RNA–Protein interactions for RNA: ENST00000558890.5

LRRC28-211, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 978 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-211ENST00000558890 TNP2Q05952 138 aa5.78□□□□□ -1.48
LRRC28-211ENST00000558890 TDRG1Q3Y452 100 aa5.78□□□□□ -1.48
LRRC28-211ENST00000558890 Q6ZN92 141 aa5.78□□□□□ -1.48
LRRC28-211ENST00000558890 C9orf47Q6ZRZ4 202 aa5.78□□□□□ -1.48
LRRC28-211ENST00000558890 AMN1Q8IY45 258 aa5.78□□□□□ -1.48
LRRC28-211ENST00000558890 OR9G4Q8NGQ1 327 aa5.78□□□□□ -1.48
LRRC28-211ENST00000558890 OR10J6PQ8NGY7 276 aa5.78□□□□□ -1.48
LRRC28-211ENST00000558890 SNHG12Q9BXW3 62 aa5.78□□□□□ -1.48
LRRC28-211ENST00000558890 LAMTOR2Q9Y2Q5 125 aa5.78□□□□□ -1.48
LRRC28-211ENST00000558890 LENEPQ9Y5L5 61 aa5.78□□□□□ -1.48
LRRC28-211ENST00000558890 U3KQK5 164 aa5.78□□□□□ -1.48
LRRC28-211ENST00000558890 TGP01266 2768 aa5.77□□□□□ -1.49
LRRC28-211ENST00000558890 TRAV2A0A0B4J234 112 aa5.77□□□□□ -1.49
LRRC28-211ENST00000558890 TRAV25A0A0B4J276 109 aa5.77□□□□□ -1.49
LRRC28-211ENST00000558890 OR4C46A6NHA9 309 aa5.77□□□□□ -1.49
LRRC28-211ENST00000558890 CRXO43186 299 aaPredicted RBP5.77□□□□□ -1.49
LRRC28-211ENST00000558890 TRBV12-3P01733 135 aa5.77□□□□□ -1.49
LRRC28-211ENST00000558890 IGLC3P0DOY3 106 aa5.77□□□□□ -1.49
LRRC28-211ENST00000558890 CKS2P33552 79 aa5.77□□□□□ -1.49
LRRC28-211ENST00000558890 CACNG7P62955 275 aa5.77□□□□□ -1.49
LRRC28-211ENST00000558890 NSUN5P1Q3KNT7 163 aa5.77□□□□□ -1.49
LRRC28-211ENST00000558890 MRPL51Q4U2R6 128 aaKnown RBP5.77□□□□□ -1.49
LRRC28-211ENST00000558890 ATOH7Q8N100 152 aa5.77□□□□□ -1.49
LRRC28-211ENST00000558890 LINC00469Q8N7U9 141 aa5.77□□□□□ -1.49
LRRC28-211ENST00000558890 LINC00477Q96M19 166 aa5.77□□□□□ -1.49
LRRC28-211ENST00000558890 CNFNQ9BYD5 112 aa5.77□□□□□ -1.49
LRRC28-211ENST00000558890 AGPAT4-IT1Q9H0P7 198 aa5.77□□□□□ -1.49
LRRC28-211ENST00000558890 MAP1LC3AQ9H492 121 aa5.77□□□□□ -1.49
LRRC28-211ENST00000558890 ST20Q9HBF5 79 aa5.77□□□□□ -1.49
LRRC28-211ENST00000558890 PPP1R14DQ9NXH3 145 aa5.77□□□□□ -1.49
LRRC28-211ENST00000558890 TIMM8BQ9Y5J9 83 aaPredicted RBP5.77□□□□□ -1.49
LRRC28-211ENST00000558890 NUTF2P61970 127 aaKnown RBP5.76□□□□□ -1.49
LRRC28-211ENST00000558890 BATFQ16520 125 aa5.76□□□□□ -1.49
LRRC28-211ENST00000558890 C9orf66Q5T8R8 295 aa5.76□□□□□ -1.49
LRRC28-211ENST00000558890 UNQ9165/PRO28630Q6UXU0 137 aa5.76□□□□□ -1.49
LRRC28-211ENST00000558890 DLX4Q92988 240 aaPredicted RBP5.76□□□□□ -1.49
LRRC28-211ENST00000558890 SORL1Q92673 2214 aa5.76□□□□□ -1.49
LRRC28-211ENST00000558890 TRAV21A0A0B4J279 112 aa5.75□□□□□ -1.49
LRRC28-211ENST00000558890 MUC21A0A0G2JKD1 596 aa5.75□□□□□ -1.49
LRRC28-211ENST00000558890 IGHV7-4-1A0A0J9YVY3 117 aa5.75□□□□□ -1.49
LRRC28-211ENST00000558890 MUC21A0A140T8X8 626 aa5.75□□□□□ -1.49
LRRC28-211ENST00000558890 LOC389332A0A1B0GUA5 103 aa5.75□□□□□ -1.49
LRRC28-211ENST00000558890 A0A1W2PRX2 142 aa5.75□□□□□ -1.49
LRRC28-211ENST00000558890 H0Y8G0 127 aa5.75□□□□□ -1.49
LRRC28-211ENST00000558890 HBDP02042 147 aa5.75□□□□□ -1.49
LRRC28-211ENST00000558890 ID1P41134 155 aa5.75□□□□□ -1.49
LRRC28-211ENST00000558890 SYNJ2BPP57105 145 aa5.75□□□□□ -1.49
LRRC28-211ENST00000558890 RPL11P62913 178 aaKnown RBP5.75□□□□□ -1.49
LRRC28-211ENST00000558890 DEFB136Q30KP8 78 aa5.75□□□□□ -1.49
LRRC28-211ENST00000558890 MUC21Q5SSG8 566 aa5.75□□□□□ -1.49
LRRC28-211ENST00000558890 COL5A1-AS1Q5SY13 56 aa5.75□□□□□ -1.49
LRRC28-211ENST00000558890 KPRPQ5T749 579 aaPredicted RBP5.75□□□□□ -1.49
LRRC28-211ENST00000558890 FAM110AQ9BQ89 295 aa5.75□□□□□ -1.49
LRRC28-211ENST00000558890 MS4A6AQ9H2W1 248 aa5.75□□□□□ -1.49
LRRC28-211ENST00000558890 SMPXQ9UHP9 88 aa5.75□□□□□ -1.49
LRRC28-211ENST00000558890 IGKV3D-20A0A0C4DH25 116 aa5.74□□□□□ -1.49
LRRC28-211ENST00000558890 TRBV7-9A0A0J9YWB2 115 aa5.74□□□□□ -1.49
LRRC28-211ENST00000558890 SOCS3O14543 225 aa5.74□□□□□ -1.49
LRRC28-211ENST00000558890 TCAPO15273 167 aa5.74□□□□□ -1.49
LRRC28-211ENST00000558890 NCR2O95944 276 aa5.74□□□□□ -1.49
LRRC28-211ENST00000558890 NPYP01303 97 aa5.74□□□□□ -1.49
LRRC28-211ENST00000558890 IGLV1-51P01701 117 aa5.74□□□□□ -1.49
LRRC28-211ENST00000558890 IGLL1P15814 213 aa5.74□□□□□ -1.49
LRRC28-211ENST00000558890 IFI27P40305 119 aaPredicted RBP5.74□□□□□ -1.49
LRRC28-211ENST00000558890 ASIPP42127 132 aa5.74□□□□□ -1.49
LRRC28-211ENST00000558890 SLURP1P55000 103 aa5.74□□□□□ -1.49
LRRC28-211ENST00000558890 LCE2AQ5TA79 106 aaPredicted RBP5.74□□□□□ -1.49
LRRC28-211ENST00000558890 SPANXN1Q5VSR9 72 aa5.74□□□□□ -1.49
LRRC28-211ENST00000558890 LINC01545Q5VT33 79 aa5.74□□□□□ -1.49
LRRC28-211ENST00000558890 LINC00173Q6ZV60 143 aa5.74□□□□□ -1.49
LRRC28-211ENST00000558890 C20orf173Q96LM9 149 aa5.74□□□□□ -1.49
LRRC28-211ENST00000558890 SPAG8Q99932 426 aaPredicted RBP5.74□□□□□ -1.49
LRRC28-211ENST00000558890 RHPN1-AS1Q9BWJ2 59 aa5.74□□□□□ -1.49
LRRC28-211ENST00000558890 NXT2Q9NPJ8 142 aaKnown RBP5.74□□□□□ -1.49
LRRC28-211ENST00000558890 MRPS16Q9Y3D3 137 aaKnown RBP5.74□□□□□ -1.49
LRRC28-211ENST00000558890 SMKR1H3BMG3 65 aa5.73□□□□□ -1.49
LRRC28-211ENST00000558890 SNAI2O43623 268 aa5.73□□□□□ -1.49
LRRC28-211ENST00000558890 MED14OSP0DP75 135 aa5.73□□□□□ -1.49
LRRC28-211ENST00000558890 S100A4P26447 101 aaKnown RBP5.73□□□□□ -1.49
LRRC28-211ENST00000558890 TSPOP30536 169 aa5.73□□□□□ -1.49
LRRC28-211ENST00000558890 CMC4P56277 68 aaPredicted RBP5.73□□□□□ -1.49
LRRC28-211ENST00000558890 BEAN1Q3B7T3 259 aa5.73□□□□□ -1.49
LRRC28-211ENST00000558890 LCE2CQ5TA81 110 aa5.73□□□□□ -1.49
LRRC28-211ENST00000558890 SPATA12Q7Z6I5 190 aa5.73□□□□□ -1.49
LRRC28-211ENST00000558890 OR8A1Q8NGG7 326 aa5.73□□□□□ -1.49
LRRC28-211ENST00000558890 RNF185Q96GF1 192 aa5.73□□□□□ -1.49
LRRC28-211ENST00000558890 DUX3Q96PT4 197 aa5.73□□□□□ -1.49
LRRC28-211ENST00000558890 PMCHL2Q9BQD1 86 aa5.73□□□□□ -1.49
LRRC28-211ENST00000558890 HUWE1Q7Z6Z7 4374 aaKnown RBP5.72□□□□□ -1.49
LRRC28-211ENST00000558890 IGHV4-4A0A075B6R2 117 aa5.72□□□□□ -1.49
LRRC28-211ENST00000558890 G3V4G9 280 aa5.72□□□□□ -1.49
LRRC28-211ENST00000558890 H3BVH4 76 aa5.72□□□□□ -1.49
LRRC28-211ENST00000558890 TNFRSF6BO95407 300 aa5.72□□□□□ -1.49
LRRC28-211ENST00000558890 EGFEM1PQ0D2K5 195 aa5.72□□□□□ -1.49
LRRC28-211ENST00000558890 DEFB114Q30KQ6 69 aa5.72□□□□□ -1.49
LRRC28-211ENST00000558890 LGALS9BQ3B8N2 356 aa5.72□□□□□ -1.49
LRRC28-211ENST00000558890 MAJINQ3KP22 176 aa5.72□□□□□ -1.49
LRRC28-211ENST00000558890 TM4SF20Q53R12 229 aa5.72□□□□□ -1.49
LRRC28-211ENST00000558890 LGALS9CQ6DKI2 356 aa5.72□□□□□ -1.49
LRRC28-211ENST00000558890 SLC25A34Q6PIV7 304 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms