RNA–Protein interactions for RNA: ENST00000557626.5

TMEM260-215, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 1,262 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-215ENST00000557626 SPINK13Q1W4C9 94 aa8.91□□□□□ -0.98
TMEM260-215ENST00000557626 Q6ZSA8 131 aa8.91□□□□□ -0.98
TMEM260-215ENST00000557626 Q86TA4 180 aa8.91□□□□□ -0.98
TMEM260-215ENST00000557626 IGF2BP2-AS1Q96M15 143 aa8.91□□□□□ -0.98
TMEM260-215ENST00000557626 C8orf49Q96NF6 230 aa8.91□□□□□ -0.98
TMEM260-215ENST00000557626 ODF3Q96PU9 254 aa8.91□□□□□ -0.98
TMEM260-215ENST00000557626 EIF5A2Q9GZV4 153 aaKnown RBP8.91□□□□□ -0.98
TMEM260-215ENST00000557626 GOLT1BQ9Y3E0 138 aa8.91□□□□□ -0.98
TMEM260-215ENST00000557626 TMEM250H0YL14 139 aa8.9□□□□□ -0.98
TMEM260-215ENST00000557626 SIVA1O15304 175 aa8.9□□□□□ -0.98
TMEM260-215ENST00000557626 PDE6DO43924 150 aa8.9□□□□□ -0.98
TMEM260-215ENST00000557626 AKR1C3P42330 323 aa8.9□□□□□ -0.98
TMEM260-215ENST00000557626 RPL35P42766 123 aaKnown RBP8.9□□□□□ -0.98
TMEM260-215ENST00000557626 ZNF80P51504 273 aaPredicted RBP8.9□□□□□ -0.98
TMEM260-215ENST00000557626 PRNTQ86SH4 94 aa8.9□□□□□ -0.98
TMEM260-215ENST00000557626 MLST8Q9BVC4 326 aa8.9□□□□□ -0.98
TMEM260-215ENST00000557626 CRCT1Q9UGL9 99 aa8.9□□□□□ -0.98
TMEM260-215ENST00000557626 TRAV12-2A0A075B6T6 113 aa8.89□□□□□ -0.99
TMEM260-215ENST00000557626 LTAP01374 205 aa8.89□□□□□ -0.99
TMEM260-215ENST00000557626 CRIP1P50238 77 aa8.89□□□□□ -0.99
TMEM260-215ENST00000557626 TMEM78Q5T7P6 136 aa8.89□□□□□ -0.99
TMEM260-215ENST00000557626 COX8CQ7Z4L0 72 aa8.89□□□□□ -0.99
TMEM260-215ENST00000557626 C1orf158Q8N1D5 194 aa8.89□□□□□ -0.99
TMEM260-215ENST00000557626 EIF4E3Q8N5X7 224 aaKnown RBP8.89□□□□□ -0.99
TMEM260-215ENST00000557626 TRBV7-9A0A0J9YWB2 115 aa8.88□□□□□ -0.99
TMEM260-215ENST00000557626 PGPEP1LA6NFU8 196 aa8.88□□□□□ -0.99
TMEM260-215ENST00000557626 BTN1A1Q13410 526 aa8.88□□□□□ -0.99
TMEM260-215ENST00000557626 PEA15Q15121 130 aa8.88□□□□□ -0.99
TMEM260-215ENST00000557626 GFI1BQ5VTD9 330 aa8.88□□□□□ -0.99
TMEM260-215ENST00000557626 SCXQ7RTU7 201 aa8.88□□□□□ -0.99
TMEM260-215ENST00000557626 COMMD7Q86VX2 200 aa8.88□□□□□ -0.99
TMEM260-215ENST00000557626 FMC1Q96HJ9 113 aa8.88□□□□□ -0.99
TMEM260-215ENST00000557626 PARLQ9H300 379 aa8.88□□□□□ -0.99
TMEM260-215ENST00000557626 LENEPQ9Y5L5 61 aa8.88□□□□□ -0.99
TMEM260-215ENST00000557626 LPAP08519 4548 aa8.87□□□□□ -0.99
TMEM260-215ENST00000557626 J3KRW8 73 aa8.87□□□□□ -0.99
TMEM260-215ENST00000557626 ZNF324O75467 553 aaPredicted RBP8.87□□□□□ -0.99
TMEM260-215ENST00000557626 PRM2P04554 102 aa8.87□□□□□ -0.99
TMEM260-215ENST00000557626 CDKN1BP46527 198 aa8.87□□□□□ -0.99
TMEM260-215ENST00000557626 TAS2R60P59551 318 aa8.87□□□□□ -0.99
TMEM260-215ENST00000557626 CENPWQ5EE01 88 aa8.87□□□□□ -0.99
TMEM260-215ENST00000557626 NHLRC2Q8NBF2 726 aa8.87□□□□□ -0.99
TMEM260-215ENST00000557626 ZC2HC1AQ96GY0 325 aa8.87□□□□□ -0.99
TMEM260-215ENST00000557626 SMDT1Q9H4I9 107 aa8.87□□□□□ -0.99
TMEM260-215ENST00000557626 TREM1Q9NP99 234 aa8.87□□□□□ -0.99
TMEM260-215ENST00000557626 C11orf21Q9P2W6 132 aa8.87□□□□□ -0.99
TMEM260-215ENST00000557626 TRAV26-1A0A087WT03 109 aa8.86□□□□□ -0.99
TMEM260-215ENST00000557626 FBLL1A6NHQ2 334 aaKnown RBP8.86□□□□□ -0.99
TMEM260-215ENST00000557626 CBY3A6NI87 242 aa8.86□□□□□ -0.99
TMEM260-215ENST00000557626 K7EQM0 130 aa8.86□□□□□ -0.99
TMEM260-215ENST00000557626 S100A9P06702 114 aaKnown RBP8.86□□□□□ -0.99
TMEM260-215ENST00000557626 ADCYAP1P18509 176 aa8.86□□□□□ -0.99
TMEM260-215ENST00000557626 LEPP41159 167 aa8.86□□□□□ -0.99
TMEM260-215ENST00000557626 HNRNPA3P51991 378 aaKnown RBP8.86□□□□□ -0.99
TMEM260-215ENST00000557626 BAGE2Q86Y30 109 aa8.86□□□□□ -0.99
TMEM260-215ENST00000557626 TMEM183AQ8IXX5 376 aa8.86□□□□□ -0.99
TMEM260-215ENST00000557626 ZFP30Q9Y2G7 519 aa8.86□□□□□ -0.99
TMEM260-215ENST00000557626 C7orf71A4D174 169 aa8.85□□□□□ -0.99
TMEM260-215ENST00000557626 K7EN84 100 aa8.85□□□□□ -0.99
TMEM260-215ENST00000557626 RNASE4P34096 147 aaKnown RBP8.85□□□□□ -0.99
TMEM260-215ENST00000557626 CEBPGP53567 150 aa8.85□□□□□ -0.99
TMEM260-215ENST00000557626 UBE2G1P62253 170 aa8.85□□□□□ -0.99
TMEM260-215ENST00000557626 OR5I1Q13606 314 aa8.85□□□□□ -0.99
TMEM260-215ENST00000557626 ZNF674Q2M3X9 581 aa8.85□□□□□ -0.99
TMEM260-215ENST00000557626 SAPCD1Q5SSQ6 148 aa8.85□□□□□ -0.99
TMEM260-215ENST00000557626 LCE2AQ5TA79 106 aaPredicted RBP8.85□□□□□ -0.99
TMEM260-215ENST00000557626 Q6AWC8 147 aa8.85□□□□□ -0.99
TMEM260-215ENST00000557626 SLC7A5P1Q8MH63 180 aa8.85□□□□□ -0.99
TMEM260-215ENST00000557626 OCC1Q8TAD7 63 aa8.85□□□□□ -0.99
TMEM260-215ENST00000557626 TRAV12-3A0A0B4J271 114 aa8.84□□□□□ -0.99
TMEM260-215ENST00000557626 A0A0J9YY99 117 aa8.84□□□□□ -0.99
TMEM260-215ENST00000557626 C9JCJ5 164 aa8.84□□□□□ -0.99
TMEM260-215ENST00000557626 GPX1P07203 203 aa8.84□□□□□ -0.99
TMEM260-215ENST00000557626 SFTA3P0C7M3 94 aa8.84□□□□□ -0.99
TMEM260-215ENST00000557626 TSPOP30536 169 aa8.84□□□□□ -0.99
TMEM260-215ENST00000557626 UQCC3Q6UW78 93 aa8.84□□□□□ -0.99
TMEM260-215ENST00000557626 TMEM208Q9BTX3 173 aa8.84□□□□□ -0.99
TMEM260-215ENST00000557626 TMEM218A2RU14 115 aa8.83□□□□□ -1
TMEM260-215ENST00000557626 GCGP01275 180 aa8.83□□□□□ -1
TMEM260-215ENST00000557626 SMIM7Q9BQ49 75 aa8.83□□□□□ -1
TMEM260-215ENST00000557626 C19orf71A6NCJ1 209 aa8.82□□□□□ -1
TMEM260-215ENST00000557626 ZNF727A8MUV8 499 aa8.82□□□□□ -1
TMEM260-215ENST00000557626 INSP01308 110 aa8.82□□□□□ -1
TMEM260-215ENST00000557626 AZU1P20160 251 aa8.82□□□□□ -1
TMEM260-215ENST00000557626 GNG4P50150 75 aa8.82□□□□□ -1
TMEM260-215ENST00000557626 SMUG1Q53HV7 270 aa8.82□□□□□ -1
TMEM260-215ENST00000557626 LINC01551Q86U37 167 aa8.82□□□□□ -1
TMEM260-215ENST00000557626 Q8N814 137 aa8.82□□□□□ -1
TMEM260-215ENST00000557626 DAZAP1Q96EP5 407 aaKnown RBP8.82□□□□□ -1
TMEM260-215ENST00000557626 MSRB1Q9NZV6 116 aa8.82□□□□□ -1
TMEM260-215ENST00000557626 IGKV3D-20A0A0C4DH25 116 aa8.81□□□□□ -1
TMEM260-215ENST00000557626 SH2D1AO60880 128 aa8.81□□□□□ -1
TMEM260-215ENST00000557626 NXPH4O95158 308 aa8.81□□□□□ -1
TMEM260-215ENST00000557626 PFN1P07737 140 aaKnown RBP8.81□□□□□ -1
TMEM260-215ENST00000557626 RPL37AP61513 92 aaKnown RBP8.81□□□□□ -1
TMEM260-215ENST00000557626 NDFIP1Q9BT67 221 aa8.81□□□□□ -1
TMEM260-215ENST00000557626 SDF2L1Q9HCN8 221 aa8.81□□□□□ -1
TMEM260-215ENST00000557626 TP53TG3Q9ULZ0 132 aa8.81□□□□□ -1
TMEM260-215ENST00000557626 LY96Q9Y6Y9 160 aa8.81□□□□□ -1
TMEM260-215ENST00000557626 TRAV9-2A0A087WT02 112 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms