RNA–Protein interactions for RNA: ENST00000558439.5

AP4E1-202, Transcript of adaptor related protein complex 4 subunit epsilon 1, humanhuman

TSL 1 (best)

Gene AP4E1, Length 4,165 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1-202ENST00000558439 OR5A1Q8NGJ0 315 aa11.88□□□□□ -0.51
AP4E1-202ENST00000558439 MRAP2Q96G30 205 aa11.88□□□□□ -0.51
AP4E1-202ENST00000558439 TP53TG1Q9Y2A0 90 aa11.88□□□□□ -0.51
AP4E1-202ENST00000558439 RAX2Q96IS3 184 aa11.88□□□□□ -0.51
AP4E1-202ENST00000558439 CIDEAO60543 219 aa11.88□□□□□ -0.51
AP4E1-202ENST00000558439 ZNF48Q96MX3 618 aaPredicted RBP11.87□□□□□ -0.51
AP4E1-202ENST00000558439 ABCA12Q86UK0 2595 aa11.87□□□□□ -0.51
AP4E1-202ENST00000558439 MUC3AQ02505 3323 aa11.87□□□□□ -0.51
AP4E1-202ENST00000558439 K7EP13 123 aa11.87□□□□□ -0.51
AP4E1-202ENST00000558439 IGHV4-59P01825 116 aa11.87□□□□□ -0.51
AP4E1-202ENST00000558439 SLC25A16P16260 332 aa11.87□□□□□ -0.51
AP4E1-202ENST00000558439 AJUBAQ96IF1 538 aa11.87□□□□□ -0.51
AP4E1-202ENST00000558439 RBAKDNA6NC62 111 aa11.86□□□□□ -0.51
AP4E1-202ENST00000558439 RNF223E7ERA6 249 aa11.86□□□□□ -0.51
AP4E1-202ENST00000558439 VCYO14598 125 aa11.86□□□□□ -0.51
AP4E1-202ENST00000558439 TRBV25-1A0A075B6N4 114 aa11.86□□□□□ -0.51
AP4E1-202ENST00000558439 IGHV7-4-1A0A0J9YVY3 117 aa11.86□□□□□ -0.51
AP4E1-202ENST00000558439 PAX2Q02962 417 aa11.86□□□□□ -0.51
AP4E1-202ENST00000558439 Q6ZQT7 251 aa11.86□□□□□ -0.51
AP4E1-202ENST00000558439 IGKV3OR2-268A0A0C4DH90 116 aa11.86□□□□□ -0.51
AP4E1-202ENST00000558439 A0A1W2PPR1 153 aa11.86□□□□□ -0.51
AP4E1-202ENST00000558439 C11orf71Q6IPW1 123 aa11.86□□□□□ -0.51
AP4E1-202ENST00000558439 AMTNQ6UX39 209 aa11.86□□□□□ -0.51
AP4E1-202ENST00000558439 GEMIN7Q9H840 131 aaKnown RBP11.86□□□□□ -0.51
AP4E1-202ENST00000558439 TRAV2A0A0B4J234 112 aa11.86□□□□□ -0.51
AP4E1-202ENST00000558439 IGLC6P0CF74 106 aa11.86□□□□□ -0.51
AP4E1-202ENST00000558439 C16orf54Q6UWD8 224 aa11.86□□□□□ -0.51
AP4E1-202ENST00000558439 SDHAF1A6NFY7 115 aa11.85□□□□□ -0.51
AP4E1-202ENST00000558439 F8VRH5 84 aa11.85□□□□□ -0.51
AP4E1-202ENST00000558439 CRXO43186 299 aaPredicted RBP11.85□□□□□ -0.51
AP4E1-202ENST00000558439 CENPEQ02224 2701 aa11.84□□□□□ -0.51
AP4E1-202ENST00000558439 FXYD2P54710 66 aa11.84□□□□□ -0.51
AP4E1-202ENST00000558439 PRADC1Q9BSG0 188 aa11.84□□□□□ -0.51
AP4E1-202ENST00000558439 ZFAND3Q9H8U3 227 aa11.84□□□□□ -0.51
AP4E1-202ENST00000558439 DEFB131AP59861 70 aa11.84□□□□□ -0.51
AP4E1-202ENST00000558439 PGPEP1Q9NXJ5 209 aa11.84□□□□□ -0.51
AP4E1-202ENST00000558439 BOD1L2Q8IYS8 172 aa11.84□□□□□ -0.51
AP4E1-202ENST00000558439 A0A087WX48 190 aa11.83□□□□□ -0.52
AP4E1-202ENST00000558439 DUSP14O95147 198 aaKnown RBP11.83□□□□□ -0.52
AP4E1-202ENST00000558439 ODF1Q14990 250 aa11.83□□□□□ -0.52
AP4E1-202ENST00000558439 DEFB112Q30KQ8 113 aa11.83□□□□□ -0.52
AP4E1-202ENST00000558439 TNRC18O15417 2968 aaPredicted RBP11.83□□□□□ -0.52
AP4E1-202ENST00000558439 A0A0U1RRA0 63 aa11.83□□□□□ -0.52
AP4E1-202ENST00000558439 A0A1W2PPM0 123 aa11.83□□□□□ -0.52
AP4E1-202ENST00000558439 MRPS12O15235 138 aaKnown RBP11.83□□□□□ -0.52
AP4E1-202ENST00000558439 SAP30O75446 220 aa11.83□□□□□ -0.52
AP4E1-202ENST00000558439 GAGE13Q4V321 117 aa11.83□□□□□ -0.52
AP4E1-202ENST00000558439 PRSS29PA6NIE9 313 aa11.83□□□□□ -0.52
AP4E1-202ENST00000558439 PAPPA-AS1Q5QFB9 102 aa11.83□□□□□ -0.52
AP4E1-202ENST00000558439 JPT2Q9H910 190 aa11.83□□□□□ -0.52
AP4E1-202ENST00000558439 F8W735 103 aaPredicted RBP11.82□□□□□ -0.52
AP4E1-202ENST00000558439 CD28P10747 220 aa11.82□□□□□ -0.52
AP4E1-202ENST00000558439 EBI3Q14213 229 aa11.82□□□□□ -0.52
AP4E1-202ENST00000558439 C11orf21Q9P2W6 132 aa11.82□□□□□ -0.52
AP4E1-202ENST00000558439 PKD1L2Q7Z442 2459 aa11.82□□□□□ -0.52
AP4E1-202ENST00000558439 NDUFS8O00217 210 aa11.82□□□□□ -0.52
AP4E1-202ENST00000558439 SAMD13Q5VXD3 122 aa11.82□□□□□ -0.52
AP4E1-202ENST00000558439 ADAMTSL5Q6ZMM2 481 aa11.82□□□□□ -0.52
AP4E1-202ENST00000558439 C9orf47Q6ZRZ4 202 aa11.82□□□□□ -0.52
AP4E1-202ENST00000558439 K7EP34 96 aa11.82□□□□□ -0.52
AP4E1-202ENST00000558439 NPC2P61916 151 aa11.82□□□□□ -0.52
AP4E1-202ENST00000558439 Q8N6K4 173 aa11.82□□□□□ -0.52
AP4E1-202ENST00000558439 ETDBQ3ZM63 59 aa11.81□□□□□ -0.52
AP4E1-202ENST00000558439 HLA-DRB4P13762 266 aa11.81□□□□□ -0.52
AP4E1-202ENST00000558439 SMAGPQ0VAQ4 97 aa11.81□□□□□ -0.52
AP4E1-202ENST00000558439 HLA-DRB4X5D2U9 266 aa11.81□□□□□ -0.52
AP4E1-202ENST00000558439 H3BMG7 143 aa11.81□□□□□ -0.52
AP4E1-202ENST00000558439 MRPL53Q96EL3 112 aaKnown RBP11.81□□□□□ -0.52
AP4E1-202ENST00000558439 MTORP42345 2549 aa11.81□□□□□ -0.52
AP4E1-202ENST00000558439 CFAP47Q6ZTR5 3102 aa11.8□□□□□ -0.52
AP4E1-202ENST00000558439 DEFB136Q30KP8 78 aa11.8□□□□□ -0.52
AP4E1-202ENST00000558439 CEND1Q8N111 149 aa11.8□□□□□ -0.52
AP4E1-202ENST00000558439 RNF185Q96GF1 192 aa11.8□□□□□ -0.52
AP4E1-202ENST00000558439 C20orf173Q96LM9 149 aa11.8□□□□□ -0.52
AP4E1-202ENST00000558439 DMXL2Q8TDJ6 3036 aa11.8□□□□□ -0.52
AP4E1-202ENST00000558439 IGKV2D-26A0A0A0MRZ7 120 aa11.8□□□□□ -0.52
AP4E1-202ENST00000558439 MYMXA0A1B0GTQ4 84 aa11.8□□□□□ -0.52
AP4E1-202ENST00000558439 LINC01356Q8N9X3 169 aa11.8□□□□□ -0.52
AP4E1-202ENST00000558439 KLHL30-AS1Q8NEE0 82 aa11.8□□□□□ -0.52
AP4E1-202ENST00000558439 PHLDA1Q8WV24 401 aaPredicted RBP11.8□□□□□ -0.52
AP4E1-202ENST00000558439 SPXQ9BT56 116 aa11.8□□□□□ -0.52
AP4E1-202ENST00000558439 SIVA1O15304 175 aa11.79□□□□□ -0.52
AP4E1-202ENST00000558439 C10orf105Q8TEF2 133 aa11.79□□□□□ -0.52
AP4E1-202ENST00000558439 UBE2E2Q96LR5 201 aa11.79□□□□□ -0.52
AP4E1-202ENST00000558439 GTSF1LQ9H1H1 148 aa11.79□□□□□ -0.52
AP4E1-202ENST00000558439 TCTEX1D4Q5JR98 221 aa11.79□□□□□ -0.52
AP4E1-202ENST00000558439 HIVEP2P31629 2446 aa11.79□□□□□ -0.52
AP4E1-202ENST00000558439 TRGV11A0A075B6L2 103 aa11.79□□□□□ -0.52
AP4E1-202ENST00000558439 TRAV8-2A0A0B4J237 113 aa11.79□□□□□ -0.52
AP4E1-202ENST00000558439 LINC01549A6NIU2 74 aa11.79□□□□□ -0.52
AP4E1-202ENST00000558439 LENEPQ9Y5L5 61 aa11.79□□□□□ -0.52
AP4E1-202ENST00000558439 IGHV3-16A0A0C4DH30 117 aa11.78□□□□□ -0.52
AP4E1-202ENST00000558439 RPL39P62891 51 aaKnown RBP11.78□□□□□ -0.52
AP4E1-202ENST00000558439 CDKN1BP46527 198 aa11.78□□□□□ -0.52
AP4E1-202ENST00000558439 C20orf78Q9BR46 151 aa11.78□□□□□ -0.52
AP4E1-202ENST00000558439 IGHV1OR15-1A0A075B7D0 117 aa11.77□□□□□ -0.52
AP4E1-202ENST00000558439 IGHV3-53P01767 116 aa11.77□□□□□ -0.52
AP4E1-202ENST00000558439 PRB1P04280 392 aa11.77□□□□□ -0.52
AP4E1-202ENST00000558439 RNASE13Q5GAN3 156 aaKnown RBP11.77□□□□□ -0.52
AP4E1-202ENST00000558439 PMVKQ15126 192 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms