RNA–Protein interactions for RNA: ENST00000557673.5

NEK9-211, Transcript of NIMA related kinase 9, humanhuman

TSL 3

Gene NEK9, Length 657 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-211ENST00000557673 Q6ZTI0 123 aa11.63□□□□□ -0.55
NEK9-211ENST00000557673 IGKV3D-20A0A0C4DH25 116 aa11.62□□□□□ -0.55
NEK9-211ENST00000557673 C9JCJ5 164 aa11.62□□□□□ -0.55
NEK9-211ENST00000557673 GNRH2O43555 120 aa11.62□□□□□ -0.55
NEK9-211ENST00000557673 SPINK4O60575 86 aa11.62□□□□□ -0.55
NEK9-211ENST00000557673 LINC01559Q495D7 138 aa11.62□□□□□ -0.55
NEK9-211ENST00000557673 GAGE12BA1L429 117 aa11.61□□□□□ -0.55
NEK9-211ENST00000557673 PGPEP1LA6NFU8 196 aa11.61□□□□□ -0.55
NEK9-211ENST00000557673 F5H768 121 aa11.61□□□□□ -0.55
NEK9-211ENST00000557673 M0R036 132 aa11.61□□□□□ -0.55
NEK9-211ENST00000557673 GAGE7O76087 117 aa11.61□□□□□ -0.55
NEK9-211ENST00000557673 SRP19P09132 144 aaKnown RBP11.61□□□□□ -0.55
NEK9-211ENST00000557673 GAGE12FP0CL80 117 aa11.61□□□□□ -0.55
NEK9-211ENST00000557673 GAGE12GP0CL81 117 aa11.61□□□□□ -0.55
NEK9-211ENST00000557673 GAGE12IP0CL82 117 aa11.61□□□□□ -0.55
NEK9-211ENST00000557673 TNP2Q05952 138 aa11.61□□□□□ -0.55
NEK9-211ENST00000557673 PRR27Q6MZM9 219 aa11.61□□□□□ -0.55
NEK9-211ENST00000557673 C6orf223Q8N319 242 aa11.61□□□□□ -0.55
NEK9-211ENST00000557673 MAPKAPK5-AS1Q8N8E1 139 aa11.61□□□□□ -0.55
NEK9-211ENST00000557673 NACAE9PAV3 2078 aa11.61□□□□□ -0.55
NEK9-211ENST00000557673 TRGV1A0A0A0MS02 117 aa11.6□□□□□ -0.55
NEK9-211ENST00000557673 NBDYA0A0U1RRE5 68 aa11.6□□□□□ -0.55
NEK9-211ENST00000557673 B4DEV8 164 aa11.6□□□□□ -0.55
NEK9-211ENST00000557673 KRBOX1C9JBD0 128 aa11.6□□□□□ -0.55
NEK9-211ENST00000557673 ORM1P02763 201 aa11.6□□□□□ -0.55
NEK9-211ENST00000557673 ATP5G1P05496 136 aa11.6□□□□□ -0.55
NEK9-211ENST00000557673 MGST1P10620 155 aaKnown RBP11.6□□□□□ -0.55
NEK9-211ENST00000557673 CEBPGP53567 150 aa11.6□□□□□ -0.55
NEK9-211ENST00000557673 CCL18P55774 89 aa11.6□□□□□ -0.55
NEK9-211ENST00000557673 RAB14P61106 215 aa11.6□□□□□ -0.55
NEK9-211ENST00000557673 CLLU1Q5K131 121 aa11.6□□□□□ -0.55
NEK9-211ENST00000557673 C9orf85Q96MD7 179 aa11.6□□□□□ -0.55
NEK9-211ENST00000557673 SPXQ9BT56 116 aa11.6□□□□□ -0.55
NEK9-211ENST00000557673 MRPL16Q9NX20 251 aaKnown RBP11.6□□□□□ -0.55
NEK9-211ENST00000557673 RNASE3P12724 160 aaKnown RBP11.59□□□□□ -0.55
NEK9-211ENST00000557673 C18orf15Q96N68 181 aa11.59□□□□□ -0.55
NEK9-211ENST00000557673 NUDT3O95989 172 aa11.58□□□□□ -0.56
NEK9-211ENST00000557673 ASIPP42127 132 aa11.58□□□□□ -0.56
NEK9-211ENST00000557673 SRSF3P84103 164 aaKnown RBP11.58□□□□□ -0.56
NEK9-211ENST00000557673 DNLZQ5SXM8 178 aa11.58□□□□□ -0.56
NEK9-211ENST00000557673 ZNRF2Q8NHG8 242 aa11.58□□□□□ -0.56
NEK9-211ENST00000557673 SMIM7Q9BQ49 75 aa11.58□□□□□ -0.56
NEK9-211ENST00000557673 TMSB15BA0A087X1C1 80 aa11.57□□□□□ -0.56
NEK9-211ENST00000557673 C19orf71A6NCJ1 209 aa11.57□□□□□ -0.56
NEK9-211ENST00000557673 C9JQL5 133 aa11.57□□□□□ -0.56
NEK9-211ENST00000557673 H3BVH4 76 aa11.57□□□□□ -0.56
NEK9-211ENST00000557673 K7EN84 100 aa11.57□□□□□ -0.56
NEK9-211ENST00000557673 M0R2P5 195 aa11.57□□□□□ -0.56
NEK9-211ENST00000557673 CXCL1P09341 107 aa11.57□□□□□ -0.56
NEK9-211ENST00000557673 RPL19P84098 196 aaKnown RBP11.57□□□□□ -0.56
NEK9-211ENST00000557673 PEA15Q15121 130 aa11.57□□□□□ -0.56
NEK9-211ENST00000557673 SMDT1Q9H4I9 107 aa11.57□□□□□ -0.56
NEK9-211ENST00000557673 HSPG2P98160 4391 aa11.57□□□□□ -0.56
NEK9-211ENST00000557673 TRGV2A0A075B6R0 118 aa11.56□□□□□ -0.56
NEK9-211ENST00000557673 OR5I1Q13606 314 aa11.56□□□□□ -0.56
NEK9-211ENST00000557673 RASL10AQ92737 203 aa11.56□□□□□ -0.56
NEK9-211ENST00000557673 BIN3Q9NQY0 253 aa11.56□□□□□ -0.56
NEK9-211ENST00000557673 IL36BQ9NZH7 164 aa11.56□□□□□ -0.56
NEK9-211ENST00000557673 GRIFINA4D1Z8 144 aa11.55□□□□□ -0.56
NEK9-211ENST00000557673 S100A4P26447 101 aaKnown RBP11.55□□□□□ -0.56
NEK9-211ENST00000557673 Q8N1X5 172 aa11.55□□□□□ -0.56
NEK9-211ENST00000557673 LY96Q9Y6Y9 160 aa11.55□□□□□ -0.56
NEK9-211ENST00000557673 ZNF727A8MUV8 499 aa11.54□□□□□ -0.56
NEK9-211ENST00000557673 OCC1Q8TAD7 63 aa11.54□□□□□ -0.56
NEK9-211ENST00000557673 HOXA5P20719 270 aa11.53□□□□□ -0.56
NEK9-211ENST00000557673 LINC01551Q86U37 167 aa11.53□□□□□ -0.56
NEK9-211ENST00000557673 PTH2Q96A98 100 aa11.53□□□□□ -0.56
NEK9-211ENST00000557673 SCRT2Q9NQ03 307 aa11.53□□□□□ -0.56
NEK9-211ENST00000557673 TRAV26-1A0A087WT03 109 aa11.52□□□□□ -0.57
NEK9-211ENST00000557673 P01737 135 aa11.52□□□□□ -0.57
NEK9-211ENST00000557673 ARMS2P0C7Q2 107 aa11.52□□□□□ -0.57
NEK9-211ENST00000557673 ZNF876PQ49A33 203 aa11.52□□□□□ -0.57
NEK9-211ENST00000557673 FAM74A3Q4VXF1 159 aa11.52□□□□□ -0.57
NEK9-211ENST00000557673 TTC32Q5I0X7 151 aa11.52□□□□□ -0.57
NEK9-211ENST00000557673 OR2D3Q8NGH3 330 aa11.52□□□□□ -0.57
NEK9-211ENST00000557673 DAZAP1Q96EP5 407 aaKnown RBP11.52□□□□□ -0.57
NEK9-211ENST00000557673 LINC00588Q9Y4M8 146 aa11.52□□□□□ -0.57
NEK9-211ENST00000557673 TRAV4A0A0B4J268 109 aa11.51□□□□□ -0.57
NEK9-211ENST00000557673 A0A0J9YY99 117 aa11.51□□□□□ -0.57
NEK9-211ENST00000557673 IGHV3-53P01767 116 aa11.51□□□□□ -0.57
NEK9-211ENST00000557673 PIK3CD-AS1Q5SR53 167 aa11.51□□□□□ -0.57
NEK9-211ENST00000557673 SPATA12Q7Z6I5 190 aa11.51□□□□□ -0.57
NEK9-211ENST00000557673 RNASE7Q9H1E1 156 aaKnown RBP11.51□□□□□ -0.57
NEK9-211ENST00000557673 Q9H8V8 135 aa11.51□□□□□ -0.57
NEK9-211ENST00000557673 SNAI2O43623 268 aa11.5□□□□□ -0.57
NEK9-211ENST00000557673 NXPH4O95158 308 aa11.5□□□□□ -0.57
NEK9-211ENST00000557673 SFTA3P0C7M3 94 aa11.5□□□□□ -0.57
NEK9-211ENST00000557673 RPS20P60866 119 aaKnown RBP11.5□□□□□ -0.57
NEK9-211ENST00000557673 NUDT10Q8NFP7 164 aa11.5□□□□□ -0.57
NEK9-211ENST00000557673 NUDT11Q96G61 164 aa11.5□□□□□ -0.57
NEK9-211ENST00000557673 RPP21Q9H633 154 aaKnown RBP11.5□□□□□ -0.57
NEK9-211ENST00000557673 LRP1BQ9NZR2 4599 aa11.5□□□□□ -0.57
NEK9-211ENST00000557673 OR5AL1P0C617 328 aa11.49□□□□□ -0.57
NEK9-211ENST00000557673 IGLC6P0CF74 106 aa11.49□□□□□ -0.57
NEK9-211ENST00000557673 GZMBP10144 247 aa11.49□□□□□ -0.57
NEK9-211ENST00000557673 FAM231DQ6ZW35 169 aa11.49□□□□□ -0.57
NEK9-211ENST00000557673 ZNF479Q96JC4 524 aa11.49□□□□□ -0.57
NEK9-211ENST00000557673 PHLDA3Q9Y5J5 127 aa11.49□□□□□ -0.57
NEK9-211ENST00000557673 XKRY2A2RUG3 117 aa11.48□□□□□ -0.57
NEK9-211ENST00000557673 RS1O15537 224 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms