RNA–Protein interactions for RNA: ENST00000556737.1

SHMT2-224, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-224ENST00000556737 Q6ZR54 194 aa7.22□□□□□ -1.25
SHMT2-224ENST00000556737 UBE2DNLQ8IWF7 75 aa7.22□□□□□ -1.25
SHMT2-224ENST00000556737 TMEM183AQ8IXX5 376 aa7.22□□□□□ -1.25
SHMT2-224ENST00000556737 C15orf54Q8N8G6 183 aa7.22□□□□□ -1.25
SHMT2-224ENST00000556737 GAGE12BA1L429 117 aa7.21□□□□□ -1.26
SHMT2-224ENST00000556737 C7orf77A4D0Y5 90 aa7.21□□□□□ -1.26
SHMT2-224ENST00000556737 SNURFLB1AK76 121 aa7.21□□□□□ -1.26
SHMT2-224ENST00000556737 B4DEV8 164 aa7.21□□□□□ -1.26
SHMT2-224ENST00000556737 RTL8CO15255 209 aa7.21□□□□□ -1.26
SHMT2-224ENST00000556737 GAGE7O76087 117 aa7.21□□□□□ -1.26
SHMT2-224ENST00000556737 GCGP01275 180 aa7.21□□□□□ -1.26
SHMT2-224ENST00000556737 IGLV2-8P01709 118 aa7.21□□□□□ -1.26
SHMT2-224ENST00000556737 GAGE12FP0CL80 117 aa7.21□□□□□ -1.26
SHMT2-224ENST00000556737 GAGE12GP0CL81 117 aa7.21□□□□□ -1.26
SHMT2-224ENST00000556737 GAGE12IP0CL82 117 aa7.21□□□□□ -1.26
SHMT2-224ENST00000556737 HOXA5P20719 270 aa7.21□□□□□ -1.26
SHMT2-224ENST00000556737 LGALS9BQ3B8N2 356 aa7.21□□□□□ -1.26
SHMT2-224ENST00000556737 ANXA2RQ3ZCQ2 193 aa7.21□□□□□ -1.26
SHMT2-224ENST00000556737 IBA57Q5T440 356 aaKnown RBP7.21□□□□□ -1.26
SHMT2-224ENST00000556737 Q6ZTI0 123 aa7.21□□□□□ -1.26
SHMT2-224ENST00000556737 OR10G8Q8NGN5 311 aa7.21□□□□□ -1.26
SHMT2-224ENST00000556737 ISOC2Q96AB3 205 aa7.21□□□□□ -1.26
SHMT2-224ENST00000556737 SMIM12Q96EX1 92 aa7.21□□□□□ -1.26
SHMT2-224ENST00000556737 ZC2HC1AQ96GY0 325 aa7.21□□□□□ -1.26
SHMT2-224ENST00000556737 SFRP2Q96HF1 295 aa7.21□□□□□ -1.26
SHMT2-224ENST00000556737 RNASE7Q9H1E1 156 aaKnown RBP7.21□□□□□ -1.26
SHMT2-224ENST00000556737 GSN-AS1Q9NRJ2 163 aa7.21□□□□□ -1.26
SHMT2-224ENST00000556737 TP53TG3Q9ULZ0 132 aa7.21□□□□□ -1.26
SHMT2-224ENST00000556737 IGLV2-18A0A075B6J9 118 aa7.2□□□□□ -1.26
SHMT2-224ENST00000556737 A0A1B0GVY2 172 aa7.2□□□□□ -1.26
SHMT2-224ENST00000556737 M0R2N4 97 aa7.2□□□□□ -1.26
SHMT2-224ENST00000556737 PPP1R2P9O14990 202 aa7.2□□□□□ -1.26
SHMT2-224ENST00000556737 GATCO43716 136 aaKnown RBP7.2□□□□□ -1.26
SHMT2-224ENST00000556737 SCO1O75880 301 aa7.2□□□□□ -1.26
SHMT2-224ENST00000556737 P01737 135 aa7.2□□□□□ -1.26
SHMT2-224ENST00000556737 TCL1AP56279 114 aa7.2□□□□□ -1.26
SHMT2-224ENST00000556737 ATRAIDQ6UW56 229 aa7.2□□□□□ -1.26
SHMT2-224ENST00000556737 C18orf15Q96N68 181 aa7.2□□□□□ -1.26
SHMT2-224ENST00000556737 RYR1P21817 5038 aa7.2□□□□□ -1.26
SHMT2-224ENST00000556737 SPINK4O60575 86 aa7.19□□□□□ -1.26
SHMT2-224ENST00000556737 SH2D1AO60880 128 aa7.19□□□□□ -1.26
SHMT2-224ENST00000556737 NUDT3O95989 172 aa7.19□□□□□ -1.26
SHMT2-224ENST00000556737 FAM3BP58499 235 aaPredicted RBP7.19□□□□□ -1.26
SHMT2-224ENST00000556737 FAM162BQ5T6X4 162 aa7.19□□□□□ -1.26
SHMT2-224ENST00000556737 Q6AWC8 147 aa7.19□□□□□ -1.26
SHMT2-224ENST00000556737 LINC00336Q6ZUF6 198 aa7.19□□□□□ -1.26
SHMT2-224ENST00000556737 ZNRF2Q8NHG8 242 aa7.19□□□□□ -1.26
SHMT2-224ENST00000556737 ANAPC16Q96DE5 110 aa7.19□□□□□ -1.26
SHMT2-224ENST00000556737 NAGKQ9UJ70 344 aa7.19□□□□□ -1.26
SHMT2-224ENST00000556737 LENEPQ9Y5L5 61 aa7.19□□□□□ -1.26
SHMT2-224ENST00000556737 PCLOQ9Y6V0 5065 aa7.18□□□□□ -1.26
SHMT2-224ENST00000556737 IGHV1OR15-1A0A075B7D0 117 aa7.18□□□□□ -1.26
SHMT2-224ENST00000556737 TRAV26-1A0A087WT03 109 aa7.18□□□□□ -1.26
SHMT2-224ENST00000556737 TMSB15BA0A087X1C1 80 aa7.18□□□□□ -1.26
SHMT2-224ENST00000556737 ORM1P02763 201 aa7.18□□□□□ -1.26
SHMT2-224ENST00000556737 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.18□□□□□ -1.26
SHMT2-224ENST00000556737 NUDT10Q8NFP7 164 aa7.18□□□□□ -1.26
SHMT2-224ENST00000556737 NUDT11Q96G61 164 aa7.18□□□□□ -1.26
SHMT2-224ENST00000556737 MLST8Q9BVC4 326 aa7.18□□□□□ -1.26
SHMT2-224ENST00000556737 CTDSP1Q9GZU7 261 aa7.18□□□□□ -1.26
SHMT2-224ENST00000556737 LINC00588Q9Y4M8 146 aa7.18□□□□□ -1.26
SHMT2-224ENST00000556737 TRGV1A0A0A0MS02 117 aa7.17□□□□□ -1.26
SHMT2-224ENST00000556737 TRAV21A0A0B4J279 112 aa7.17□□□□□ -1.26
SHMT2-224ENST00000556737 A0A0J9YY99 117 aa7.17□□□□□ -1.26
SHMT2-224ENST00000556737 FABP5P3A8MUU1 101 aa7.17□□□□□ -1.26
SHMT2-224ENST00000556737 H3BNG1 76 aa7.17□□□□□ -1.26
SHMT2-224ENST00000556737 S100PP25815 95 aa7.17□□□□□ -1.26
SHMT2-224ENST00000556737 ZNF80P51504 273 aaPredicted RBP7.17□□□□□ -1.26
SHMT2-224ENST00000556737 MUC21Q5SSG8 566 aa7.17□□□□□ -1.26
SHMT2-224ENST00000556737 CBLN2Q8IUK8 224 aa7.17□□□□□ -1.26
SHMT2-224ENST00000556737 OR2D3Q8NGH3 330 aa7.17□□□□□ -1.26
SHMT2-224ENST00000556737 VSIG2Q96IQ7 327 aa7.17□□□□□ -1.26
SHMT2-224ENST00000556737 RPP21Q9H633 154 aaKnown RBP7.17□□□□□ -1.26
SHMT2-224ENST00000556737 OSTCQ9NRP0 149 aa7.17□□□□□ -1.26
SHMT2-224ENST00000556737 SMCO4Q9NRQ5 59 aa7.17□□□□□ -1.26
SHMT2-224ENST00000556737 MRPL16Q9NX20 251 aaKnown RBP7.17□□□□□ -1.26
SHMT2-224ENST00000556737 URGCP-MRPS24S4R325 110 aa7.17□□□□□ -1.26
SHMT2-224ENST00000556737 TRGV2A0A075B6R0 118 aa7.16□□□□□ -1.26
SHMT2-224ENST00000556737 A0A087WWC5 75 aa7.16□□□□□ -1.26
SHMT2-224ENST00000556737 XKRY2A2RUG3 117 aa7.16□□□□□ -1.26
SHMT2-224ENST00000556737 PFN1P07737 140 aaKnown RBP7.16□□□□□ -1.26
SHMT2-224ENST00000556737 RPL19P84098 196 aaKnown RBP7.16□□□□□ -1.26
SHMT2-224ENST00000556737 ZNF415Q09FC8 603 aa7.16□□□□□ -1.26
SHMT2-224ENST00000556737 KCNIP4Q6PIL6 250 aa7.16□□□□□ -1.26
SHMT2-224ENST00000556737 FAM231DQ6ZW35 169 aa7.16□□□□□ -1.26
SHMT2-224ENST00000556737 TPPP3Q9BW30 176 aa7.16□□□□□ -1.26
SHMT2-224ENST00000556737 MUC4Q99102 2169 aa7.15□□□□□ -1.26
SHMT2-224ENST00000556737 C19orf71A6NCJ1 209 aa7.15□□□□□ -1.26
SHMT2-224ENST00000556737 PRSS29PA6NIE9 313 aa7.15□□□□□ -1.26
SHMT2-224ENST00000556737 CRIP1P50238 77 aa7.15□□□□□ -1.26
SHMT2-224ENST00000556737 TDRG1Q3Y452 100 aa7.15□□□□□ -1.26
SHMT2-224ENST00000556737 FAM159AQ6UWV7 190 aa7.15□□□□□ -1.26
SHMT2-224ENST00000556737 MDFICQ9P1T7 246 aa7.15□□□□□ -1.26
SHMT2-224ENST00000556737 V9GYV3 84 aa7.15□□□□□ -1.26
SHMT2-224ENST00000556737 A0A096LPF7 62 aa7.14□□□□□ -1.27
SHMT2-224ENST00000556737 NBDYA0A0U1RRE5 68 aa7.14□□□□□ -1.27
SHMT2-224ENST00000556737 A0A1W2PPQ1 181 aa7.14□□□□□ -1.27
SHMT2-224ENST00000556737 GRIFINA4D1Z8 144 aa7.14□□□□□ -1.27
SHMT2-224ENST00000556737 A8MWL6 223 aa7.14□□□□□ -1.27
SHMT2-224ENST00000556737 GZMBP10144 247 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 224.3 ms