RNA–Protein interactions for RNA: ENST00000556827.1

HIF1A-209, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 2

Gene HIF1A, Length 752 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-209ENST00000556827 CHCHD10Q8WYQ3 142 aaPredicted RBP3.16□□□□□ -1.9
HIF1A-209ENST00000556827 SLC25A21Q9BQT8 299 aaPredicted RBP3.16□□□□□ -1.9
HIF1A-209ENST00000556827 ARV1Q9H2C2 271 aa3.16□□□□□ -1.9
HIF1A-209ENST00000556827 CCDC59Q9P031 241 aaKnown RBP3.16□□□□□ -1.9
HIF1A-209ENST00000556827 PRO0255Q9UI72 69 aa3.16□□□□□ -1.9
HIF1A-209ENST00000556827 LY96Q9Y6Y9 160 aa3.16□□□□□ -1.9
HIF1A-209ENST00000556827 A0A096LPF7 62 aa3.15□□□□□ -1.91
HIF1A-209ENST00000556827 TRGV4A0A0C4DH28 118 aa3.15□□□□□ -1.91
HIF1A-209ENST00000556827 FNDC10F2Z333 226 aa3.15□□□□□ -1.91
HIF1A-209ENST00000556827 L7N2F9 121 aa3.15□□□□□ -1.91
HIF1A-209ENST00000556827 SSSCA1O60232 199 aa3.15□□□□□ -1.91
HIF1A-209ENST00000556827 ZNF324O75467 553 aaPredicted RBP3.15□□□□□ -1.91
HIF1A-209ENST00000556827 SNAPINO95295 136 aa3.15□□□□□ -1.91
HIF1A-209ENST00000556827 SFT2D2O95562 160 aa3.15□□□□□ -1.91
HIF1A-209ENST00000556827 SLC25A5P05141 298 aaKnown RBP3.15□□□□□ -1.91
HIF1A-209ENST00000556827 GPX1P07203 203 aa3.15□□□□□ -1.91
HIF1A-209ENST00000556827 SRIP30626 198 aa3.15□□□□□ -1.91
HIF1A-209ENST00000556827 RPS10P46783 165 aaKnown RBP3.15□□□□□ -1.91
HIF1A-209ENST00000556827 RRAS2P62070 204 aaPredicted RBP3.15□□□□□ -1.91
HIF1A-209ENST00000556827 C10orf113Q5VZT2 155 aa3.15□□□□□ -1.91
HIF1A-209ENST00000556827 Q6ZTI0 123 aa3.15□□□□□ -1.91
HIF1A-209ENST00000556827 NEGR1Q7Z3B1 354 aa3.15□□□□□ -1.91
HIF1A-209ENST00000556827 C10orf126Q8N4M7 172 aa3.15□□□□□ -1.91
HIF1A-209ENST00000556827 DEDD2Q8WXF8 326 aa3.15□□□□□ -1.91
HIF1A-209ENST00000556827 SMIM8Q96KF7 97 aa3.15□□□□□ -1.91
HIF1A-209ENST00000556827 C18orf15Q96N68 181 aa3.15□□□□□ -1.91
HIF1A-209ENST00000556827 ODF3Q96PU9 254 aa3.15□□□□□ -1.91
HIF1A-209ENST00000556827 MIXL1Q9H2W2 232 aa3.15□□□□□ -1.91
HIF1A-209ENST00000556827 HHLA3Q9XRX5 114 aa3.15□□□□□ -1.91
HIF1A-209ENST00000556827 FUT9Q9Y231 359 aa3.15□□□□□ -1.91
HIF1A-209ENST00000556827 TIMM9Q9Y5J7 89 aa3.15□□□□□ -1.91
HIF1A-209ENST00000556827 A0A087WTM6 91 aa3.14□□□□□ -1.91
HIF1A-209ENST00000556827 TRAV5A0A0B4J249 113 aa3.14□□□□□ -1.91
HIF1A-209ENST00000556827 C7orf71A4D174 169 aa3.14□□□□□ -1.91
HIF1A-209ENST00000556827 K7EPK0 472 aa3.14□□□□□ -1.91
HIF1A-209ENST00000556827 AGPAT2O15120 278 aa3.14□□□□□ -1.91
HIF1A-209ENST00000556827 RS1O15537 224 aa3.14□□□□□ -1.91
HIF1A-209ENST00000556827 MPDU1O75352 247 aa3.14□□□□□ -1.91
HIF1A-209ENST00000556827 ORM1P02763 201 aa3.14□□□□□ -1.91
HIF1A-209ENST00000556827 SMR3BP02814 79 aaPredicted RBP3.14□□□□□ -1.91
HIF1A-209ENST00000556827 METTL15P1P0C7V9 234 aa3.14□□□□□ -1.91
HIF1A-209ENST00000556827 HIST1H1EP10412 219 aaKnown RBP3.14□□□□□ -1.91
HIF1A-209ENST00000556827 RNASE4P34096 147 aaKnown RBP3.14□□□□□ -1.91
HIF1A-209ENST00000556827 TAS2R30P59541 319 aa3.14□□□□□ -1.91
HIF1A-209ENST00000556827 UBE2MP61081 183 aaKnown RBP3.14□□□□□ -1.91
HIF1A-209ENST00000556827 SLC38A11Q08AI6 406 aa3.14□□□□□ -1.91
HIF1A-209ENST00000556827 PPP1R1AQ13522 171 aa3.14□□□□□ -1.91
HIF1A-209ENST00000556827 ZNF846Q147U1 533 aa3.14□□□□□ -1.91
HIF1A-209ENST00000556827 TMEM78Q5T7P6 136 aa3.14□□□□□ -1.91
HIF1A-209ENST00000556827 EIF4E3Q8N5X7 224 aaKnown RBP3.14□□□□□ -1.91
HIF1A-209ENST00000556827 OR1L4Q8NGR5 311 aa3.14□□□□□ -1.91
HIF1A-209ENST00000556827 DYNC2LI1Q8TCX1 351 aa3.14□□□□□ -1.91
HIF1A-209ENST00000556827 ZNF431Q8TF32 576 aaPredicted RBP3.14□□□□□ -1.91
HIF1A-209ENST00000556827 RAB2BQ8WUD1 216 aa3.14□□□□□ -1.91
HIF1A-209ENST00000556827 LINC00477Q96M19 166 aa3.14□□□□□ -1.91
HIF1A-209ENST00000556827 PFDN5Q99471 154 aa3.14□□□□□ -1.91
HIF1A-209ENST00000556827 TXNDC17Q9BRA2 123 aa3.14□□□□□ -1.91
HIF1A-209ENST00000556827 GGACTQ9BVM4 153 aa3.14□□□□□ -1.91
HIF1A-209ENST00000556827 NAA50Q9GZZ1 169 aaKnown RBP3.14□□□□□ -1.91
HIF1A-209ENST00000556827 C20orf85Q9H1P6 137 aa3.14□□□□□ -1.91
HIF1A-209ENST00000556827 GSKIPQ9P0R6 139 aa3.14□□□□□ -1.91
HIF1A-209ENST00000556827 CENPXA8MT69 81 aa3.13□□□□□ -1.91
HIF1A-209ENST00000556827 C9JCJ5 164 aa3.13□□□□□ -1.91
HIF1A-209ENST00000556827 IGHV3-53P01767 116 aa3.13□□□□□ -1.91
HIF1A-209ENST00000556827 CRYGDP07320 174 aa3.13□□□□□ -1.91
HIF1A-209ENST00000556827 NMBP08949 121 aa3.13□□□□□ -1.91
HIF1A-209ENST00000556827 OR4E1P0C645 316 aa3.13□□□□□ -1.91
HIF1A-209ENST00000556827 PRB4P10163 310 aaPredicted RBP3.13□□□□□ -1.91
HIF1A-209ENST00000556827 PVALBP20472 110 aaPredicted RBP3.13□□□□□ -1.91
HIF1A-209ENST00000556827 S100A5P33763 92 aa3.13□□□□□ -1.91
HIF1A-209ENST00000556827 BCAP31P51572 246 aa3.13□□□□□ -1.91
HIF1A-209ENST00000556827 TMBIM6P55061 237 aa3.13□□□□□ -1.91
HIF1A-209ENST00000556827 TCL1AP56279 114 aa3.13□□□□□ -1.91
HIF1A-209ENST00000556827 SPCS2Q15005 226 aa3.13□□□□□ -1.91
HIF1A-209ENST00000556827 IAH1Q2TAA2 248 aaPredicted RBP3.13□□□□□ -1.91
HIF1A-209ENST00000556827 IBA57Q5T440 356 aaKnown RBP3.13□□□□□ -1.91
HIF1A-209ENST00000556827 LYPD5Q6UWN5 251 aa3.13□□□□□ -1.91
HIF1A-209ENST00000556827 PATE2Q6UY27 113 aa3.13□□□□□ -1.91
HIF1A-209ENST00000556827 Q8N9L7 120 aa3.13□□□□□ -1.91
HIF1A-209ENST00000556827 BCL7BQ9BQE9 202 aa3.13□□□□□ -1.91
HIF1A-209ENST00000556827 LINC00467Q9BRT7 94 aa3.13□□□□□ -1.91
HIF1A-209ENST00000556827 TMEM70Q9BUB7 260 aa3.13□□□□□ -1.91
HIF1A-209ENST00000556827 PARD6GQ9BYG4 376 aaPredicted RBP3.13□□□□□ -1.91
HIF1A-209ENST00000556827 MRPS26Q9BYN8 205 aaKnown RBP3.13□□□□□ -1.91
HIF1A-209ENST00000556827 SRRQ9GZT4 340 aa3.13□□□□□ -1.91
HIF1A-209ENST00000556827 SH3BGRL3Q9H299 93 aa3.13□□□□□ -1.91
HIF1A-209ENST00000556827 SLC39A9Q9NUM3 307 aa3.13□□□□□ -1.91
HIF1A-209ENST00000556827 PRELID1Q9Y255 219 aa3.13□□□□□ -1.91
HIF1A-209ENST00000556827 HERC2O95714 4834 aa3.13□□□□□ -1.91
HIF1A-209ENST00000556827 KIAA1109Q2LD37 5005 aa3.13□□□□□ -1.91
HIF1A-209ENST00000556827 TRAV8-6A0A0B4J262 113 aa3.12□□□□□ -1.91
HIF1A-209ENST00000556827 NAP1L6A6NFF2 107 aa3.12□□□□□ -1.91
HIF1A-209ENST00000556827 SPINK4O60575 86 aa3.12□□□□□ -1.91
HIF1A-209ENST00000556827 FUSP35637 526 aaKnown RBP eCLIP3.12□□□□□ -1.91
HIF1A-209ENST00000556827 CSN1S1P47710 185 aa3.12□□□□□ -1.91
HIF1A-209ENST00000556827 PPT1P50897 306 aa3.12□□□□□ -1.91
HIF1A-209ENST00000556827 CRYBA4P53673 196 aa3.12□□□□□ -1.91
HIF1A-209ENST00000556827 PDE6HQ13956 83 aa3.12□□□□□ -1.91
HIF1A-209ENST00000556827 TRIQKQ629K1 86 aa3.12□□□□□ -1.91
HIF1A-209ENST00000556827 TMEM14EPQ6UXP3 125 aa3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms