RNA–Protein interactions for RNA: ENST00000558253.5

SPG11-209, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 879 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-209ENST00000558253 DPM2O94777 84 aa6.26□□□□□ -1.41
SPG11-209ENST00000558253 DEFB113Q30KQ7 82 aa6.26□□□□□ -1.41
SPG11-209ENST00000558253 ANXA2RQ3ZCQ2 193 aa6.26□□□□□ -1.41
SPG11-209ENST00000558253 MPV17L2Q567V2 206 aa6.26□□□□□ -1.41
SPG11-209ENST00000558253 PRR31Q5SQ13 230 aa6.26□□□□□ -1.41
SPG11-209ENST00000558253 AMMECR1LQ6DCA0 310 aa6.26□□□□□ -1.41
SPG11-209ENST00000558253 SYT8Q8NBV8 401 aa6.26□□□□□ -1.41
SPG11-209ENST00000558253 SMIM2Q9BVW6 85 aa6.26□□□□□ -1.41
SPG11-209ENST00000558253 HIGD1BQ9P298 99 aa6.26□□□□□ -1.41
SPG11-209ENST00000558253 TIMM8BQ9Y5J9 83 aaPredicted RBP6.26□□□□□ -1.41
SPG11-209ENST00000558253 A1L4Q6 167 aa6.25□□□□□ -1.41
SPG11-209ENST00000558253 C7orf71A4D174 169 aa6.25□□□□□ -1.41
SPG11-209ENST00000558253 C9orf118A6NHY6 69 aa6.25□□□□□ -1.41
SPG11-209ENST00000558253 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.25□□□□□ -1.41
SPG11-209ENST00000558253 K7EP34 96 aa6.25□□□□□ -1.41
SPG11-209ENST00000558253 K7EQG2 157 aa6.25□□□□□ -1.41
SPG11-209ENST00000558253 IGKCP01834 107 aa6.25□□□□□ -1.41
SPG11-209ENST00000558253 IGHV4-31P0DP07 118 aa6.25□□□□□ -1.41
SPG11-209ENST00000558253 SUMO2P61956 95 aaKnown RBP6.25□□□□□ -1.41
SPG11-209ENST00000558253 HSD52Q0P140 79 aa6.25□□□□□ -1.41
SPG11-209ENST00000558253 ODF1Q14990 250 aa6.25□□□□□ -1.41
SPG11-209ENST00000558253 TMEM97Q5BJF2 176 aa6.25□□□□□ -1.41
SPG11-209ENST00000558253 PRR9Q5T870 116 aa6.25□□□□□ -1.41
SPG11-209ENST00000558253 UFSP1Q6NVU6 142 aa6.25□□□□□ -1.41
SPG11-209ENST00000558253 NEGR1Q7Z3B1 354 aa6.25□□□□□ -1.41
SPG11-209ENST00000558253 ZNF843Q8N446 348 aa6.25□□□□□ -1.41
SPG11-209ENST00000558253 TMEM158Q8WZ71 300 aa6.25□□□□□ -1.41
SPG11-209ENST00000558253 COL6A6A6NMZ7 2263 aa6.25□□□□□ -1.41
SPG11-209ENST00000558253 A0A087WX48 190 aa6.24□□□□□ -1.41
SPG11-209ENST00000558253 A0A0J9YX75 114 aa6.24□□□□□ -1.41
SPG11-209ENST00000558253 H7C1H1 209 aa6.24□□□□□ -1.41
SPG11-209ENST00000558253 RNASE1P07998 156 aaKnown RBP6.24□□□□□ -1.41
SPG11-209ENST00000558253 FGF6P10767 208 aa6.24□□□□□ -1.41
SPG11-209ENST00000558253 PAPPA-AS1Q5QFB9 102 aa6.24□□□□□ -1.41
SPG11-209ENST00000558253 PIK3CD-AS1Q5SR53 167 aa6.24□□□□□ -1.41
SPG11-209ENST00000558253 FOXI2Q6ZQN5 318 aa6.24□□□□□ -1.41
SPG11-209ENST00000558253 TOMM6Q96B49 74 aa6.24□□□□□ -1.41
SPG11-209ENST00000558253 ZNF702PQ9H963 129 aa6.24□□□□□ -1.41
SPG11-209ENST00000558253 PEMTQ9UBM1 199 aa6.24□□□□□ -1.41
SPG11-209ENST00000558253 ATRXP46100 2492 aa6.24□□□□□ -1.41
SPG11-209ENST00000558253 TRGV11A0A075B6L2 103 aa6.23□□□□□ -1.41
SPG11-209ENST00000558253 KRTAP4-8A0A0G2JLE6 195 aa6.23□□□□□ -1.41
SPG11-209ENST00000558253 TRBV6-5A0A0K0K1A5 114 aa6.23□□□□□ -1.41
SPG11-209ENST00000558253 H3BS24 57 aa6.23□□□□□ -1.41
SPG11-209ENST00000558253 VCYO14598 125 aa6.23□□□□□ -1.41
SPG11-209ENST00000558253 PRB4P10163 310 aaPredicted RBP6.23□□□□□ -1.41
SPG11-209ENST00000558253 RNASE3P12724 160 aaKnown RBP6.23□□□□□ -1.41
SPG11-209ENST00000558253 TAL2Q16559 108 aa6.23□□□□□ -1.41
SPG11-209ENST00000558253 PTH2Q96A98 100 aa6.23□□□□□ -1.41
SPG11-209ENST00000558253 SIGMAR1Q99720 223 aa6.23□□□□□ -1.41
SPG11-209ENST00000558253 HHLA3Q9XRX5 114 aa6.23□□□□□ -1.41
SPG11-209ENST00000558253 SPTBN1Q01082 2364 aaKnown RBP6.23□□□□□ -1.41
SPG11-209ENST00000558253 DCHS2Q6V1P9 2916 aa6.22□□□□□ -1.41
SPG11-209ENST00000558253 A8MTW9 85 aa6.22□□□□□ -1.41
SPG11-209ENST00000558253 SCGB2A2Q13296 93 aa6.22□□□□□ -1.41
SPG11-209ENST00000558253 TCTEX1D4Q5JR98 221 aa6.22□□□□□ -1.41
SPG11-209ENST00000558253 Q5PR19 223 aa6.22□□□□□ -1.41
SPG11-209ENST00000558253 C2orf91Q6ZV80 131 aa6.22□□□□□ -1.41
SPG11-209ENST00000558253 ERASQ7Z444 233 aa6.22□□□□□ -1.41
SPG11-209ENST00000558253 C14orf178Q8N769 122 aaPredicted RBP6.22□□□□□ -1.41
SPG11-209ENST00000558253 RASL10AQ92737 203 aa6.22□□□□□ -1.41
SPG11-209ENST00000558253 TMEM141Q96I45 108 aa6.22□□□□□ -1.41
SPG11-209ENST00000558253 C9orf85Q96MD7 179 aa6.22□□□□□ -1.41
SPG11-209ENST00000558253 CLUHP3Q96NS8 147 aa6.22□□□□□ -1.41
SPG11-209ENST00000558253 SCGB3A1Q96QR1 104 aa6.22□□□□□ -1.41
SPG11-209ENST00000558253 FOXC2Q99958 501 aa6.22□□□□□ -1.41
SPG11-209ENST00000558253 KIF25-AS1Q9Y6Z4 181 aa6.22□□□□□ -1.41
SPG11-209ENST00000558253 CACNA1AO00555 2505 aa6.22□□□□□ -1.41
SPG11-209ENST00000558253 WNK2Q9Y3S1 2297 aa6.22□□□□□ -1.41
SPG11-209ENST00000558253 NBASA2RRP1 2371 aa6.21□□□□□ -1.42
SPG11-209ENST00000558253 IGHV1OR15-1A0A075B7D0 117 aa6.21□□□□□ -1.42
SPG11-209ENST00000558253 F8VRH5 84 aa6.21□□□□□ -1.42
SPG11-209ENST00000558253 LINC01619G3V211 115 aa6.21□□□□□ -1.42
SPG11-209ENST00000558253 GNRH2O43555 120 aa6.21□□□□□ -1.42
SPG11-209ENST00000558253 FABP2P12104 132 aa6.21□□□□□ -1.42
SPG11-209ENST00000558253 GATA1P15976 413 aaPredicted RBP6.21□□□□□ -1.42
SPG11-209ENST00000558253 HOXD3P31249 432 aaPredicted RBP6.21□□□□□ -1.42
SPG11-209ENST00000558253 SYNJ2BPP57105 145 aa6.21□□□□□ -1.42
SPG11-209ENST00000558253 C4orf3Q8WVX3 66 aa6.21□□□□□ -1.42
SPG11-209ENST00000558253 C18orf15Q96N68 181 aa6.21□□□□□ -1.42
SPG11-209ENST00000558253 KIR2DL4Q99706 377 aa6.21□□□□□ -1.42
SPG11-209ENST00000558253 MCRIP2Q9BUT9 160 aaKnown RBP6.21□□□□□ -1.42
SPG11-209ENST00000558253 DKK2Q9UBU2 259 aa6.21□□□□□ -1.42
SPG11-209ENST00000558253 CACNA1BQ00975 2339 aa6.21□□□□□ -1.42
SPG11-209ENST00000558253 ITPR1Q14643 2758 aa6.21□□□□□ -1.42
SPG11-209ENST00000558253 SPTBN4Q9H254 2564 aa6.2□□□□□ -1.42
SPG11-209ENST00000558253 TRAV26-2A0A0B4J265 109 aa6.2□□□□□ -1.42
SPG11-209ENST00000558253 TRAV25A0A0B4J276 109 aa6.2□□□□□ -1.42
SPG11-209ENST00000558253 IGHV3-16A0A0C4DH30 117 aa6.2□□□□□ -1.42
SPG11-209ENST00000558253 F6UB75 175 aa6.2□□□□□ -1.42
SPG11-209ENST00000558253 HOXA3O43365 443 aaPredicted RBP6.2□□□□□ -1.42
SPG11-209ENST00000558253 GAS8-AS1O95177 125 aa6.2□□□□□ -1.42
SPG11-209ENST00000558253 MGPP08493 103 aa6.2□□□□□ -1.42
SPG11-209ENST00000558253 CD7P09564 240 aa6.2□□□□□ -1.42
SPG11-209ENST00000558253 CMC4P56277 68 aaPredicted RBP6.2□□□□□ -1.42
SPG11-209ENST00000558253 ADAMTSL5Q6ZMM2 481 aa6.2□□□□□ -1.42
SPG11-209ENST00000558253 LCNL1Q6ZST4 164 aa6.2□□□□□ -1.42
SPG11-209ENST00000558253 NRGNQ92686 78 aa6.2□□□□□ -1.42
SPG11-209ENST00000558253 JMJD8Q96S16 334 aa6.2□□□□□ -1.42
SPG11-209ENST00000558253 LINC00467Q9BRT7 94 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms