RNA–Protein interactions for RNA: ENST00000558745.5

TSPAN3-205, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,340 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-205ENST00000558745 ZNF876PQ49A33 203 aa9.59□□□□□ -0.87
TSPAN3-205ENST00000558745 MLST8Q9BVC4 326 aa9.59□□□□□ -0.87
TSPAN3-205ENST00000558745 H3BVH4 76 aa9.58□□□□□ -0.88
TSPAN3-205ENST00000558745 S100A9P06702 114 aaKnown RBP9.58□□□□□ -0.88
TSPAN3-205ENST00000558745 BCL2P10415 239 aa9.58□□□□□ -0.88
TSPAN3-205ENST00000558745 S100A4P26447 101 aaKnown RBP9.58□□□□□ -0.88
TSPAN3-205ENST00000558745 ZNF506Q5JVG8 444 aa9.58□□□□□ -0.88
TSPAN3-205ENST00000558745 PRR27Q6MZM9 219 aa9.58□□□□□ -0.88
TSPAN3-205ENST00000558745 PCNPQ8WW12 178 aaKnown RBP9.58□□□□□ -0.88
TSPAN3-205ENST00000558745 C11orf52Q96A22 123 aa9.58□□□□□ -0.88
TSPAN3-205ENST00000558745 JPT2Q9H910 190 aa9.58□□□□□ -0.88
TSPAN3-205ENST00000558745 MED9Q9NWA0 146 aa9.58□□□□□ -0.88
TSPAN3-205ENST00000558745 TRAV4A0A0B4J268 109 aa9.57□□□□□ -0.88
TSPAN3-205ENST00000558745 RS1O15537 224 aa9.57□□□□□ -0.88
TSPAN3-205ENST00000558745 IFNA1P01562 189 aa9.57□□□□□ -0.88
TSPAN3-205ENST00000558745 IGLV2-8P01709 118 aa9.57□□□□□ -0.88
TSPAN3-205ENST00000558745 ARMS2P0C7Q2 107 aa9.57□□□□□ -0.88
TSPAN3-205ENST00000558745 ASIPP42127 132 aa9.57□□□□□ -0.88
TSPAN3-205ENST00000558745 BLOC1S1P78537 153 aa9.57□□□□□ -0.88
TSPAN3-205ENST00000558745 MEF2BQ02080 365 aaPredicted RBP9.57□□□□□ -0.88
TSPAN3-205ENST00000558745 PRO0255Q9UI72 69 aa9.57□□□□□ -0.88
TSPAN3-205ENST00000558745 VAX2Q9UIW0 290 aa9.57□□□□□ -0.88
TSPAN3-205ENST00000558745 LOC100131303A0A0U1RQF7 123 aa9.56□□□□□ -0.88
TSPAN3-205ENST00000558745 H3BNG1 76 aa9.56□□□□□ -0.88
TSPAN3-205ENST00000558745 CCL18P55774 89 aa9.56□□□□□ -0.88
TSPAN3-205ENST00000558745 LINC01559Q495D7 138 aa9.56□□□□□ -0.88
TSPAN3-205ENST00000558745 CENPWQ5EE01 88 aa9.56□□□□□ -0.88
TSPAN3-205ENST00000558745 CFAP126Q5VTH2 177 aa9.56□□□□□ -0.88
TSPAN3-205ENST00000558745 DMRTA1Q5VZB9 504 aa9.56□□□□□ -0.88
TSPAN3-205ENST00000558745 ZNRF2Q8NHG8 242 aa9.56□□□□□ -0.88
TSPAN3-205ENST00000558745 LYPD6BQ8NI32 183 aa9.56□□□□□ -0.88
TSPAN3-205ENST00000558745 TXNDC17Q9BRA2 123 aa9.56□□□□□ -0.88
TSPAN3-205ENST00000558745 DNAH17Q9UFH2 4485 aa9.55□□□□□ -0.88
TSPAN3-205ENST00000558745 MUC21A0A0G2JKD1 596 aa9.55□□□□□ -0.88
TSPAN3-205ENST00000558745 MUC21A0A140T8X8 626 aa9.55□□□□□ -0.88
TSPAN3-205ENST00000558745 RBFOX3A6NFN3 312 aa9.55□□□□□ -0.88
TSPAN3-205ENST00000558745 MGST1P10620 155 aaKnown RBP9.55□□□□□ -0.88
TSPAN3-205ENST00000558745 GYPEP15421 78 aa9.55□□□□□ -0.88
TSPAN3-205ENST00000558745 Q6ZSN1 163 aa9.55□□□□□ -0.88
TSPAN3-205ENST00000558745 SAMD10Q9BYL1 202 aa9.55□□□□□ -0.88
TSPAN3-205ENST00000558745 IL36BQ9NZH7 164 aa9.55□□□□□ -0.88
TSPAN3-205ENST00000558745 ICOSQ9Y6W8 199 aa9.55□□□□□ -0.88
TSPAN3-205ENST00000558745 TRBV20OR9-2A0A075B6H5 130 aa9.54□□□□□ -0.88
TSPAN3-205ENST00000558745 K7EQD1 137 aa9.54□□□□□ -0.88
TSPAN3-205ENST00000558745 PDE6DO43924 150 aa9.54□□□□□ -0.88
TSPAN3-205ENST00000558745 GATA1P15976 413 aaPredicted RBP9.54□□□□□ -0.88
TSPAN3-205ENST00000558745 SSTP61278 116 aa9.54□□□□□ -0.88
TSPAN3-205ENST00000558745 SLAQ13239 276 aa9.54□□□□□ -0.88
TSPAN3-205ENST00000558745 DNLZQ5SXM8 178 aa9.54□□□□□ -0.88
TSPAN3-205ENST00000558745 PTH2Q96A98 100 aa9.54□□□□□ -0.88
TSPAN3-205ENST00000558745 GZMBP10144 247 aa9.53□□□□□ -0.88
TSPAN3-205ENST00000558745 GNG4P50150 75 aa9.53□□□□□ -0.88
TSPAN3-205ENST00000558745 LYPD5Q6UWN5 251 aa9.53□□□□□ -0.88
TSPAN3-205ENST00000558745 Q6ZR54 194 aa9.53□□□□□ -0.88
TSPAN3-205ENST00000558745 Q9H8V8 135 aa9.53□□□□□ -0.88
TSPAN3-205ENST00000558745 SCRT2Q9NQ03 307 aa9.53□□□□□ -0.88
TSPAN3-205ENST00000558745 M0R381 172 aa9.52□□□□□ -0.89
TSPAN3-205ENST00000558745 MRPL23Q16540 153 aaKnown RBP9.52□□□□□ -0.89
TSPAN3-205ENST00000558745 TOR2AQ5JU69 321 aa9.52□□□□□ -0.89
TSPAN3-205ENST00000558745 SLC25A29Q8N8R3 303 aa9.52□□□□□ -0.89
TSPAN3-205ENST00000558745 PARLQ9H300 379 aa9.52□□□□□ -0.89
TSPAN3-205ENST00000558745 Q9UF83 564 aa9.52□□□□□ -0.89
TSPAN3-205ENST00000558745 PHLDA3Q9Y5J5 127 aa9.52□□□□□ -0.89
TSPAN3-205ENST00000558745 FAT2Q9NYQ8 4349 aa9.51□□□□□ -0.89
TSPAN3-205ENST00000558745 KIAA1109Q2LD37 5005 aa9.51□□□□□ -0.89
TSPAN3-205ENST00000558745 A0A087WWL8 130 aa9.51□□□□□ -0.89
TSPAN3-205ENST00000558745 CEBPGP53567 150 aa9.51□□□□□ -0.89
TSPAN3-205ENST00000558745 FAM3BP58499 235 aaPredicted RBP9.51□□□□□ -0.89
TSPAN3-205ENST00000558745 OR10AG1Q8NH19 301 aa9.51□□□□□ -0.89
TSPAN3-205ENST00000558745 OCC1Q8TAD7 63 aa9.51□□□□□ -0.89
TSPAN3-205ENST00000558745 MRPS16Q9Y3D3 137 aaKnown RBP9.51□□□□□ -0.89
TSPAN3-205ENST00000558745 NBDYA0A0U1RRE5 68 aa9.5□□□□□ -0.89
TSPAN3-205ENST00000558745 C19orf71A6NCJ1 209 aa9.5□□□□□ -0.89
TSPAN3-205ENST00000558745 RTL8CO15255 209 aa9.5□□□□□ -0.89
TSPAN3-205ENST00000558745 SRIP30626 198 aa9.5□□□□□ -0.89
TSPAN3-205ENST00000558745 TAGLN2P37802 199 aaKnown RBP9.5□□□□□ -0.89
TSPAN3-205ENST00000558745 UFSP1Q6NVU6 142 aa9.5□□□□□ -0.89
TSPAN3-205ENST00000558745 TEX261Q6UWH6 196 aa9.5□□□□□ -0.89
TSPAN3-205ENST00000558745 NEGR1Q7Z3B1 354 aa9.5□□□□□ -0.89
TSPAN3-205ENST00000558745 EIF5A2Q9GZV4 153 aaKnown RBP9.5□□□□□ -0.89
TSPAN3-205ENST00000558745 A8MWV9 139 aa9.49□□□□□ -0.89
TSPAN3-205ENST00000558745 K7EN84 100 aa9.49□□□□□ -0.89
TSPAN3-205ENST00000558745 CRYGDP07320 174 aa9.49□□□□□ -0.89
TSPAN3-205ENST00000558745 FAM74A4Q5TZK3 123 aa9.49□□□□□ -0.89
TSPAN3-205ENST00000558745 C14orf178Q8N769 122 aaPredicted RBP9.49□□□□□ -0.89
TSPAN3-205ENST00000558745 SYT8Q8NBV8 401 aa9.49□□□□□ -0.89
TSPAN3-205ENST00000558745 OR2D3Q8NGH3 330 aa9.49□□□□□ -0.89
TSPAN3-205ENST00000558745 DAZAP1Q96EP5 407 aaKnown RBP9.49□□□□□ -0.89
TSPAN3-205ENST00000558745 SFRP2Q96HF1 295 aa9.49□□□□□ -0.89
TSPAN3-205ENST00000558745 KRTAP1-5Q9BYS1 174 aa9.49□□□□□ -0.89
TSPAN3-205ENST00000558745 NUDT10Q8NFP7 164 aa9.48□□□□□ -0.89
TSPAN3-205ENST00000558745 NUDT11Q96G61 164 aa9.48□□□□□ -0.89
TSPAN3-205ENST00000558745 FAM210AQ96ND0 272 aa9.48□□□□□ -0.89
TSPAN3-205ENST00000558745 UPK3BQ9BT76 320 aa9.48□□□□□ -0.89
TSPAN3-205ENST00000558745 SSBP4Q9BWG4 385 aaPredicted RBP9.48□□□□□ -0.89
TSPAN3-205ENST00000558745 RNASE7Q9H1E1 156 aaKnown RBP9.48□□□□□ -0.89
TSPAN3-205ENST00000558745 TRBV6-4A0A1B0GX49 114 aa9.47□□□□□ -0.89
TSPAN3-205ENST00000558745 SNAI2O43623 268 aa9.47□□□□□ -0.89
TSPAN3-205ENST00000558745 CIDEAO60543 219 aa9.47□□□□□ -0.89
TSPAN3-205ENST00000558745 NXPH4O95158 308 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms