RNA–Protein interactions for RNA: ENST00000558335.5

GABPB1-207, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 406 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-207ENST00000558335 TRAV12-1A0A0B4J245 112 aa4.24□□□□□ -1.73
GABPB1-207ENST00000558335 H7C1H1 209 aa4.24□□□□□ -1.73
GABPB1-207ENST00000558335 J3QQQ9 107 aa4.24□□□□□ -1.73
GABPB1-207ENST00000558335 CCL21O00585 134 aa4.24□□□□□ -1.73
GABPB1-207ENST00000558335 PRSS1P07477 247 aa4.24□□□□□ -1.73
GABPB1-207ENST00000558335 CTSGP08311 255 aa4.24□□□□□ -1.73
GABPB1-207ENST00000558335 CD7P09564 240 aa4.24□□□□□ -1.73
GABPB1-207ENST00000558335 PFN2P35080 140 aa4.24□□□□□ -1.73
GABPB1-207ENST00000558335 PSMB2P49721 201 aa4.24□□□□□ -1.73
GABPB1-207ENST00000558335 FHL3Q13643 280 aa4.24□□□□□ -1.73
GABPB1-207ENST00000558335 LAGE3Q14657 143 aa4.24□□□□□ -1.73
GABPB1-207ENST00000558335 C9orf47Q6ZRZ4 202 aa4.24□□□□□ -1.73
GABPB1-207ENST00000558335 C22orf34Q6ZV56 151 aa4.24□□□□□ -1.73
GABPB1-207ENST00000558335 Q8NA96 180 aa4.24□□□□□ -1.73
GABPB1-207ENST00000558335 HIST1H4GQ99525 98 aa4.24□□□□□ -1.73
GABPB1-207ENST00000558335 ZMAT4Q9H898 229 aa4.24□□□□□ -1.73
GABPB1-207ENST00000558335 SERP1Q9Y6X1 66 aa4.24□□□□□ -1.73
GABPB1-207ENST00000558335 MALRD1Q5VYJ5 2156 aa4.23□□□□□ -1.73
GABPB1-207ENST00000558335 TRBV25-1A0A075B6N4 114 aa4.23□□□□□ -1.73
GABPB1-207ENST00000558335 TRAV21A0A0B4J279 112 aa4.23□□□□□ -1.73
GABPB1-207ENST00000558335 H3BTX0 84 aa4.23□□□□□ -1.73
GABPB1-207ENST00000558335 M0R381 172 aa4.23□□□□□ -1.73
GABPB1-207ENST00000558335 LGALS9O00182 355 aa4.23□□□□□ -1.73
GABPB1-207ENST00000558335 BUB3O43684 328 aa4.23□□□□□ -1.73
GABPB1-207ENST00000558335 SLC25A20O43772 301 aa4.23□□□□□ -1.73
GABPB1-207ENST00000558335 LORP23490 312 aaPredicted RBP4.23□□□□□ -1.73
GABPB1-207ENST00000558335 LEPP41159 167 aa4.23□□□□□ -1.73
GABPB1-207ENST00000558335 CRIP1P50238 77 aa4.23□□□□□ -1.73
GABPB1-207ENST00000558335 EFNA4P52798 201 aa4.23□□□□□ -1.73
GABPB1-207ENST00000558335 CRIP2P52943 208 aaPredicted RBP4.23□□□□□ -1.73
GABPB1-207ENST00000558335 DLX1P56177 255 aa4.23□□□□□ -1.73
GABPB1-207ENST00000558335 C4orf48Q5BLP8 95 aa4.23□□□□□ -1.73
GABPB1-207ENST00000558335 DGAT2L7PQ6IED9 249 aa4.23□□□□□ -1.73
GABPB1-207ENST00000558335 CD164L2Q6UWJ8 174 aa4.23□□□□□ -1.73
GABPB1-207ENST00000558335 GTSCR1Q86UQ5 136 aa4.23□□□□□ -1.73
GABPB1-207ENST00000558335 STHQ8IWL8 128 aa4.23□□□□□ -1.73
GABPB1-207ENST00000558335 POM121L12Q8N7R1 296 aa4.23□□□□□ -1.73
GABPB1-207ENST00000558335 USMG5Q96IX5 58 aa4.23□□□□□ -1.73
GABPB1-207ENST00000558335 ODF3Q96PU9 254 aa4.23□□□□□ -1.73
GABPB1-207ENST00000558335 CHCHD5Q9BSY4 110 aa4.23□□□□□ -1.73
GABPB1-207ENST00000558335 PLCE1Q9P212 2302 aa4.22□□□□□ -1.73
GABPB1-207ENST00000558335 IGHV1-69DA0A0B4J2H0 117 aa4.22□□□□□ -1.73
GABPB1-207ENST00000558335 LOC389332A0A1B0GUA5 103 aa4.22□□□□□ -1.73
GABPB1-207ENST00000558335 EPM2AB3EWF7 344 aa4.22□□□□□ -1.73
GABPB1-207ENST00000558335 H3BT86 120 aa4.22□□□□□ -1.73
GABPB1-207ENST00000558335 M0R3E3 92 aa4.22□□□□□ -1.73
GABPB1-207ENST00000558335 APELAP0DMC3 54 aa4.22□□□□□ -1.73
GABPB1-207ENST00000558335 EGR2P11161 476 aaPredicted RBP4.22□□□□□ -1.73
GABPB1-207ENST00000558335 HERVK_113P61574 105 aa4.22□□□□□ -1.73
GABPB1-207ENST00000558335 NPC2P61916 151 aa4.22□□□□□ -1.73
GABPB1-207ENST00000558335 PMAIP1Q13794 54 aa4.22□□□□□ -1.73
GABPB1-207ENST00000558335 C15orf32Q32M92 178 aa4.22□□□□□ -1.73
GABPB1-207ENST00000558335 SPANXN1Q5VSR9 72 aa4.22□□□□□ -1.73
GABPB1-207ENST00000558335 C11orf71Q6IPW1 123 aa4.22□□□□□ -1.73
GABPB1-207ENST00000558335 Q8N1Y9 231 aa4.22□□□□□ -1.73
GABPB1-207ENST00000558335 C8orf49Q96NF6 230 aa4.22□□□□□ -1.73
GABPB1-207ENST00000558335 ZNF580Q9UK33 172 aa4.22□□□□□ -1.73
GABPB1-207ENST00000558335 MOB4Q9Y3A3 225 aa4.22□□□□□ -1.73
GABPB1-207ENST00000558335 TIMM8BQ9Y5J9 83 aaPredicted RBP4.22□□□□□ -1.73
GABPB1-207ENST00000558335 ZGRF1Q86YA3 2104 aa4.22□□□□□ -1.73
GABPB1-207ENST00000558335 CADP27708 2225 aa4.21□□□□□ -1.74
GABPB1-207ENST00000558335 IGKV2-40A0A087WW87 121 aaPredicted RBP4.21□□□□□ -1.74
GABPB1-207ENST00000558335 TMSB15BA0A087X1C1 80 aa4.21□□□□□ -1.74
GABPB1-207ENST00000558335 IGHV7-81A0A0B4J1V7 117 aa4.21□□□□□ -1.74
GABPB1-207ENST00000558335 FAM236AA0A1B0GUQ0 79 aa4.21□□□□□ -1.74
GABPB1-207ENST00000558335 FAM236BA0A1B0GV22 79 aa4.21□□□□□ -1.74
GABPB1-207ENST00000558335 NDUFA4O00483 81 aa4.21□□□□□ -1.74
GABPB1-207ENST00000558335 BCE1O60756 84 aa4.21□□□□□ -1.74
GABPB1-207ENST00000558335 IGKV2D-40P01614 121 aaPredicted RBP4.21□□□□□ -1.74
GABPB1-207ENST00000558335 ATP5EP56381 51 aaPredicted RBP4.21□□□□□ -1.74
GABPB1-207ENST00000558335 PAX8Q06710 450 aa4.21□□□□□ -1.74
GABPB1-207ENST00000558335 ATXN8Q156A1 80 aa4.21□□□□□ -1.74
GABPB1-207ENST00000558335 LINC00173Q6ZV60 143 aa4.21□□□□□ -1.74
GABPB1-207ENST00000558335 FAM19A1Q7Z5A9 133 aa4.21□□□□□ -1.74
GABPB1-207ENST00000558335 SERP2Q8N6R1 65 aa4.21□□□□□ -1.74
GABPB1-207ENST00000558335 Q8N9W7 124 aa4.21□□□□□ -1.74
GABPB1-207ENST00000558335 LINC01560Q8TB33 94 aa4.21□□□□□ -1.74
GABPB1-207ENST00000558335 C16orf92Q96LL3 132 aa4.21□□□□□ -1.74
GABPB1-207ENST00000558335 C17orf77Q96MU5 243 aa4.21□□□□□ -1.74
GABPB1-207ENST00000558335 PSMG3-AS1Q96PY0 264 aa4.21□□□□□ -1.74
GABPB1-207ENST00000558335 DPH3P1Q9H4G8 78 aa4.21□□□□□ -1.74
GABPB1-207ENST00000558335 ZFAND3Q9H8U3 227 aa4.21□□□□□ -1.74
GABPB1-207ENST00000558335 PKIGQ9Y2B9 76 aa4.21□□□□□ -1.74
GABPB1-207ENST00000558335 ARFGEF3Q5TH69 2177 aa4.21□□□□□ -1.74
GABPB1-207ENST00000558335 NAV3Q8IVL0 2385 aa4.2□□□□□ -1.74
GABPB1-207ENST00000558335 TRGV11A0A075B6L2 103 aa4.2□□□□□ -1.74
GABPB1-207ENST00000558335 TRBV7-3A0A075B6L6 115 aa4.2□□□□□ -1.74
GABPB1-207ENST00000558335 TRAV41A0A0B4J266 112 aa4.2□□□□□ -1.74
GABPB1-207ENST00000558335 LOC107984156A0A0G2JMH3 177 aa4.2□□□□□ -1.74
GABPB1-207ENST00000558335 TRBV10-2A0A0K0K1G8 114 aa4.2□□□□□ -1.74
GABPB1-207ENST00000558335 A0A0U1RQV1 116 aa4.2□□□□□ -1.74
GABPB1-207ENST00000558335 FAM236DA0A1B0GTK5 79 aa4.2□□□□□ -1.74
GABPB1-207ENST00000558335 F8VRH5 84 aa4.2□□□□□ -1.74
GABPB1-207ENST00000558335 F8W735 103 aaPredicted RBP4.2□□□□□ -1.74
GABPB1-207ENST00000558335 H3BMM0 161 aa4.2□□□□□ -1.74
GABPB1-207ENST00000558335 OVOL3O00110 214 aa4.2□□□□□ -1.74
GABPB1-207ENST00000558335 IGHG2P01859 326 aa4.2□□□□□ -1.74
GABPB1-207ENST00000558335 FAM236CP0DP71 79 aa4.2□□□□□ -1.74
GABPB1-207ENST00000558335 S100A4P26447 101 aaKnown RBP4.2□□□□□ -1.74
GABPB1-207ENST00000558335 UBE2D1P51668 147 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms