RNA–Protein interactions for RNA: ENST00000558700.5

TRAF3-205, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 738 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-205ENST00000558700 IGHV3-16A0A0C4DH30 117 aa5.49□□□□□ -1.53
TRAF3-205ENST00000558700 HMGB3O15347 200 aaKnown RBP5.49□□□□□ -1.53
TRAF3-205ENST00000558700 PTTG1O95997 202 aa5.49□□□□□ -1.53
TRAF3-205ENST00000558700 MBP02144 154 aa5.49□□□□□ -1.53
TRAF3-205ENST00000558700 TYMSP04818 313 aa5.49□□□□□ -1.53
TRAF3-205ENST00000558700 EVI2AP22794 236 aa5.49□□□□□ -1.53
TRAF3-205ENST00000558700 GNG5P63218 68 aa5.49□□□□□ -1.53
TRAF3-205ENST00000558700 ZFP69Q49AA0 526 aa5.49□□□□□ -1.53
TRAF3-205ENST00000558700 Q8N1X5 172 aa5.49□□□□□ -1.53
TRAF3-205ENST00000558700 C10orf126Q8N4M7 172 aa5.49□□□□□ -1.53
TRAF3-205ENST00000558700 NHLRC2Q8NBF2 726 aa5.49□□□□□ -1.53
TRAF3-205ENST00000558700 OR4C5Q8NGB2 326 aa5.49□□□□□ -1.53
TRAF3-205ENST00000558700 ASB13Q8WXK3 278 aa5.49□□□□□ -1.53
TRAF3-205ENST00000558700 AQP10Q96PS8 301 aa5.49□□□□□ -1.53
TRAF3-205ENST00000558700 PSMG3Q9BT73 122 aaPredicted RBP5.49□□□□□ -1.53
TRAF3-205ENST00000558700 WFDC1Q9HC57 220 aa5.49□□□□□ -1.53
TRAF3-205ENST00000558700 ALG5Q9Y673 324 aa5.49□□□□□ -1.53
TRAF3-205ENST00000558700 FBLL1A6NHQ2 334 aaKnown RBP5.48□□□□□ -1.53
TRAF3-205ENST00000558700 STAG3L2P0CL84 134 aa5.48□□□□□ -1.53
TRAF3-205ENST00000558700 STAG3L3P0CL85 134 aa5.48□□□□□ -1.53
TRAF3-205ENST00000558700 DNAH10OSP0CZ25 163 aa5.48□□□□□ -1.53
TRAF3-205ENST00000558700 GATA1P15976 413 aaPredicted RBP5.48□□□□□ -1.53
TRAF3-205ENST00000558700 PPT1P50897 306 aa5.48□□□□□ -1.53
TRAF3-205ENST00000558700 WFDC10BQ8IUB3 73 aa5.48□□□□□ -1.53
TRAF3-205ENST00000558700 KRTAP4-5Q9BYR2 181 aa5.48□□□□□ -1.53
TRAF3-205ENST00000558700 MED28Q9H204 178 aa5.48□□□□□ -1.53
TRAF3-205ENST00000558700 BATF3Q9NR55 127 aa5.48□□□□□ -1.53
TRAF3-205ENST00000558700 TMEM167BQ9NRX6 74 aa5.48□□□□□ -1.53
TRAF3-205ENST00000558700 MSRB1Q9NZV6 116 aa5.48□□□□□ -1.53
TRAF3-205ENST00000558700 GNRH2O43555 120 aa5.47□□□□□ -1.53
TRAF3-205ENST00000558700 CIDEAO60543 219 aa5.47□□□□□ -1.53
TRAF3-205ENST00000558700 CXorf1O96002 111 aa5.47□□□□□ -1.53
TRAF3-205ENST00000558700 TCRAP04437 139 aa5.47□□□□□ -1.53
TRAF3-205ENST00000558700 PFN1P07737 140 aaKnown RBP5.47□□□□□ -1.53
TRAF3-205ENST00000558700 GIPP09681 153 aaPredicted RBP5.47□□□□□ -1.53
TRAF3-205ENST00000558700 ATP6V0CP27449 155 aa5.47□□□□□ -1.53
TRAF3-205ENST00000558700 GCHFRP30047 84 aa5.47□□□□□ -1.53
TRAF3-205ENST00000558700 SERF2P84101 59 aa5.47□□□□□ -1.53
TRAF3-205ENST00000558700 RHOHQ15669 191 aa5.47□□□□□ -1.53
TRAF3-205ENST00000558700 CYB561D1Q8N8Q1 229 aa5.47□□□□□ -1.53
TRAF3-205ENST00000558700 TVP23CQ96ET8 276 aa5.47□□□□□ -1.53
TRAF3-205ENST00000558700 PRADC1Q9BSG0 188 aa5.47□□□□□ -1.53
TRAF3-205ENST00000558700 HSPG2P98160 4391 aa5.46□□□□□ -1.54
TRAF3-205ENST00000558700 A0A087WTM6 91 aa5.46□□□□□ -1.54
TRAF3-205ENST00000558700 LOC100131303A0A0U1RQF7 123 aa5.46□□□□□ -1.54
TRAF3-205ENST00000558700 GGTLC3B5MD39 225 aa5.46□□□□□ -1.54
TRAF3-205ENST00000558700 TAAR5O14804 337 aa5.46□□□□□ -1.54
TRAF3-205ENST00000558700 GCGP01275 180 aa5.46□□□□□ -1.54
TRAF3-205ENST00000558700 CRYGDP07320 174 aa5.46□□□□□ -1.54
TRAF3-205ENST00000558700 FLI1Q01543 452 aaPredicted RBP5.46□□□□□ -1.54
TRAF3-205ENST00000558700 ZNF674Q2M3X9 581 aa5.46□□□□□ -1.54
TRAF3-205ENST00000558700 ZNF876PQ49A33 203 aa5.46□□□□□ -1.54
TRAF3-205ENST00000558700 SMUG1Q53HV7 270 aa5.46□□□□□ -1.54
TRAF3-205ENST00000558700 TMEM75Q8N9X5 138 aa5.46□□□□□ -1.54
TRAF3-205ENST00000558700 INO80EQ8NBZ0 244 aaPredicted RBP5.46□□□□□ -1.54
TRAF3-205ENST00000558700 SUN5Q8TC36 379 aa5.46□□□□□ -1.54
TRAF3-205ENST00000558700 SGK494Q96LW2 274 aa5.46□□□□□ -1.54
TRAF3-205ENST00000558700 ACTR3CQ9C0K3 210 aaPredicted RBP5.46□□□□□ -1.54
TRAF3-205ENST00000558700 SH3BGRL3Q9H299 93 aa5.46□□□□□ -1.54
TRAF3-205ENST00000558700 SCRT2Q9NQ03 307 aa5.46□□□□□ -1.54
TRAF3-205ENST00000558700 TNFSF18Q9UNG2 199 aa5.46□□□□□ -1.54
TRAF3-205ENST00000558700 PSG8Q9UQ74 426 aa5.46□□□□□ -1.54
TRAF3-205ENST00000558700 LRP1BQ9NZR2 4599 aa5.45□□□□□ -1.54
TRAF3-205ENST00000558700 FXYD6-FXYD2A0A087WZ82 144 aa5.45□□□□□ -1.54
TRAF3-205ENST00000558700 BORCS7-ASMTA0A0B4J1R7 106 aa5.45□□□□□ -1.54
TRAF3-205ENST00000558700 IGHV3-38A0A0C4DH36 116 aa5.45□□□□□ -1.54
TRAF3-205ENST00000558700 TRBV6-4A0A1B0GX49 114 aa5.45□□□□□ -1.54
TRAF3-205ENST00000558700 VCYO14598 125 aa5.45□□□□□ -1.54
TRAF3-205ENST00000558700 RS1O15537 224 aa5.45□□□□□ -1.54
TRAF3-205ENST00000558700 LINC01556Q5JQF7 62 aa5.45□□□□□ -1.54
TRAF3-205ENST00000558700 SAPCD1Q5SSQ6 148 aa5.45□□□□□ -1.54
TRAF3-205ENST00000558700 TMEM18Q96B42 140 aa5.45□□□□□ -1.54
TRAF3-205ENST00000558700 C9orf85Q96MD7 179 aa5.45□□□□□ -1.54
TRAF3-205ENST00000558700 TNFRSF18Q9Y5U5 241 aa5.45□□□□□ -1.54
TRAF3-205ENST00000558700 TRAV8-6A0A0B4J262 113 aa5.44□□□□□ -1.54
TRAF3-205ENST00000558700 A0A1W2PRE2 83 aa5.44□□□□□ -1.54
TRAF3-205ENST00000558700 PSCAO43653 123 aa5.44□□□□□ -1.54
TRAF3-205ENST00000558700 IGLV2-11P01706 119 aa5.44□□□□□ -1.54
TRAF3-205ENST00000558700 MGST1P10620 155 aaKnown RBP5.44□□□□□ -1.54
TRAF3-205ENST00000558700 S100A4P26447 101 aaKnown RBP5.44□□□□□ -1.54
TRAF3-205ENST00000558700 ASIPP42127 132 aa5.44□□□□□ -1.54
TRAF3-205ENST00000558700 ZNF80P51504 273 aaPredicted RBP5.44□□□□□ -1.54
TRAF3-205ENST00000558700 OR10J3Q5JRS4 329 aa5.44□□□□□ -1.54
TRAF3-205ENST00000558700 ZNF506Q5JVG8 444 aa5.44□□□□□ -1.54
TRAF3-205ENST00000558700 CFAP126Q5VTH2 177 aa5.44□□□□□ -1.54
TRAF3-205ENST00000558700 PRNTQ86SH4 94 aa5.44□□□□□ -1.54
TRAF3-205ENST00000558700 Q86TA4 180 aa5.44□□□□□ -1.54
TRAF3-205ENST00000558700 SLC25A29Q8N8R3 303 aa5.44□□□□□ -1.54
TRAF3-205ENST00000558700 PTH2Q96A98 100 aa5.44□□□□□ -1.54
TRAF3-205ENST00000558700 C11orf21Q9P2W6 132 aa5.44□□□□□ -1.54
TRAF3-205ENST00000558700 EPDR1Q9UM22 224 aa5.44□□□□□ -1.54
TRAF3-205ENST00000558700 IGHV3-73A0A0B4J1V6 119 aa5.43□□□□□ -1.54
TRAF3-205ENST00000558700 CTXND1A0A1B0GTU2 59 aa5.43□□□□□ -1.54
TRAF3-205ENST00000558700 RNF222A6NCQ9 220 aa5.43□□□□□ -1.54
TRAF3-205ENST00000558700 A8MWV9 139 aa5.43□□□□□ -1.54
TRAF3-205ENST00000558700 EPM2AB3EWF7 344 aa5.43□□□□□ -1.54
TRAF3-205ENST00000558700 IFNA7P01567 189 aa5.43□□□□□ -1.54
TRAF3-205ENST00000558700 PIK3CD-AS1Q5SR53 167 aa5.43□□□□□ -1.54
TRAF3-205ENST00000558700 AKR1C8PQ5T2L2 129 aa5.43□□□□□ -1.54
TRAF3-205ENST00000558700 LELP1Q5T871 98 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms