RNA–Protein interactions for RNA: ENST00000557718.5

FOXN3-218, Transcript of forkhead box N3, humanhuman

TSL 5

Gene FOXN3, Length 398 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-218ENST00000557718 KIR2DL5BA0A0G2JPC4 375 aa4.27□□□□□ -1.73
FOXN3-218ENST00000557718 PLAC8L1A1L4L8 177 aa4.27□□□□□ -1.73
FOXN3-218ENST00000557718 GRIFINA4D1Z8 144 aa4.27□□□□□ -1.73
FOXN3-218ENST00000557718 FABP5P3A8MUU1 101 aa4.27□□□□□ -1.73
FOXN3-218ENST00000557718 GNRH2O43555 120 aa4.27□□□□□ -1.73
FOXN3-218ENST00000557718 SPRY2O43597 315 aa4.27□□□□□ -1.73
FOXN3-218ENST00000557718 GATCO43716 136 aaKnown RBP4.27□□□□□ -1.73
FOXN3-218ENST00000557718 INSP01308 110 aa4.27□□□□□ -1.73
FOXN3-218ENST00000557718 IGLC6P0CF74 106 aa4.27□□□□□ -1.73
FOXN3-218ENST00000557718 RNASE3P12724 160 aaKnown RBP4.27□□□□□ -1.73
FOXN3-218ENST00000557718 AZU1P20160 251 aa4.27□□□□□ -1.73
FOXN3-218ENST00000557718 TSPOP30536 169 aa4.27□□□□□ -1.73
FOXN3-218ENST00000557718 ERVFC1-1P60608 527 aa4.27□□□□□ -1.73
FOXN3-218ENST00000557718 DEFB135Q30KP9 77 aa4.27□□□□□ -1.73
FOXN3-218ENST00000557718 TDRG1Q3Y452 100 aa4.27□□□□□ -1.73
FOXN3-218ENST00000557718 KIR2DL5AQ8N109 375 aa4.27□□□□□ -1.73
FOXN3-218ENST00000557718 SVBPQ8N300 66 aa4.27□□□□□ -1.73
FOXN3-218ENST00000557718 C11orf72Q8NBR9 251 aa4.27□□□□□ -1.73
FOXN3-218ENST00000557718 OR10G8Q8NGN5 311 aa4.27□□□□□ -1.73
FOXN3-218ENST00000557718 KIR2DL5BQ8NHK3 375 aa4.27□□□□□ -1.73
FOXN3-218ENST00000557718 YPEL4Q96NS1 127 aa4.27□□□□□ -1.73
FOXN3-218ENST00000557718 CSTL1Q9H114 145 aa4.27□□□□□ -1.73
FOXN3-218ENST00000557718 RPP21Q9H633 154 aaKnown RBP4.27□□□□□ -1.73
FOXN3-218ENST00000557718 RETNQ9HD89 108 aa4.27□□□□□ -1.73
FOXN3-218ENST00000557718 CSMD3Q7Z407 3707 aa4.26□□□□□ -1.73
FOXN3-218ENST00000557718 IGHV1OR15-1A0A075B7D0 117 aa4.26□□□□□ -1.73
FOXN3-218ENST00000557718 A0A087WWC5 75 aa4.26□□□□□ -1.73
FOXN3-218ENST00000557718 IGHV3-16A0A0C4DH30 117 aa4.26□□□□□ -1.73
FOXN3-218ENST00000557718 SMIM27A0A1W2PRY6 76 aa4.26□□□□□ -1.73
FOXN3-218ENST00000557718 ZNF705GA8MUZ8 300 aaPredicted RBP4.26□□□□□ -1.73
FOXN3-218ENST00000557718 SNAPINO95295 136 aa4.26□□□□□ -1.73
FOXN3-218ENST00000557718 P01737 135 aa4.26□□□□□ -1.73
FOXN3-218ENST00000557718 AMBPP02760 352 aa4.26□□□□□ -1.73
FOXN3-218ENST00000557718 ORM1P02763 201 aa4.26□□□□□ -1.73
FOXN3-218ENST00000557718 S100A1P23297 94 aa4.26□□□□□ -1.73
FOXN3-218ENST00000557718 TCL1AP56279 114 aa4.26□□□□□ -1.73
FOXN3-218ENST00000557718 RHEBQ15382 184 aa4.26□□□□□ -1.73
FOXN3-218ENST00000557718 DNLZQ5SXM8 178 aa4.26□□□□□ -1.73
FOXN3-218ENST00000557718 CBLN2Q8IUK8 224 aa4.26□□□□□ -1.73
FOXN3-218ENST00000557718 SBSPONQ8IVN8 264 aa4.26□□□□□ -1.73
FOXN3-218ENST00000557718 OR2D3Q8NGH3 330 aa4.26□□□□□ -1.73
FOXN3-218ENST00000557718 C20orf144Q9BQM9 153 aa4.26□□□□□ -1.73
FOXN3-218ENST00000557718 LINC00467Q9BRT7 94 aa4.26□□□□□ -1.73
FOXN3-218ENST00000557718 TUBA4BQ9H853 241 aa4.26□□□□□ -1.73
FOXN3-218ENST00000557718 MDFICQ9P1T7 246 aa4.26□□□□□ -1.73
FOXN3-218ENST00000557718 ZMAT5Q9UDW3 170 aaKnown RBP4.26□□□□□ -1.73
FOXN3-218ENST00000557718 NAGKQ9UJ70 344 aa4.26□□□□□ -1.73
FOXN3-218ENST00000557718 TMA7Q9Y2S6 64 aaKnown RBP4.26□□□□□ -1.73
FOXN3-218ENST00000557718 TMEM189A5PLL7 270 aa4.25□□□□□ -1.73
FOXN3-218ENST00000557718 B4DEV8 164 aa4.25□□□□□ -1.73
FOXN3-218ENST00000557718 H3BVH4 76 aa4.25□□□□□ -1.73
FOXN3-218ENST00000557718 H7BYZ3 331 aa4.25□□□□□ -1.73
FOXN3-218ENST00000557718 SNAI2O43623 268 aa4.25□□□□□ -1.73
FOXN3-218ENST00000557718 MT-ND4LP03901 98 aa4.25□□□□□ -1.73
FOXN3-218ENST00000557718 CXCL1P09341 107 aa4.25□□□□□ -1.73
FOXN3-218ENST00000557718 CTRLP40313 264 aa4.25□□□□□ -1.73
FOXN3-218ENST00000557718 APOC4P55056 127 aa4.25□□□□□ -1.73
FOXN3-218ENST00000557718 TMEM88Q6PEY1 159 aa4.25□□□□□ -1.73
FOXN3-218ENST00000557718 RNASE8Q8TDE3 154 aaKnown RBP4.25□□□□□ -1.73
FOXN3-218ENST00000557718 TSKUQ8WUA8 353 aa4.25□□□□□ -1.73
FOXN3-218ENST00000557718 RNF183Q96D59 192 aa4.25□□□□□ -1.73
FOXN3-218ENST00000557718 C9orf85Q96MD7 179 aa4.25□□□□□ -1.73
FOXN3-218ENST00000557718 OVOL2Q9BRP0 275 aa4.25□□□□□ -1.73
FOXN3-218ENST00000557718 PYGO2Q9BRQ0 406 aa4.25□□□□□ -1.73
FOXN3-218ENST00000557718 CTDSP1Q9GZU7 261 aa4.25□□□□□ -1.73
FOXN3-218ENST00000557718 SCRT2Q9NQ03 307 aa4.25□□□□□ -1.73
FOXN3-218ENST00000557718 RPS10P5Q9NQ39 176 aa4.25□□□□□ -1.73
FOXN3-218ENST00000557718 BIN3Q9NQY0 253 aa4.25□□□□□ -1.73
FOXN3-218ENST00000557718 IL36BQ9NZH7 164 aa4.25□□□□□ -1.73
FOXN3-218ENST00000557718 PLECQ15149 4684 aaKnown RBP4.24□□□□□ -1.73
FOXN3-218ENST00000557718 IGHV3OR16-12A0A075B7B8 117 aa4.24□□□□□ -1.73
FOXN3-218ENST00000557718 MUC21A0A0G2JKD1 596 aa4.24□□□□□ -1.73
FOXN3-218ENST00000557718 MUC21A0A140T8X8 626 aa4.24□□□□□ -1.73
FOXN3-218ENST00000557718 UBE2CO00762 179 aa4.24□□□□□ -1.73
FOXN3-218ENST00000557718 NXPH4O95158 308 aa4.24□□□□□ -1.73
FOXN3-218ENST00000557718 ARMS2P0C7Q2 107 aa4.24□□□□□ -1.73
FOXN3-218ENST00000557718 FOXA3P55318 350 aaPredicted RBP4.24□□□□□ -1.73
FOXN3-218ENST00000557718 FAM3BP58499 235 aaPredicted RBP4.24□□□□□ -1.73
FOXN3-218ENST00000557718 NUTF2P61970 127 aaKnown RBP4.24□□□□□ -1.73
FOXN3-218ENST00000557718 ELOBQ15370 118 aa4.24□□□□□ -1.73
FOXN3-218ENST00000557718 FAM159AQ6UWV7 190 aa4.24□□□□□ -1.73
FOXN3-218ENST00000557718 Q6ZWC4 215 aa4.24□□□□□ -1.73
FOXN3-218ENST00000557718 TMEM256Q8N2U0 113 aa4.24□□□□□ -1.73
FOXN3-218ENST00000557718 C15orf54Q8N8G6 183 aa4.24□□□□□ -1.73
FOXN3-218ENST00000557718 Q8NAQ8 132 aa4.24□□□□□ -1.73
FOXN3-218ENST00000557718 NUP35Q8NFH5 326 aa4.24□□□□□ -1.73
FOXN3-218ENST00000557718 OR10AG1Q8NH19 301 aa4.24□□□□□ -1.73
FOXN3-218ENST00000557718 DAZAP1Q96EP5 407 aaKnown RBP4.24□□□□□ -1.73
FOXN3-218ENST00000557718 LINC01587Q99440 93 aa4.24□□□□□ -1.73
FOXN3-218ENST00000557718 TM2D3Q9BRN9 247 aa4.24□□□□□ -1.73
FOXN3-218ENST00000557718 C1orf43Q9BWL3 253 aa4.24□□□□□ -1.73
FOXN3-218ENST00000557718 C1QTNF4Q9BXJ3 329 aa4.24□□□□□ -1.73
FOXN3-218ENST00000557718 TMEM242Q9NWH2 141 aa4.24□□□□□ -1.73
FOXN3-218ENST00000557718 GOLT1BQ9Y3E0 138 aa4.24□□□□□ -1.73
FOXN3-218ENST00000557718 STARD9Q9P2P6 4700 aa4.24□□□□□ -1.73
FOXN3-218ENST00000557718 IGHV4-28A0A0C4DH34 117 aa4.23□□□□□ -1.73
FOXN3-218ENST00000557718 A0A1B0GXF2 115 aa4.23□□□□□ -1.73
FOXN3-218ENST00000557718 CBY3A6NI87 242 aa4.23□□□□□ -1.73
FOXN3-218ENST00000557718 HIGD1CA8MV81 97 aa4.23□□□□□ -1.73
FOXN3-218ENST00000557718 A8MWL6 223 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms