RNA–Protein interactions for RNA: ENST00000556876.1

CHGA-206, Transcript of chromogranin A, humanhuman

TSL 2

Gene CHGA, Length 912 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-206ENST00000556876 WFDC1Q9HC57 220 aa11.49□□□□□ -0.57
CHGA-206ENST00000556876 EPDR1Q9UM22 224 aa11.49□□□□□ -0.57
CHGA-206ENST00000556876 S100A4P26447 101 aaKnown RBP11.48□□□□□ -0.57
CHGA-206ENST00000556876 GCHFRP30047 84 aa11.48□□□□□ -0.57
CHGA-206ENST00000556876 FGF8P55075 233 aaPredicted RBP11.48□□□□□ -0.57
CHGA-206ENST00000556876 GNG5P63218 68 aa11.48□□□□□ -0.57
CHGA-206ENST00000556876 IFITM3Q01628 133 aa11.48□□□□□ -0.57
CHGA-206ENST00000556876 RAB24Q969Q5 203 aa11.48□□□□□ -0.57
CHGA-206ENST00000556876 HMGB3O15347 200 aaKnown RBP11.47□□□□□ -0.57
CHGA-206ENST00000556876 SUMO1P63165 101 aaKnown RBP11.47□□□□□ -0.57
CHGA-206ENST00000556876 NKX6-2Q9C056 277 aaPredicted RBP11.47□□□□□ -0.57
CHGA-206ENST00000556876 ACTR3CQ9C0K3 210 aaPredicted RBP11.47□□□□□ -0.57
CHGA-206ENST00000556876 Q9HAA7 133 aa11.47□□□□□ -0.57
CHGA-206ENST00000556876 TNFSF18Q9UNG2 199 aa11.47□□□□□ -0.57
CHGA-206ENST00000556876 A0A1W2PRE2 83 aa11.46□□□□□ -0.57
CHGA-206ENST00000556876 SMR3BP02814 79 aaPredicted RBP11.46□□□□□ -0.57
CHGA-206ENST00000556876 ZNF506Q5JVG8 444 aa11.46□□□□□ -0.57
CHGA-206ENST00000556876 FABP5P3A8MUU1 101 aa11.45□□□□□ -0.58
CHGA-206ENST00000556876 EIF3GO75821 320 aaKnown RBP eCLIP11.45□□□□□ -0.58
CHGA-206ENST00000556876 IGHV3-30P01768 117 aa11.45□□□□□ -0.58
CHGA-206ENST00000556876 IGHV3-33P01772 117 aa11.45□□□□□ -0.58
CHGA-206ENST00000556876 IGHV3-30-3P0DP02 117 aa11.45□□□□□ -0.58
CHGA-206ENST00000556876 IGHV3-30-5P0DP03 117 aa11.45□□□□□ -0.58
CHGA-206ENST00000556876 ZNF80P51504 273 aaPredicted RBP11.45□□□□□ -0.58
CHGA-206ENST00000556876 PRNTQ86SH4 94 aa11.45□□□□□ -0.58
CHGA-206ENST00000556876 HSD17B11Q8NBQ5 300 aa11.45□□□□□ -0.58
CHGA-206ENST00000556876 RMI2Q96E14 147 aa11.45□□□□□ -0.58
CHGA-206ENST00000556876 SGK494Q96LW2 274 aa11.45□□□□□ -0.58
CHGA-206ENST00000556876 AQP10Q96PS8 301 aa11.45□□□□□ -0.58
CHGA-206ENST00000556876 SRRM2Q9UQ35 2752 aaKnown RBP11.45□□□□□ -0.58
CHGA-206ENST00000556876 IGHV3-73A0A0B4J1V6 119 aa11.44□□□□□ -0.58
CHGA-206ENST00000556876 PGPEP1LA6NFU8 196 aa11.44□□□□□ -0.58
CHGA-206ENST00000556876 GGTLC3B5MD39 225 aa11.44□□□□□ -0.58
CHGA-206ENST00000556876 PLA2G1BP04054 148 aaKnown RBP11.44□□□□□ -0.58
CHGA-206ENST00000556876 RNASE3P12724 160 aaKnown RBP11.44□□□□□ -0.58
CHGA-206ENST00000556876 DPPA3Q6W0C5 159 aa11.44□□□□□ -0.58
CHGA-206ENST00000556876 SYT8Q8NBV8 401 aa11.44□□□□□ -0.58
CHGA-206ENST00000556876 C11orf21Q9P2W6 132 aa11.44□□□□□ -0.58
CHGA-206ENST00000556876 MYCBP2O75592 4640 aa11.43□□□□□ -0.58
CHGA-206ENST00000556876 RHODO00212 210 aa11.43□□□□□ -0.58
CHGA-206ENST00000556876 IGLV2-11P01706 119 aa11.43□□□□□ -0.58
CHGA-206ENST00000556876 ATP6V0CP27449 155 aa11.43□□□□□ -0.58
CHGA-206ENST00000556876 ASIPP42127 132 aa11.43□□□□□ -0.58
CHGA-206ENST00000556876 LGALSLQ3ZCW2 172 aaPredicted RBP11.43□□□□□ -0.58
CHGA-206ENST00000556876 IL36BQ9NZH7 164 aa11.43□□□□□ -0.58
CHGA-206ENST00000556876 URGCP-MRPS24S4R325 110 aa11.43□□□□□ -0.58
CHGA-206ENST00000556876 INO80EQ8NBZ0 244 aaPredicted RBP11.42□□□□□ -0.58
CHGA-206ENST00000556876 HIST1H2BAQ96A08 127 aa11.42□□□□□ -0.58
CHGA-206ENST00000556876 PARLQ9H300 379 aa11.42□□□□□ -0.58
CHGA-206ENST00000556876 BORCS7-ASMTA0A0B4J1R7 106 aa11.41□□□□□ -0.58
CHGA-206ENST00000556876 A6NHS1 94 aa11.41□□□□□ -0.58
CHGA-206ENST00000556876 IFNA7P01567 189 aa11.41□□□□□ -0.58
CHGA-206ENST00000556876 ELOBQ15370 118 aa11.41□□□□□ -0.58
CHGA-206ENST00000556876 DNLZQ5SXM8 178 aa11.4□□□□□ -0.58
CHGA-206ENST00000556876 KCNIP4Q6PIL6 250 aa11.4□□□□□ -0.58
CHGA-206ENST00000556876 Q8N976 141 aa11.4□□□□□ -0.58
CHGA-206ENST00000556876 CHCHD7Q9BUK0 85 aa11.4□□□□□ -0.58
CHGA-206ENST00000556876 ZFP30Q9Y2G7 519 aa11.4□□□□□ -0.58
CHGA-206ENST00000556876 IGKV3D-20A0A0C4DH25 116 aa11.39□□□□□ -0.59
CHGA-206ENST00000556876 GAGE12JA6NER3 117 aa11.39□□□□□ -0.59
CHGA-206ENST00000556876 GAGE1Q13065 139 aa11.39□□□□□ -0.59
CHGA-206ENST00000556876 GAGE4Q13068 117 aa11.39□□□□□ -0.59
CHGA-206ENST00000556876 GAGE5Q13069 117 aa11.39□□□□□ -0.59
CHGA-206ENST00000556876 GAGE13Q4V321 117 aa11.39□□□□□ -0.59
CHGA-206ENST00000556876 LINC00479Q96M42 142 aa11.39□□□□□ -0.59
CHGA-206ENST00000556876 MED28Q9H204 178 aa11.39□□□□□ -0.59
CHGA-206ENST00000556876 B4DEV8 164 aa11.38□□□□□ -0.59
CHGA-206ENST00000556876 J3QL48 77 aa11.38□□□□□ -0.59
CHGA-206ENST00000556876 LINC00694P0DN24 101 aa11.38□□□□□ -0.59
CHGA-206ENST00000556876 TCEAL7Q9BRU2 100 aa11.38□□□□□ -0.59
CHGA-206ENST00000556876 ALG5Q9Y673 324 aa11.38□□□□□ -0.59
CHGA-206ENST00000556876 ARL2-SNX15V9GYD0 113 aa11.38□□□□□ -0.59
CHGA-206ENST00000556876 CTXND1A0A1B0GTU2 59 aa11.37□□□□□ -0.59
CHGA-206ENST00000556876 Q6ZSA8 131 aa11.37□□□□□ -0.59
CHGA-206ENST00000556876 COX8CQ7Z4L0 72 aa11.37□□□□□ -0.59
CHGA-206ENST00000556876 OR11H4Q8NGC9 324 aa11.37□□□□□ -0.59
CHGA-206ENST00000556876 OR2T35Q8NGX2 323 aa11.37□□□□□ -0.59
CHGA-206ENST00000556876 DEFB104AQ8WTQ1 72 aa11.37□□□□□ -0.59
CHGA-206ENST00000556876 FLG2Q5D862 2391 aaPredicted RBP11.36□□□□□ -0.59
CHGA-206ENST00000556876 TRBV10-1A0A0K0K1A3 114 aa11.36□□□□□ -0.59
CHGA-206ENST00000556876 PEX7O00628 323 aa11.36□□□□□ -0.59
CHGA-206ENST00000556876 PHLDA3Q9Y5J5 127 aa11.36□□□□□ -0.59
CHGA-206ENST00000556876 DNAH8Q96JB1 4490 aa11.36□□□□□ -0.59
CHGA-206ENST00000556876 A0A087WX48 190 aa11.35□□□□□ -0.59
CHGA-206ENST00000556876 PTTG1O95997 202 aa11.35□□□□□ -0.59
CHGA-206ENST00000556876 GIPP09681 153 aaPredicted RBP11.35□□□□□ -0.59
CHGA-206ENST00000556876 Q0VG73 95 aa11.35□□□□□ -0.59
CHGA-206ENST00000556876 FAM162BQ5T6X4 162 aa11.35□□□□□ -0.59
CHGA-206ENST00000556876 UFSP1Q6NVU6 142 aa11.35□□□□□ -0.59
CHGA-206ENST00000556876 DAZ4Q86SG3 579 aaKnown RBP11.35□□□□□ -0.59
CHGA-206ENST00000556876 FMC1Q96HJ9 113 aa11.35□□□□□ -0.59
CHGA-206ENST00000556876 DAZ3Q9NR90 486 aaKnown RBP11.35□□□□□ -0.59
CHGA-206ENST00000556876 FAM30AQ9NZY2 134 aa11.35□□□□□ -0.59
CHGA-206ENST00000556876 TRAV34A0A0B4J273 112 aa11.34□□□□□ -0.59
CHGA-206ENST00000556876 RBFOX3A6NFN3 312 aa11.34□□□□□ -0.59
CHGA-206ENST00000556876 KRBOX1C9JBD0 128 aa11.34□□□□□ -0.59
CHGA-206ENST00000556876 ARMS2P0C7Q2 107 aa11.34□□□□□ -0.59
CHGA-206ENST00000556876 TPT1P13693 172 aaKnown RBP11.34□□□□□ -0.59
CHGA-206ENST00000556876 C14orf177Q52M58 125 aa11.34□□□□□ -0.59
CHGA-206ENST00000556876 AKR1C8PQ5T2L2 129 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms