RNA–Protein interactions for RNA: ENST00000558847.1

CASC4-206, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 622 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-206ENST00000558847 KDM5CP41229 1560 aa0.86□□□□□ -2.27
CASC4-206ENST00000558847 ZCCHC6Q5VYS8 1495 aaKnown RBP0.86□□□□□ -2.27
CASC4-206ENST00000558847 LOC105371267A0A1B0GV96 52 aa0.85□□□□□ -2.27
CASC4-206ENST00000558847 TSPAN19P0C672 248 aa0.85□□□□□ -2.27
CASC4-206ENST00000558847 MPC1LP0DKB6 136 aa0.85□□□□□ -2.27
CASC4-206ENST00000558847 SMCO1Q147U7 214 aa0.85□□□□□ -2.27
CASC4-206ENST00000558847 TMEM14BQ9NUH8 114 aa0.85□□□□□ -2.27
CASC4-206ENST00000558847 COPZ2Q9P299 210 aa0.85□□□□□ -2.27
CASC4-206ENST00000558847 FBN2P35556 2912 aa0.84□□□□□ -2.27
CASC4-206ENST00000558847 TRAV12-2A0A075B6T6 113 aa0.84□□□□□ -2.27
CASC4-206ENST00000558847 MCRIP1C9JLW8 97 aa0.84□□□□□ -2.27
CASC4-206ENST00000558847 SPINK7P58062 85 aa0.84□□□□□ -2.27
CASC4-206ENST00000558847 RPL37P61927 97 aaKnown RBP0.84□□□□□ -2.27
CASC4-206ENST00000558847 LSM2Q9Y333 95 aaKnown RBP0.84□□□□□ -2.27
CASC4-206ENST00000558847 IGLC6P0CF74 106 aa0.83□□□□□ -2.28
CASC4-206ENST00000558847 KRTAP19-3Q7Z4W3 81 aa0.83□□□□□ -2.28
CASC4-206ENST00000558847 CTAGE3PQ8IX95 158 aa0.83□□□□□ -2.28
CASC4-206ENST00000558847 SMIM3Q9BZL3 60 aa0.83□□□□□ -2.28
CASC4-206ENST00000558847 BET1LQ9NYM9 111 aa0.83□□□□□ -2.28
CASC4-206ENST00000558847 KNTC1P50748 2209 aa0.83□□□□□ -2.28
CASC4-206ENST00000558847 ATG2AQ2TAZ0 1938 aa0.82□□□□□ -2.28
CASC4-206ENST00000558847 TMEM141Q96I45 108 aa0.82□□□□□ -2.28
CASC4-206ENST00000558847 PAIP2BQ9ULR5 123 aaKnown RBP0.82□□□□□ -2.28
CASC4-206ENST00000558847 LRP5O75197 1615 aa0.82□□□□□ -2.28
CASC4-206ENST00000558847 CPDO75976 1380 aa0.82□□□□□ -2.28
CASC4-206ENST00000558847 SLC25A6P12236 298 aa0.81□□□□□ -2.28
CASC4-206ENST00000558847 SMIM21Q3B7S5 101 aa0.81□□□□□ -2.28
CASC4-206ENST00000558847 DSCR8Q96T75 97 aa0.81□□□□□ -2.28
CASC4-206ENST00000558847 PLAC8Q9NZF1 115 aa0.81□□□□□ -2.28
CASC4-206ENST00000558847 HELZP42694 1942 aaKnown RBP0.81□□□□□ -2.28
CASC4-206ENST00000558847 TRPM7Q96QT4 1865 aa0.8□□□□□ -2.28
CASC4-206ENST00000558847 TCRBV3S1A0A5B6 114 aa0.8□□□□□ -2.28
CASC4-206ENST00000558847 ZNF670-ZNF695F2Z2N8 137 aa0.8□□□□□ -2.28
CASC4-206ENST00000558847 LY6G6CO95867 125 aa0.8□□□□□ -2.28
CASC4-206ENST00000558847 VSTM2AQ8TAG5 236 aa0.8□□□□□ -2.28
CASC4-206ENST00000558847 ZNF462Q96JM2 2506 aa0.79□□□□□ -2.28
CASC4-206ENST00000558847 A0A096LNT2 108 aa0.79□□□□□ -2.28
CASC4-206ENST00000558847 PYYP10082 97 aa0.79□□□□□ -2.28
CASC4-206ENST00000558847 COX4I1P13073 169 aa0.79□□□□□ -2.28
CASC4-206ENST00000558847 SCIMPQ6UWF3 145 aa0.79□□□□□ -2.28
CASC4-206ENST00000558847 PFDN5Q99471 154 aa0.79□□□□□ -2.28
CASC4-206ENST00000558847 RBAKDNA6NC62 111 aa0.78□□□□□ -2.28
CASC4-206ENST00000558847 K7ERU9 68 aa0.78□□□□□ -2.28
CASC4-206ENST00000558847 OR2T2Q6IF00 324 aa0.78□□□□□ -2.28
CASC4-206ENST00000558847 CYP2G1PQ6ZSU1 146 aa0.78□□□□□ -2.28
CASC4-206ENST00000558847 PRG4Q92954 1404 aaPredicted RBP0.78□□□□□ -2.28
CASC4-206ENST00000558847 CEP152O94986 1710 aa0.78□□□□□ -2.29
CASC4-206ENST00000558847 DLEC1Q9Y238 1755 aa0.78□□□□□ -2.29
CASC4-206ENST00000558847 FAM236AA0A1B0GUQ0 79 aa0.77□□□□□ -2.29
CASC4-206ENST00000558847 FAM236BA0A1B0GV22 79 aa0.77□□□□□ -2.29
CASC4-206ENST00000558847 LINC00694P0DN24 101 aa0.77□□□□□ -2.29
CASC4-206ENST00000558847 SPANXN1Q5VSR9 72 aa0.77□□□□□ -2.29
CASC4-206ENST00000558847 TSTD1Q8NFU3 115 aa0.77□□□□□ -2.29
CASC4-206ENST00000558847 TCEAL4Q96EI5 215 aa0.77□□□□□ -2.29
CASC4-206ENST00000558847 FAM103A1Q9BTL3 118 aaKnown RBP0.77□□□□□ -2.29
CASC4-206ENST00000558847 BCORL1Q5H9F3 1711 aa0.77□□□□□ -2.29
CASC4-206ENST00000558847 SYNJ1O43426 1573 aa0.76□□□□□ -2.29
CASC4-206ENST00000558847 ERCC6Q03468 1493 aa0.76□□□□□ -2.29
CASC4-206ENST00000558847 RRAS2P62070 204 aaPredicted RBP0.76□□□□□ -2.29
CASC4-206ENST00000558847 SPCS2Q15005 226 aa0.76□□□□□ -2.29
CASC4-206ENST00000558847 LINC01545Q5VT33 79 aa0.76□□□□□ -2.29
CASC4-206ENST00000558847 IFI27L1Q96BM0 104 aa0.76□□□□□ -2.29
CASC4-206ENST00000558847 PSMG3Q9BT73 122 aaPredicted RBP0.76□□□□□ -2.29
CASC4-206ENST00000558847 RREB1Q92766 1687 aa0.75□□□□□ -2.29
CASC4-206ENST00000558847 TENM3Q9P273 2699 aa0.75□□□□□ -2.29
CASC4-206ENST00000558847 KCPQ6ZWJ8 1503 aa0.75□□□□□ -2.29
CASC4-206ENST00000558847 GUCA1AP43080 201 aaPredicted RBP0.75□□□□□ -2.29
CASC4-206ENST00000558847 SSBP1Q04837 148 aaKnown RBP0.75□□□□□ -2.29
CASC4-206ENST00000558847 TSKUQ8WUA8 353 aa0.75□□□□□ -2.29
CASC4-206ENST00000558847 AFDNP55196 1824 aaKnown RBP0.75□□□□□ -2.29
CASC4-206ENST00000558847 NPFFO15130 113 aa0.74□□□□□ -2.29
CASC4-206ENST00000558847 ELOF1P60002 83 aaKnown RBP0.74□□□□□ -2.29
CASC4-206ENST00000558847 S100A12P80511 92 aa0.74□□□□□ -2.29
CASC4-206ENST00000558847 NDUFA12Q9UI09 145 aa0.74□□□□□ -2.29
CASC4-206ENST00000558847 A6NIN4 97 aa0.73□□□□□ -2.29
CASC4-206ENST00000558847 F2Z2F3 143 aa0.73□□□□□ -2.29
CASC4-206ENST00000558847 COPZ1P61923 177 aa0.73□□□□□ -2.29
CASC4-206ENST00000558847 RPS25P62851 125 aaKnown RBP0.73□□□□□ -2.29
CASC4-206ENST00000558847 EMX2Q04743 252 aa0.73□□□□□ -2.29
CASC4-206ENST00000558847 FAM74A4Q5TZK3 123 aa0.73□□□□□ -2.29
CASC4-206ENST00000558847 MIC13Q5XKP0 118 aa0.73□□□□□ -2.29
CASC4-206ENST00000558847 RPL7L1Q6DKI1 246 aaKnown RBP0.73□□□□□ -2.29
CASC4-206ENST00000558847 TMEM191AQ9H0A3 160 aa0.73□□□□□ -2.29
CASC4-206ENST00000558847 TPT1P8Q9HAU6 139 aa0.73□□□□□ -2.29
CASC4-206ENST00000558847 ZNF469Q96JG9 3925 aaPredicted RBP0.73□□□□□ -2.29
CASC4-206ENST00000558847 TMEM2Q9UHN6 1383 aa0.72□□□□□ -2.29
CASC4-206ENST00000558847 TFF1P04155 84 aa0.72□□□□□ -2.29
CASC4-206ENST00000558847 PIPP12273 146 aaPredicted RBP0.72□□□□□ -2.29
CASC4-206ENST00000558847 ESPL1Q14674 2120 aa0.72□□□□□ -2.29
CASC4-206ENST00000558847 Q6ZUT4 128 aa0.72□□□□□ -2.29
CASC4-206ENST00000558847 LOC285556D6RIA3 1793 aa0.71□□□□□ -2.3
CASC4-206ENST00000558847 CASZ1Q86V15 1759 aa0.71□□□□□ -2.3
CASC4-206ENST00000558847 TRAV12-3A0A0B4J271 114 aa0.71□□□□□ -2.3
CASC4-206ENST00000558847 IFNA17P01571 189 aa0.71□□□□□ -2.3
CASC4-206ENST00000558847 PIRTP0C851 137 aa0.71□□□□□ -2.3
CASC4-206ENST00000558847 CCL3L1P16619 93 aa0.71□□□□□ -2.3
CASC4-206ENST00000558847 SLC48A1Q6P1K1 146 aa0.71□□□□□ -2.3
CASC4-206ENST00000558847 RPRMQ9NS64 109 aa0.71□□□□□ -2.3
CASC4-206ENST00000558847 CCDC167Q9P0B6 97 aa0.71□□□□□ -2.3
CASC4-206ENST00000558847 PTPRMP28827 1452 aa0.71□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 100.1 ms