aa1.8□□□□□ -2.12
VPS13C-208ENST00000559119 PLNP26678 52 aa1.8□□□□□ -2.12
VPS13C-208ENST00000559119 CNTFRP26992 372 aa1.8□□□□□ -2.12
VPS13C-208ENST00000559119 IFI27P40305 119 aaPredicted RBP1.8□□□□□ -2.12
VPS13C-208ENST00000559119 UBE2AP49459 152 aa1.8□□□□□ -2.12
VPS13C-208ENST00000559119 PSMB2P49721 201 aa1.8□□□□□ -2.12
VPS13C-208ENST00000559119 ZNF138P52744 262 aa1.8□□□□□ -2.12
VPS13C-208ENST00000559119 EMP1P54849 157 aa1.8□□□□□ -2.12
VPS13C-208ENST00000559119 TMEM258P61165 79 aa1.8□□□□□ -2.12
VPS13C-208ENST00000559119 HSPE1P61604 102 aaKnown RBP1.8□□□□□ -2.12
VPS13C-208ENST00000559119 HERVK_113P63121 156 aa1.8□□□□□ -2.12
VPS13C-208ENST00000559119 ZNF816Q0VGE8 651 aaPredicted RBP1.8□□□□□ -2.12
VPS13C-208ENST00000559119 KRTAP6-3Q3LI67 103 aa1.8□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 97.8 ms