RNA–Protein interactions for RNA: ENST00000559061.5

SNX1-204, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-204ENST00000559061 H3BVH4 76 aa7.97□□□□□ -1.13
SNX1-204ENST00000559061 ORM1P02763 201 aa7.97□□□□□ -1.13
SNX1-204ENST00000559061 OR5I1Q13606 314 aa7.97□□□□□ -1.13
SNX1-204ENST00000559061 PRR27Q6MZM9 219 aa7.97□□□□□ -1.13
SNX1-204ENST00000559061 PTH2Q96A98 100 aa7.97□□□□□ -1.13
SNX1-204ENST00000559061 IL36BQ9NZH7 164 aa7.97□□□□□ -1.13
SNX1-204ENST00000559061 TRGV2A0A075B6R0 118 aa7.96□□□□□ -1.14
SNX1-204ENST00000559061 TRAV26-1A0A087WT03 109 aa7.96□□□□□ -1.14
SNX1-204ENST00000559061 NDUFS6O75380 124 aaKnown RBP7.96□□□□□ -1.14
SNX1-204ENST00000559061 GNG4P50150 75 aa7.96□□□□□ -1.14
SNX1-204ENST00000559061 TCTAP57738 103 aa7.96□□□□□ -1.14
SNX1-204ENST00000559061 UFSP1Q6NVU6 142 aa7.96□□□□□ -1.14
SNX1-204ENST00000559061 OCC1Q8TAD7 63 aa7.96□□□□□ -1.14
SNX1-204ENST00000559061 SMIM12Q96EX1 92 aa7.96□□□□□ -1.14
SNX1-204ENST00000559061 FAM210BQ96KR6 192 aa7.96□□□□□ -1.14
SNX1-204ENST00000559061 NDUFAF3Q9BU61 184 aa7.96□□□□□ -1.14
SNX1-204ENST00000559061 JPT2Q9H910 190 aa7.96□□□□□ -1.14
SNX1-204ENST00000559061 DNAH2Q9P225 4427 aa7.96□□□□□ -1.14
SNX1-204ENST00000559061 TRAV4A0A0B4J268 109 aa7.95□□□□□ -1.14
SNX1-204ENST00000559061 A0A0J9YY99 117 aa7.95□□□□□ -1.14
SNX1-204ENST00000559061 RS1O15537 224 aa7.95□□□□□ -1.14
SNX1-204ENST00000559061 NXPH4O95158 308 aa7.95□□□□□ -1.14
SNX1-204ENST00000559061 CXCL1P09341 107 aa7.95□□□□□ -1.14
SNX1-204ENST00000559061 ARMS2P0C7Q2 107 aa7.95□□□□□ -1.14
SNX1-204ENST00000559061 GZMBP10144 247 aa7.95□□□□□ -1.14
SNX1-204ENST00000559061 ASIPP42127 132 aa7.95□□□□□ -1.14
SNX1-204ENST00000559061 CFAP126Q5VTH2 177 aa7.95□□□□□ -1.14
SNX1-204ENST00000559061 LGALS9CQ6DKI2 356 aa7.95□□□□□ -1.14
SNX1-204ENST00000559061 SAMD10Q9BYL1 202 aa7.95□□□□□ -1.14
SNX1-204ENST00000559061 DNAH10Q8IVF4 4471 aa7.95□□□□□ -1.14
SNX1-204ENST00000559061 SNAI2O43623 268 aa7.94□□□□□ -1.14
SNX1-204ENST00000559061 IGLC6P0CF74 106 aa7.94□□□□□ -1.14
SNX1-204ENST00000559061 MGST1P10620 155 aaKnown RBP7.94□□□□□ -1.14
SNX1-204ENST00000559061 CRYBA4P53673 196 aa7.94□□□□□ -1.14
SNX1-204ENST00000559061 ZNF876PQ49A33 203 aa7.94□□□□□ -1.14
SNX1-204ENST00000559061 Q6ZSN1 163 aa7.94□□□□□ -1.14
SNX1-204ENST00000559061 SSBP4Q9BWG4 385 aaPredicted RBP7.94□□□□□ -1.14
SNX1-204ENST00000559061 EIF5A2Q9GZV4 153 aaKnown RBP7.94□□□□□ -1.14
SNX1-204ENST00000559061 FRAS1Q86XX4 4008 aa7.94□□□□□ -1.14
SNX1-204ENST00000559061 LY6G6CO95867 125 aa7.93□□□□□ -1.14
SNX1-204ENST00000559061 NUDT10Q8NFP7 164 aa7.93□□□□□ -1.14
SNX1-204ENST00000559061 OR10AG1Q8NH19 301 aa7.93□□□□□ -1.14
SNX1-204ENST00000559061 NUDT11Q96G61 164 aa7.93□□□□□ -1.14
SNX1-204ENST00000559061 RNASE7Q9H1E1 156 aaKnown RBP7.93□□□□□ -1.14
SNX1-204ENST00000559061 Q9UF83 564 aa7.93□□□□□ -1.14
SNX1-204ENST00000559061 A0A096LPF7 62 aa7.92□□□□□ -1.14
SNX1-204ENST00000559061 MUC21A0A0G2JKD1 596 aa7.92□□□□□ -1.14
SNX1-204ENST00000559061 LOC100131303A0A0U1RQF7 123 aa7.92□□□□□ -1.14
SNX1-204ENST00000559061 MUC21A0A140T8X8 626 aa7.92□□□□□ -1.14
SNX1-204ENST00000559061 H3BNG1 76 aa7.92□□□□□ -1.14
SNX1-204ENST00000559061 MED14OSP0DP75 135 aa7.92□□□□□ -1.14
SNX1-204ENST00000559061 GATA1P15976 413 aaPredicted RBP7.92□□□□□ -1.14
SNX1-204ENST00000559061 CEBPGP53567 150 aa7.92□□□□□ -1.14
SNX1-204ENST00000559061 CLLU1Q5K131 121 aa7.92□□□□□ -1.14
SNX1-204ENST00000559061 LINC01551Q86U37 167 aa7.92□□□□□ -1.14
SNX1-204ENST00000559061 IGHV3-73A0A0B4J1V6 119 aa7.91□□□□□ -1.14
SNX1-204ENST00000559061 NUDT3O95989 172 aa7.91□□□□□ -1.14
SNX1-204ENST00000559061 CRYGDP07320 174 aa7.91□□□□□ -1.14
SNX1-204ENST00000559061 OR5AL1P0C617 328 aa7.91□□□□□ -1.14
SNX1-204ENST00000559061 S100A4P26447 101 aaKnown RBP7.91□□□□□ -1.14
SNX1-204ENST00000559061 PIK3CD-AS1Q5SR53 167 aa7.91□□□□□ -1.14
SNX1-204ENST00000559061 C15orf53Q8NAA6 179 aa7.91□□□□□ -1.14
SNX1-204ENST00000559061 OR4C5Q8NGB2 326 aa7.91□□□□□ -1.14
SNX1-204ENST00000559061 OR2D3Q8NGH3 330 aa7.91□□□□□ -1.14
SNX1-204ENST00000559061 SMIM7Q9BQ49 75 aa7.91□□□□□ -1.14
SNX1-204ENST00000559061 LY96Q9Y6Y9 160 aa7.91□□□□□ -1.14
SNX1-204ENST00000559061 FAT2Q9NYQ8 4349 aa7.9□□□□□ -1.14
SNX1-204ENST00000559061 LINC00694P0DN24 101 aa7.9□□□□□ -1.14
SNX1-204ENST00000559061 GTSF1Q8WW33 167 aa7.9□□□□□ -1.14
SNX1-204ENST00000559061 SFRP2Q96HF1 295 aa7.9□□□□□ -1.14
SNX1-204ENST00000559061 PRO0255Q9UI72 69 aa7.9□□□□□ -1.14
SNX1-204ENST00000559061 HHLA3Q9XRX5 114 aa7.9□□□□□ -1.14
SNX1-204ENST00000559061 LINC00588Q9Y4M8 146 aa7.9□□□□□ -1.14
SNX1-204ENST00000559061 TRGV4A0A0C4DH28 118 aa7.89□□□□□ -1.15
SNX1-204ENST00000559061 ZNF727A8MUV8 499 aa7.89□□□□□ -1.15
SNX1-204ENST00000559061 K7EQD1 137 aa7.89□□□□□ -1.15
SNX1-204ENST00000559061 M0R381 172 aa7.89□□□□□ -1.15
SNX1-204ENST00000559061 PAX4O43316 350 aa7.89□□□□□ -1.15
SNX1-204ENST00000559061 P01737 135 aa7.89□□□□□ -1.15
SNX1-204ENST00000559061 LINC00315P59091 139 aa7.89□□□□□ -1.15
SNX1-204ENST00000559061 RPL23P62829 140 aaKnown RBP7.89□□□□□ -1.15
SNX1-204ENST00000559061 ESRGQ1W209 222 aa7.89□□□□□ -1.15
SNX1-204ENST00000559061 FAM231DQ6ZW35 169 aa7.89□□□□□ -1.15
SNX1-204ENST00000559061 C14orf178Q8N769 122 aaPredicted RBP7.89□□□□□ -1.15
SNX1-204ENST00000559061 SLC25A29Q8N8R3 303 aa7.89□□□□□ -1.15
SNX1-204ENST00000559061 RPP21Q9H633 154 aaKnown RBP7.89□□□□□ -1.15
SNX1-204ENST00000559061 MSRB1Q9NZV6 116 aa7.89□□□□□ -1.15
SNX1-204ENST00000559061 KIF25-AS1Q9Y6Z4 181 aa7.89□□□□□ -1.15
SNX1-204ENST00000559061 DNAH17Q9UFH2 4485 aa7.88□□□□□ -1.15
SNX1-204ENST00000559061 A0A087WWL8 130 aa7.88□□□□□ -1.15
SNX1-204ENST00000559061 P0DMU3 169 aa7.88□□□□□ -1.15
SNX1-204ENST00000559061 FAM231AP0DMU4 169 aa7.88□□□□□ -1.15
SNX1-204ENST00000559061 FAM231CP0DMU5 169 aa7.88□□□□□ -1.15
SNX1-204ENST00000559061 CTRLP40313 264 aa7.88□□□□□ -1.15
SNX1-204ENST00000559061 PEA15Q15121 130 aa7.88□□□□□ -1.15
SNX1-204ENST00000559061 ZFP82Q8N141 532 aa7.88□□□□□ -1.15
SNX1-204ENST00000559061 ZNRF2Q8NHG8 242 aa7.88□□□□□ -1.15
SNX1-204ENST00000559061 ISOC2Q96AB3 205 aa7.88□□□□□ -1.15
SNX1-204ENST00000559061 PHLDA3Q9Y5J5 127 aa7.88□□□□□ -1.15
SNX1-204ENST00000559061 A8MWV9 139 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms