RNA–Protein interactions for RNA: ENST00000558787.1

MARK3-215, Transcript of microtubule affinity regulating kinase 3, human

TSL 2

Gene MARK3, Length 758 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MARK3-215	ENST00000558787	PEX7	O00628	323 aa		4.86	□□□□□ -1.63
MARK3-215	ENST00000558787	TCRA	P04437	139 aa		4.86	□□□□□ -1.63
MARK3-215	ENST00000558787	S100A9	P06702	114 aa	Known RBP	4.86	□□□□□ -1.63
MARK3-215	ENST00000558787	SOHLH1	Q5JUK2	328 aa		4.86	□□□□□ -1.63
MARK3-215	ENST00000558787	CYB561D1	Q8N8Q1	229 aa		4.86	□□□□□ -1.63
MARK3-215	ENST00000558787	NTN5	Q8WTR8	489 aa	Predicted RBP	4.86	□□□□□ -1.63
MARK3-215	ENST00000558787	C16orf74	Q96GX8	76 aa		4.86	□□□□□ -1.63
MARK3-215	ENST00000558787	EPDR1	Q9UM22	224 aa		4.86	□□□□□ -1.63
MARK3-215	ENST00000558787	COX11	Q9Y6N1	276 aa		4.86	□□□□□ -1.63
MARK3-215	ENST00000558787	MAL	P21145	153 aa		4.85	□□□□□ -1.63
MARK3-215	ENST00000558787	CCL18	P55774	89 aa		4.85	□□□□□ -1.63
MARK3-215	ENST00000558787	FAM74A3	Q4VXF1	159 aa		4.85	□□□□□ -1.63
MARK3-215	ENST00000558787		Q6ZQT7	251 aa		4.85	□□□□□ -1.63
MARK3-215	ENST00000558787	ZNF493	Q6ZR52	646 aa		4.85	□□□□□ -1.63
MARK3-215	ENST00000558787		Q6ZTI0	123 aa		4.85	□□□□□ -1.63
MARK3-215	ENST00000558787	C6orf223	Q8N319	242 aa		4.85	□□□□□ -1.63
MARK3-215	ENST00000558787	TMEM263	Q8WUH6	116 aa	Known RBP	4.85	□□□□□ -1.63
MARK3-215	ENST00000558787	C11orf52	Q96A22	123 aa		4.85	□□□□□ -1.63
MARK3-215	ENST00000558787	FMC1	Q96HJ9	113 aa		4.85	□□□□□ -1.63
MARK3-215	ENST00000558787	KRTAP1-5	Q9BYS1	174 aa		4.85	□□□□□ -1.63
MARK3-215	ENST00000558787	TREM1	Q9NP99	234 aa		4.85	□□□□□ -1.63
MARK3-215	ENST00000558787	RPH3AL	Q9UNE2	315 aa		4.85	□□□□□ -1.63
MARK3-215	ENST00000558787	DNAH5	Q8TE73	4624 aa		4.85	□□□□□ -1.63
MARK3-215	ENST00000558787	HSPG2	P98160	4391 aa		4.85	□□□□□ -1.63
MARK3-215	ENST00000558787	SNURFL	B1AK76	121 aa		4.84	□□□□□ -1.63
MARK3-215	ENST00000558787	SRP19	P09132	144 aa	Known RBP	4.84	□□□□□ -1.63
MARK3-215	ENST00000558787	RNASE4	P34096	147 aa	Known RBP	4.84	□□□□□ -1.63
MARK3-215	ENST00000558787	LEP	P41159	167 aa		4.84	□□□□□ -1.63
MARK3-215	ENST00000558787	AKR1C3	P42330	323 aa		4.84	□□□□□ -1.63
MARK3-215	ENST00000558787	FAM3B	P58499	235 aa	Predicted RBP	4.84	□□□□□ -1.63
MARK3-215	ENST00000558787	UBE2G1	P62253	170 aa		4.84	□□□□□ -1.63
MARK3-215	ENST00000558787	GNG5	P63218	68 aa		4.84	□□□□□ -1.63
MARK3-215	ENST00000558787	ESRG	Q1W209	222 aa		4.84	□□□□□ -1.63
MARK3-215	ENST00000558787	TMEM78	Q5T7P6	136 aa		4.84	□□□□□ -1.63
MARK3-215	ENST00000558787	GOLT1A	Q6ZVE7	132 aa		4.84	□□□□□ -1.63
MARK3-215	ENST00000558787	LINC00612	Q8N6U2	182 aa		4.84	□□□□□ -1.63
MARK3-215	ENST00000558787	TMEM75	Q8N9X5	138 aa		4.84	□□□□□ -1.63
MARK3-215	ENST00000558787	LINC00477	Q96M19	166 aa		4.84	□□□□□ -1.63
MARK3-215	ENST00000558787	NDFIP1	Q9BT67	221 aa		4.84	□□□□□ -1.63
MARK3-215	ENST00000558787	AGPAT4-IT1	Q9H0P7	198 aa		4.84	□□□□□ -1.63
MARK3-215	ENST00000558787		Q9H8V8	135 aa		4.84	□□□□□ -1.63
MARK3-215	ENST00000558787	GSN-AS1	Q9NRJ2	163 aa		4.84	□□□□□ -1.63
MARK3-215	ENST00000558787	KLF12	Q9Y4X4	402 aa		4.84	□□□□□ -1.63
MARK3-215	ENST00000558787	APOB	P04114	4563 aa	Known RBP	4.83	□□□□□ -1.64
MARK3-215	ENST00000558787	IGKV2-40	A0A087WW87	121 aa	Predicted RBP	4.83	□□□□□ -1.64
MARK3-215	ENST00000558787	TRBV7-9	A0A0J9YWB2	115 aa		4.83	□□□□□ -1.64
MARK3-215	ENST00000558787	TRBV6-1	A0A0K0K1D8	114 aa		4.83	□□□□□ -1.64
MARK3-215	ENST00000558787	C16orf90	A8MZG2	172 aa		4.83	□□□□□ -1.64
MARK3-215	ENST00000558787	IGKV2D-40	P01614	121 aa	Predicted RBP	4.83	□□□□□ -1.64
MARK3-215	ENST00000558787	SFTA3	P0C7M3	94 aa		4.83	□□□□□ -1.64
MARK3-215	ENST00000558787	RPL35	P42766	123 aa	Known RBP	4.83	□□□□□ -1.64
MARK3-215	ENST00000558787	ZNF138	P52744	262 aa		4.83	□□□□□ -1.64
MARK3-215	ENST00000558787	CEBPG	P53567	150 aa		4.83	□□□□□ -1.64
MARK3-215	ENST00000558787	FLI1	Q01543	452 aa	Predicted RBP	4.83	□□□□□ -1.64
MARK3-215	ENST00000558787	BTN1A1	Q13410	526 aa		4.83	□□□□□ -1.64
MARK3-215	ENST00000558787	TMEM183B	Q1AE95	376 aa		4.83	□□□□□ -1.64
MARK3-215	ENST00000558787	SAPCD1	Q5SSQ6	148 aa		4.83	□□□□□ -1.64
MARK3-215	ENST00000558787	C9orf47	Q6ZRZ4	202 aa		4.83	□□□□□ -1.64
MARK3-215	ENST00000558787	SMIM12	Q96EX1	92 aa		4.83	□□□□□ -1.64
MARK3-215	ENST00000558787	ODF3	Q96PU9	254 aa		4.83	□□□□□ -1.64
MARK3-215	ENST00000558787	VGLL1	Q99990	258 aa		4.83	□□□□□ -1.64
MARK3-215	ENST00000558787	C20orf144	Q9BQM9	153 aa		4.83	□□□□□ -1.64
MARK3-215	ENST00000558787	FAM30A	Q9NZY2	134 aa		4.83	□□□□□ -1.64
MARK3-215	ENST00000558787	TP53TG3	Q9ULZ0	132 aa		4.83	□□□□□ -1.64
MARK3-215	ENST00000558787	PSG8	Q9UQ74	426 aa		4.83	□□□□□ -1.64
MARK3-215	ENST00000558787	LENEP	Q9Y5L5	61 aa		4.83	□□□□□ -1.64
MARK3-215	ENST00000558787	TRGV1	A0A0A0MS02	117 aa		4.82	□□□□□ -1.64
MARK3-215	ENST00000558787	TMEM218	A2RU14	115 aa		4.82	□□□□□ -1.64
MARK3-215	ENST00000558787	C7orf71	A4D174	169 aa		4.82	□□□□□ -1.64
MARK3-215	ENST00000558787	ZNF727	A8MUV8	499 aa		4.82	□□□□□ -1.64
MARK3-215	ENST00000558787		C9JCJ5	164 aa		4.82	□□□□□ -1.64
MARK3-215	ENST00000558787		C9JQL5	133 aa		4.82	□□□□□ -1.64
MARK3-215	ENST00000558787	ZNF324	O75467	553 aa	Predicted RBP	4.82	□□□□□ -1.64
MARK3-215	ENST00000558787	LTA	P01374	205 aa		4.82	□□□□□ -1.64
MARK3-215	ENST00000558787	IGHV3-53	P01767	116 aa		4.82	□□□□□ -1.64
MARK3-215	ENST00000558787	GNG4	P50150	75 aa		4.82	□□□□□ -1.64
MARK3-215	ENST00000558787	FOXI1	Q12951	378 aa		4.82	□□□□□ -1.64
MARK3-215	ENST00000558787	DAZ2	Q13117	558 aa	Known RBP	4.82	□□□□□ -1.64
MARK3-215	ENST00000558787	ZNF674	Q2M3X9	581 aa		4.82	□□□□□ -1.64
MARK3-215	ENST00000558787	PRR9	Q5T870	116 aa		4.82	□□□□□ -1.64
MARK3-215	ENST00000558787		Q86TA4	180 aa		4.82	□□□□□ -1.64
MARK3-215	ENST00000558787	C11orf72	Q8NBR9	251 aa		4.82	□□□□□ -1.64
MARK3-215	ENST00000558787	VSIG2	Q96IQ7	327 aa		4.82	□□□□□ -1.64
MARK3-215	ENST00000558787	FAM19A4	Q96LR4	140 aa		4.82	□□□□□ -1.64
MARK3-215	ENST00000558787	LINC00479	Q96M42	142 aa		4.82	□□□□□ -1.64
MARK3-215	ENST00000558787	SMIM7	Q9BQ49	75 aa		4.82	□□□□□ -1.64
MARK3-215	ENST00000558787	PYGO2	Q9BRQ0	406 aa		4.82	□□□□□ -1.64
MARK3-215	ENST00000558787	C1orf43	Q9BWL3	253 aa		4.82	□□□□□ -1.64
MARK3-215	ENST00000558787	PARL	Q9H300	379 aa		4.82	□□□□□ -1.64
MARK3-215	ENST00000558787	BIN3	Q9NQY0	253 aa		4.82	□□□□□ -1.64
MARK3-215	ENST00000558787	ZNF492	Q9P255	531 aa		4.82	□□□□□ -1.64
MARK3-215	ENST00000558787	ZFP30	Q9Y2G7	519 aa		4.82	□□□□□ -1.64
MARK3-215	ENST00000558787	LY96	Q9Y6Y9	160 aa		4.82	□□□□□ -1.64
MARK3-215	ENST00000558787	TRGV2	A0A075B6R0	118 aa		4.81	□□□□□ -1.64
MARK3-215	ENST00000558787	TRAV8-1	A0A0A6YYK1	113 aa		4.81	□□□□□ -1.64
MARK3-215	ENST00000558787	TRAV34	A0A0B4J273	112 aa		4.81	□□□□□ -1.64
MARK3-215	ENST00000558787	KLLN	B2CW77	178 aa		4.81	□□□□□ -1.64
MARK3-215	ENST00000558787	KRBOX1	C9JBD0	128 aa		4.81	□□□□□ -1.64
MARK3-215	ENST00000558787	IGLV2-11	P01706	119 aa		4.81	□□□□□ -1.64
MARK3-215	ENST00000558787	GPX1	P07203	203 aa		4.81	□□□□□ -1.64

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