RNA–Protein interactions for RNA: ENST00000556864.5

PSEN1-218, Transcript of presenilin 1, humanhuman

TSL 5

Gene PSEN1, Length 574 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-218ENST00000556864 FAM210BQ96KR6 192 aa12.41□□□□□ -0.42
PSEN1-218ENST00000556864 SFTA3P0C7M3 94 aa12.4□□□□□ -0.42
PSEN1-218ENST00000556864 ARMS2P0C7Q2 107 aa12.4□□□□□ -0.42
PSEN1-218ENST00000556864 FAM231DQ6ZW35 169 aa12.4□□□□□ -0.42
PSEN1-218ENST00000556864 RPP21Q9H633 154 aaKnown RBP12.4□□□□□ -0.42
PSEN1-218ENST00000556864 PHLDA3Q9Y5J5 127 aa12.4□□□□□ -0.42
PSEN1-218ENST00000556864 F5H768 121 aa12.39□□□□□ -0.43
PSEN1-218ENST00000556864 TCTAP57738 103 aa12.39□□□□□ -0.43
PSEN1-218ENST00000556864 ZNF876PQ49A33 203 aa12.39□□□□□ -0.43
PSEN1-218ENST00000556864 PIK3CD-AS1Q5SR53 167 aa12.39□□□□□ -0.43
PSEN1-218ENST00000556864 TRAV4A0A0B4J268 109 aa12.38□□□□□ -0.43
PSEN1-218ENST00000556864 ERVFC1-1P60608 527 aa12.38□□□□□ -0.43
PSEN1-218ENST00000556864 ADIRFQ15847 76 aa12.38□□□□□ -0.43
PSEN1-218ENST00000556864 COMMD7Q86VX2 200 aa12.38□□□□□ -0.43
PSEN1-218ENST00000556864 ZFP82Q8N141 532 aa12.38□□□□□ -0.43
PSEN1-218ENST00000556864 NUDT10Q8NFP7 164 aa12.38□□□□□ -0.43
PSEN1-218ENST00000556864 NUDT11Q96G61 164 aa12.38□□□□□ -0.43
PSEN1-218ENST00000556864 RNASE7Q9H1E1 156 aaKnown RBP12.38□□□□□ -0.43
PSEN1-218ENST00000556864 IGLL5B9A064 214 aa12.37□□□□□ -0.43
PSEN1-218ENST00000556864 GATCO43716 136 aaKnown RBP12.37□□□□□ -0.43
PSEN1-218ENST00000556864 C15orf54Q8N8G6 183 aa12.37□□□□□ -0.43
PSEN1-218ENST00000556864 SCRT2Q9NQ03 307 aa12.37□□□□□ -0.43
PSEN1-218ENST00000556864 IGHV4-4A0A075B6R2 117 aa12.36□□□□□ -0.43
PSEN1-218ENST00000556864 SNAI2O43623 268 aa12.36□□□□□ -0.43
PSEN1-218ENST00000556864 IGHV3-53P01767 116 aa12.36□□□□□ -0.43
PSEN1-218ENST00000556864 OR5AL1P0C617 328 aa12.36□□□□□ -0.43
PSEN1-218ENST00000556864 RPL23P62829 140 aaKnown RBP12.36□□□□□ -0.43
PSEN1-218ENST00000556864 CT83Q5H943 113 aa12.36□□□□□ -0.43
PSEN1-218ENST00000556864 FER1L6-AS1Q8NA97 138 aa12.36□□□□□ -0.43
PSEN1-218ENST00000556864 OR4C5Q8NGB2 326 aa12.36□□□□□ -0.43
PSEN1-218ENST00000556864 A0A1W2PPQ1 181 aa12.35□□□□□ -0.43
PSEN1-218ENST00000556864 LINC00862A6NCI5 91 aa12.35□□□□□ -0.43
PSEN1-218ENST00000556864 A8MWV9 139 aa12.35□□□□□ -0.43
PSEN1-218ENST00000556864 CIDEAO60543 219 aa12.35□□□□□ -0.43
PSEN1-218ENST00000556864 ISOC2Q96AB3 205 aa12.35□□□□□ -0.43
PSEN1-218ENST00000556864 TPPP3Q9BW30 176 aa12.35□□□□□ -0.43
PSEN1-218ENST00000556864 OSTCQ9NRP0 149 aa12.35□□□□□ -0.43
PSEN1-218ENST00000556864 TRGV4A0A0C4DH28 118 aa12.34□□□□□ -0.43
PSEN1-218ENST00000556864 M0R381 172 aa12.34□□□□□ -0.43
PSEN1-218ENST00000556864 NXPH4O95158 308 aa12.34□□□□□ -0.43
PSEN1-218ENST00000556864 IGLC6P0CF74 106 aa12.34□□□□□ -0.43
PSEN1-218ENST00000556864 SLAQ13239 276 aa12.34□□□□□ -0.43
PSEN1-218ENST00000556864 SPANXN1Q5VSR9 72 aa12.34□□□□□ -0.43
PSEN1-218ENST00000556864 TMEM88Q6PEY1 159 aa12.34□□□□□ -0.43
PSEN1-218ENST00000556864 C15orf53Q8NAA6 179 aa12.34□□□□□ -0.43
PSEN1-218ENST00000556864 SSBP4Q9BWG4 385 aaPredicted RBP12.34□□□□□ -0.43
PSEN1-218ENST00000556864 STARD9Q9P2P6 4700 aa12.33□□□□□ -0.44
PSEN1-218ENST00000556864 A8MWL6 223 aa12.33□□□□□ -0.44
PSEN1-218ENST00000556864 F2Z2F3 143 aa12.33□□□□□ -0.44
PSEN1-218ENST00000556864 RHODO00212 210 aa12.33□□□□□ -0.44
PSEN1-218ENST00000556864 RS1O15537 224 aa12.33□□□□□ -0.44
PSEN1-218ENST00000556864 GZMBP10144 247 aa12.33□□□□□ -0.44
PSEN1-218ENST00000556864 CACNG7P62955 275 aa12.33□□□□□ -0.44
PSEN1-218ENST00000556864 PNRC1Q12796 327 aaPredicted RBP12.33□□□□□ -0.44
PSEN1-218ENST00000556864 ZNF575Q86XF7 245 aa12.33□□□□□ -0.44
PSEN1-218ENST00000556864 OR10AG1Q8NH19 301 aa12.33□□□□□ -0.44
PSEN1-218ENST00000556864 SFRP2Q96HF1 295 aa12.33□□□□□ -0.44
PSEN1-218ENST00000556864 HOXA5P20719 270 aa12.32□□□□□ -0.44
PSEN1-218ENST00000556864 CTRLP40313 264 aa12.32□□□□□ -0.44
PSEN1-218ENST00000556864 CFAP126Q5VTH2 177 aa12.32□□□□□ -0.44
PSEN1-218ENST00000556864 ZNF479Q96JC4 524 aa12.32□□□□□ -0.44
PSEN1-218ENST00000556864 PRO0255Q9UI72 69 aa12.32□□□□□ -0.44
PSEN1-218ENST00000556864 TRAV26-1A0A087WT03 109 aa12.31□□□□□ -0.44
PSEN1-218ENST00000556864 H3BNG1 76 aa12.31□□□□□ -0.44
PSEN1-218ENST00000556864 OR10G8Q8NGN5 311 aa12.31□□□□□ -0.44
PSEN1-218ENST00000556864 AP1S3Q96PC3 154 aa12.31□□□□□ -0.44
PSEN1-218ENST00000556864 TMEM218A2RU14 115 aa12.3□□□□□ -0.44
PSEN1-218ENST00000556864 FHL2Q14192 279 aa12.3□□□□□ -0.44
PSEN1-218ENST00000556864 DMRTA1Q5VZB9 504 aa12.3□□□□□ -0.44
PSEN1-218ENST00000556864 ZFP2Q6ZN57 461 aa12.3□□□□□ -0.44
PSEN1-218ENST00000556864 POM121L12Q8N7R1 296 aa12.3□□□□□ -0.44
PSEN1-218ENST00000556864 BORCS7Q96B45 105 aa12.3□□□□□ -0.44
PSEN1-218ENST00000556864 GFRA4Q9GZZ7 299 aa12.3□□□□□ -0.44
PSEN1-218ENST00000556864 TSKUQ8WUA8 353 aa12.29□□□□□ -0.44
PSEN1-218ENST00000556864 APLNQ9ULZ1 77 aa12.29□□□□□ -0.44
PSEN1-218ENST00000556864 DYNC2H1Q8NCM8 4307 aaKnown RBP12.29□□□□□ -0.44
PSEN1-218ENST00000556864 A0A0J9YY99 117 aa12.28□□□□□ -0.44
PSEN1-218ENST00000556864 FAM231BA6NCW3 169 aa12.28□□□□□ -0.44
PSEN1-218ENST00000556864 F8W036 122 aa12.28□□□□□ -0.44
PSEN1-218ENST00000556864 PPP1R2P9O14990 202 aa12.28□□□□□ -0.44
PSEN1-218ENST00000556864 PAX4O43316 350 aa12.28□□□□□ -0.44
PSEN1-218ENST00000556864 WDR73Q6P4I2 378 aa12.28□□□□□ -0.44
PSEN1-218ENST00000556864 LYZL1Q6UWQ5 148 aa12.28□□□□□ -0.44
PSEN1-218ENST00000556864 HHLA3Q9XRX5 114 aa12.28□□□□□ -0.44
PSEN1-218ENST00000556864 V9GYV3 84 aa12.28□□□□□ -0.44
PSEN1-218ENST00000556864 MUC21A0A0G2JKD1 596 aa12.27□□□□□ -0.45
PSEN1-218ENST00000556864 MUC21A0A140T8X8 626 aa12.27□□□□□ -0.45
PSEN1-218ENST00000556864 TRGC1P0CF51 173 aa12.27□□□□□ -0.45
PSEN1-218ENST00000556864 SMIM17P0DL12 118 aa12.27□□□□□ -0.45
PSEN1-218ENST00000556864 GATA1P15976 413 aaPredicted RBP12.27□□□□□ -0.45
PSEN1-218ENST00000556864 CRYBA4P53673 196 aa12.27□□□□□ -0.45
PSEN1-218ENST00000556864 FAM74A4Q5TZK3 123 aa12.27□□□□□ -0.45
PSEN1-218ENST00000556864 CNFNQ9BYD5 112 aa12.27□□□□□ -0.45
PSEN1-218ENST00000556864 IGHV3-73A0A0B4J1V6 119 aa12.26□□□□□ -0.45
PSEN1-218ENST00000556864 NUDT3O95989 172 aa12.26□□□□□ -0.45
PSEN1-218ENST00000556864 RHOHQ15669 191 aa12.26□□□□□ -0.45
PSEN1-218ENST00000556864 GTSF1Q8WW33 167 aa12.26□□□□□ -0.45
PSEN1-218ENST00000556864 PRADC1Q9BSG0 188 aa12.26□□□□□ -0.45
PSEN1-218ENST00000556864 SEC11CQ9BY50 192 aa12.26□□□□□ -0.45
PSEN1-218ENST00000556864 ICOSQ9Y6W8 199 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms