RNA–Protein interactions for RNA: ENST00000559108.1

TPM1-217, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 437 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-217ENST00000559108 NUPR2A6NF83 97 aa7.63□□□□□ -1.19
TPM1-217ENST00000559108 M0R2P5 195 aa7.63□□□□□ -1.19
TPM1-217ENST00000559108 IGLC6P0CF74 106 aa7.63□□□□□ -1.19
TPM1-217ENST00000559108 RPL23P62829 140 aaKnown RBP7.63□□□□□ -1.19
TPM1-217ENST00000559108 FHL2Q14192 279 aa7.63□□□□□ -1.19
TPM1-217ENST00000559108 PEA15Q15121 130 aa7.63□□□□□ -1.19
TPM1-217ENST00000559108 DMRTA1Q5VZB9 504 aa7.63□□□□□ -1.19
TPM1-217ENST00000559108 TMEM88Q6PEY1 159 aa7.63□□□□□ -1.19
TPM1-217ENST00000559108 OR10AG1Q8NH19 301 aa7.63□□□□□ -1.19
TPM1-217ENST00000559108 VSIG2Q96IQ7 327 aa7.63□□□□□ -1.19
TPM1-217ENST00000559108 SPXQ9BT56 116 aa7.63□□□□□ -1.19
TPM1-217ENST00000559108 SAMD10Q9BYL1 202 aa7.63□□□□□ -1.19
TPM1-217ENST00000559108 IL36BQ9NZH7 164 aa7.63□□□□□ -1.19
TPM1-217ENST00000559108 IGHV4-4A0A075B6R2 117 aa7.62□□□□□ -1.19
TPM1-217ENST00000559108 IGLL5B9A064 214 aa7.62□□□□□ -1.19
TPM1-217ENST00000559108 F5H768 121 aa7.62□□□□□ -1.19
TPM1-217ENST00000559108 SNAI2O43623 268 aa7.62□□□□□ -1.19
TPM1-217ENST00000559108 ATP5G1P05496 136 aa7.62□□□□□ -1.19
TPM1-217ENST00000559108 ZNF876PQ49A33 203 aa7.62□□□□□ -1.19
TPM1-217ENST00000559108 Q6ZSN1 163 aa7.62□□□□□ -1.19
TPM1-217ENST00000559108 OR2D3Q8NGH3 330 aa7.62□□□□□ -1.19
TPM1-217ENST00000559108 GTSF1Q8WW33 167 aa7.62□□□□□ -1.19
TPM1-217ENST00000559108 ISOC2Q96AB3 205 aa7.62□□□□□ -1.19
TPM1-217ENST00000559108 SSBP4Q9BWG4 385 aaPredicted RBP7.62□□□□□ -1.19
TPM1-217ENST00000559108 LY96Q9Y6Y9 160 aa7.62□□□□□ -1.19
TPM1-217ENST00000559108 TRGV2A0A075B6R0 118 aa7.61□□□□□ -1.19
TPM1-217ENST00000559108 RS1O15537 224 aa7.61□□□□□ -1.19
TPM1-217ENST00000559108 NXPH4O95158 308 aa7.61□□□□□ -1.19
TPM1-217ENST00000559108 CXCL1P09341 107 aa7.61□□□□□ -1.19
TPM1-217ENST00000559108 CFAP126Q5VTH2 177 aa7.61□□□□□ -1.19
TPM1-217ENST00000559108 UFSP1Q6NVU6 142 aa7.61□□□□□ -1.19
TPM1-217ENST00000559108 FAM231DQ6ZW35 169 aa7.61□□□□□ -1.19
TPM1-217ENST00000559108 COMMD7Q86VX2 200 aa7.61□□□□□ -1.19
TPM1-217ENST00000559108 SMDT1Q9H4I9 107 aa7.61□□□□□ -1.19
TPM1-217ENST00000559108 RPP21Q9H633 154 aaKnown RBP7.61□□□□□ -1.19
TPM1-217ENST00000559108 Q9UF83 564 aa7.61□□□□□ -1.19
TPM1-217ENST00000559108 DNAH1Q9P2D7 4330 aa7.6□□□□□ -1.19
TPM1-217ENST00000559108 TRAV26-1A0A087WT03 109 aa7.6□□□□□ -1.19
TPM1-217ENST00000559108 A0A0J9YY99 117 aa7.6□□□□□ -1.19
TPM1-217ENST00000559108 LINC00862A6NCI5 91 aa7.6□□□□□ -1.19
TPM1-217ENST00000559108 M0R381 172 aa7.6□□□□□ -1.19
TPM1-217ENST00000559108 P01737 135 aa7.6□□□□□ -1.19
TPM1-217ENST00000559108 S100A4P26447 101 aaKnown RBP7.6□□□□□ -1.19
TPM1-217ENST00000559108 TMEM241Q24JQ0 296 aa7.6□□□□□ -1.19
TPM1-217ENST00000559108 SOHLH1Q5JUK2 328 aa7.6□□□□□ -1.19
TPM1-217ENST00000559108 PTH2Q96A98 100 aa7.6□□□□□ -1.19
TPM1-217ENST00000559108 MSRB1Q9NZV6 116 aa7.6□□□□□ -1.19
TPM1-217ENST00000559108 SACSQ9NZJ4 4579 aa7.6□□□□□ -1.19
TPM1-217ENST00000559108 IGHV3-73A0A0B4J1V6 119 aa7.59□□□□□ -1.19
TPM1-217ENST00000559108 TRAV4A0A0B4J268 109 aa7.59□□□□□ -1.19
TPM1-217ENST00000559108 LOC100131303A0A0U1RQF7 123 aa7.59□□□□□ -1.19
TPM1-217ENST00000559108 OR5AL1P0C617 328 aa7.59□□□□□ -1.19
TPM1-217ENST00000559108 MED14OSP0DP75 135 aa7.59□□□□□ -1.19
TPM1-217ENST00000559108 CTRLP40313 264 aa7.59□□□□□ -1.19
TPM1-217ENST00000559108 SSTP61278 116 aa7.59□□□□□ -1.19
TPM1-217ENST00000559108 ADIRFQ15847 76 aa7.59□□□□□ -1.19
TPM1-217ENST00000559108 FAM74A3Q4VXF1 159 aa7.59□□□□□ -1.19
TPM1-217ENST00000559108 NAT8Q9UHE5 227 aa7.59□□□□□ -1.19
TPM1-217ENST00000559108 V9GYV3 84 aa7.59□□□□□ -1.19
TPM1-217ENST00000559108 VPS13DQ5THJ4 4388 aa7.58□□□□□ -1.2
TPM1-217ENST00000559108 GATCO43716 136 aaKnown RBP7.58□□□□□ -1.2
TPM1-217ENST00000559108 CRYGDP07320 174 aa7.58□□□□□ -1.2
TPM1-217ENST00000559108 CRYBA4P53673 196 aa7.58□□□□□ -1.2
TPM1-217ENST00000559108 ERVFC1-1P60608 527 aa7.58□□□□□ -1.2
TPM1-217ENST00000559108 FER1L6-AS1Q8NA97 138 aa7.58□□□□□ -1.2
TPM1-217ENST00000559108 DAZAP1Q96EP5 407 aaKnown RBP7.58□□□□□ -1.2
TPM1-217ENST00000559108 OSTCQ9NRP0 149 aa7.58□□□□□ -1.2
TPM1-217ENST00000559108 KIF25-AS1Q9Y6Z4 181 aa7.58□□□□□ -1.2
TPM1-217ENST00000559108 HYDINQ4G0P3 5121 aa7.57□□□□□ -1.2
TPM1-217ENST00000559108 A0A087WWL8 130 aa7.57□□□□□ -1.2
TPM1-217ENST00000559108 GATA1P15976 413 aaPredicted RBP7.57□□□□□ -1.2
TPM1-217ENST00000559108 LINC00315P59091 139 aa7.57□□□□□ -1.2
TPM1-217ENST00000559108 LYZL1Q6UWQ5 148 aa7.57□□□□□ -1.2
TPM1-217ENST00000559108 OR4C5Q8NGB2 326 aa7.57□□□□□ -1.2
TPM1-217ENST00000559108 LINC00476Q8WZB0 136 aa7.57□□□□□ -1.2
TPM1-217ENST00000559108 SFRP2Q96HF1 295 aa7.57□□□□□ -1.2
TPM1-217ENST00000559108 TPPP3Q9BW30 176 aa7.57□□□□□ -1.2
TPM1-217ENST00000559108 KLK5Q9Y337 293 aaPredicted RBP7.57□□□□□ -1.2
TPM1-217ENST00000559108 PHLDA3Q9Y5J5 127 aa7.57□□□□□ -1.2
TPM1-217ENST00000559108 A0A096LPF7 62 aa7.56□□□□□ -1.2
TPM1-217ENST00000559108 LCE6AA0A183 80 aa7.56□□□□□ -1.2
TPM1-217ENST00000559108 TMEM218A2RU14 115 aa7.56□□□□□ -1.2
TPM1-217ENST00000559108 RPS20P60866 119 aaKnown RBP7.56□□□□□ -1.2
TPM1-217ENST00000559108 PIK3CD-AS1Q5SR53 167 aa7.56□□□□□ -1.2
TPM1-217ENST00000559108 UQCC3Q6UW78 93 aa7.56□□□□□ -1.2
TPM1-217ENST00000559108 ZFP82Q8N141 532 aa7.56□□□□□ -1.2
TPM1-217ENST00000559108 C14orf178Q8N769 122 aaPredicted RBP7.56□□□□□ -1.2
TPM1-217ENST00000559108 BIN3Q9NQY0 253 aa7.56□□□□□ -1.2
TPM1-217ENST00000559108 RYR2Q92736 4967 aa7.56□□□□□ -1.2
TPM1-217ENST00000559108 P0DMU3 169 aa7.55□□□□□ -1.2
TPM1-217ENST00000559108 FAM231AP0DMU4 169 aa7.55□□□□□ -1.2
TPM1-217ENST00000559108 FAM231CP0DMU5 169 aa7.55□□□□□ -1.2
TPM1-217ENST00000559108 FOXA3P55318 350 aaPredicted RBP7.55□□□□□ -1.2
TPM1-217ENST00000559108 CT83Q5H943 113 aa7.55□□□□□ -1.2
TPM1-217ENST00000559108 SLC25A29Q8N8R3 303 aa7.55□□□□□ -1.2
TPM1-217ENST00000559108 FAM210BQ96KR6 192 aa7.55□□□□□ -1.2
TPM1-217ENST00000559108 NDUFAF3Q9BU61 184 aa7.55□□□□□ -1.2
TPM1-217ENST00000559108 CNFNQ9BYD5 112 aa7.55□□□□□ -1.2
TPM1-217ENST00000559108 HHLA3Q9XRX5 114 aa7.55□□□□□ -1.2
TPM1-217ENST00000559108 RYR3Q15413 4870 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms