RNA–Protein interactions for RNA: ENST00000556689.5

SHMT2-223, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-223ENST00000556689 EIF5A2Q9GZV4 153 aaKnown RBP8.5□□□□□ -1.05
SHMT2-223ENST00000556689 SFTA3P0C7M3 94 aa8.49□□□□□ -1.05
SHMT2-223ENST00000556689 PRR9Q5T870 116 aa8.49□□□□□ -1.05
SHMT2-223ENST00000556689 Q8N814 137 aa8.49□□□□□ -1.05
SHMT2-223ENST00000556689 SUN5Q8TC36 379 aa8.49□□□□□ -1.05
SHMT2-223ENST00000556689 FXYD5Q96DB9 178 aa8.49□□□□□ -1.05
SHMT2-223ENST00000556689 ZNF479Q96JC4 524 aa8.49□□□□□ -1.05
SHMT2-223ENST00000556689 FAM167A-AS1Q96KT0 104 aa8.49□□□□□ -1.05
SHMT2-223ENST00000556689 FAM30AQ9NZY2 134 aa8.49□□□□□ -1.05
SHMT2-223ENST00000556689 ZNF492Q9P255 531 aa8.49□□□□□ -1.05
SHMT2-223ENST00000556689 DNAH8Q96JB1 4490 aa8.48□□□□□ -1.05
SHMT2-223ENST00000556689 IGKV2-40A0A087WW87 121 aaPredicted RBP8.48□□□□□ -1.05
SHMT2-223ENST00000556689 A0A1W2PRE2 83 aa8.48□□□□□ -1.05
SHMT2-223ENST00000556689 F6UZH7 168 aa8.48□□□□□ -1.05
SHMT2-223ENST00000556689 IGKV2D-40P01614 121 aaPredicted RBP8.48□□□□□ -1.05
SHMT2-223ENST00000556689 BCL2P10415 239 aa8.48□□□□□ -1.05
SHMT2-223ENST00000556689 UBE2G2P60604 165 aa8.48□□□□□ -1.05
SHMT2-223ENST00000556689 SERTAD4-AS1Q5TG53 156 aa8.48□□□□□ -1.05
SHMT2-223ENST00000556689 RASL10AQ92737 203 aa8.48□□□□□ -1.05
SHMT2-223ENST00000556689 OTORQ9NRC9 128 aa8.48□□□□□ -1.05
SHMT2-223ENST00000556689 VAX2Q9UIW0 290 aa8.48□□□□□ -1.05
SHMT2-223ENST00000556689 IGHV3-38A0A0C4DH36 116 aa8.47□□□□□ -1.05
SHMT2-223ENST00000556689 IBA57-AS1B1ANH7 110 aa8.47□□□□□ -1.05
SHMT2-223ENST00000556689 C9JCJ5 164 aa8.47□□□□□ -1.05
SHMT2-223ENST00000556689 PDE6DO43924 150 aa8.47□□□□□ -1.05
SHMT2-223ENST00000556689 EIF3GO75821 320 aaKnown RBP eCLIP8.47□□□□□ -1.05
SHMT2-223ENST00000556689 RANP62826 216 aaKnown RBP8.47□□□□□ -1.05
SHMT2-223ENST00000556689 MEF2BQ02080 365 aaPredicted RBP8.47□□□□□ -1.05
SHMT2-223ENST00000556689 PEA15Q15121 130 aa8.47□□□□□ -1.05
SHMT2-223ENST00000556689 NDUFA5Q16718 116 aa8.47□□□□□ -1.05
SHMT2-223ENST00000556689 SH2D6Q7Z4S9 175 aa8.47□□□□□ -1.05
SHMT2-223ENST00000556689 C5orf17Q8NAS9 161 aa8.47□□□□□ -1.05
SHMT2-223ENST00000556689 DEFB104AQ8WTQ1 72 aa8.47□□□□□ -1.05
SHMT2-223ENST00000556689 TRBV7-9A0A0J9YWB2 115 aa8.46□□□□□ -1.06
SHMT2-223ENST00000556689 SERTM2A0A1B0GWG4 89 aa8.46□□□□□ -1.06
SHMT2-223ENST00000556689 RBFOX3A6NFN3 312 aa8.46□□□□□ -1.06
SHMT2-223ENST00000556689 PAGE4O60829 102 aa8.46□□□□□ -1.06
SHMT2-223ENST00000556689 ZNF138P52744 262 aa8.46□□□□□ -1.06
SHMT2-223ENST00000556689 TOR2AQ5JU69 321 aa8.46□□□□□ -1.06
SHMT2-223ENST00000556689 MUC21Q5SSG8 566 aa8.46□□□□□ -1.06
SHMT2-223ENST00000556689 LYPD6BQ8NI32 183 aa8.46□□□□□ -1.06
SHMT2-223ENST00000556689 FAM210AQ96ND0 272 aa8.46□□□□□ -1.06
SHMT2-223ENST00000556689 SPXQ9BT56 116 aa8.46□□□□□ -1.06
SHMT2-223ENST00000556689 SMDT1Q9H4I9 107 aa8.46□□□□□ -1.06
SHMT2-223ENST00000556689 RPH3ALQ9UNE2 315 aa8.46□□□□□ -1.06
SHMT2-223ENST00000556689 FAM74A7A6NL05 159 aa8.45□□□□□ -1.06
SHMT2-223ENST00000556689 TIRAPP58753 221 aa8.45□□□□□ -1.06
SHMT2-223ENST00000556689 LINC01556Q5JQF7 62 aa8.45□□□□□ -1.06
SHMT2-223ENST00000556689 COMMD7Q86VX2 200 aa8.45□□□□□ -1.06
SHMT2-223ENST00000556689 SYT8Q8NBV8 401 aa8.45□□□□□ -1.06
SHMT2-223ENST00000556689 TRAV4A0A0B4J268 109 aa8.44□□□□□ -1.06
SHMT2-223ENST00000556689 RAB19A4D1S5 217 aa8.44□□□□□ -1.06
SHMT2-223ENST00000556689 PGPA6NDG6 321 aa8.44□□□□□ -1.06
SHMT2-223ENST00000556689 FBLL1A6NHQ2 334 aaKnown RBP8.44□□□□□ -1.06
SHMT2-223ENST00000556689 TMEM183BQ1AE95 376 aa8.44□□□□□ -1.06
SHMT2-223ENST00000556689 ZNF506Q5JVG8 444 aa8.44□□□□□ -1.06
SHMT2-223ENST00000556689 UQCC3Q6UW78 93 aa8.44□□□□□ -1.06
SHMT2-223ENST00000556689 FAM159AQ6UWV7 190 aa8.44□□□□□ -1.06
SHMT2-223ENST00000556689 TMEM183AQ8IXX5 376 aa8.44□□□□□ -1.06
SHMT2-223ENST00000556689 LINC00528Q8N1L1 170 aa8.44□□□□□ -1.06
SHMT2-223ENST00000556689 ARL6IP6Q8N6S5 226 aa8.44□□□□□ -1.06
SHMT2-223ENST00000556689 NHLRC2Q8NBF2 726 aa8.44□□□□□ -1.06
SHMT2-223ENST00000556689 OR4C5Q8NGB2 326 aa8.44□□□□□ -1.06
SHMT2-223ENST00000556689 HIST1H2BAQ96A08 127 aa8.44□□□□□ -1.06
SHMT2-223ENST00000556689 Q9HAA7 133 aa8.44□□□□□ -1.06
SHMT2-223ENST00000556689 TREM1Q9NP99 234 aa8.44□□□□□ -1.06
SHMT2-223ENST00000556689 MED9Q9NWA0 146 aa8.44□□□□□ -1.06
SHMT2-223ENST00000556689 UBR4Q5T4S7 5183 aa8.43□□□□□ -1.06
SHMT2-223ENST00000556689 TRGV11A0A075B6L2 103 aa8.43□□□□□ -1.06
SHMT2-223ENST00000556689 TRAV8-6A0A0B4J262 113 aa8.43□□□□□ -1.06
SHMT2-223ENST00000556689 LOC100131303A0A0U1RQF7 123 aa8.43□□□□□ -1.06
SHMT2-223ENST00000556689 AKR1C3P42330 323 aa8.43□□□□□ -1.06
SHMT2-223ENST00000556689 UBE2G1P62253 170 aa8.43□□□□□ -1.06
SHMT2-223ENST00000556689 SUMO1P63165 101 aaKnown RBP8.43□□□□□ -1.06
SHMT2-223ENST00000556689 CYB561D1Q8N8Q1 229 aa8.43□□□□□ -1.06
SHMT2-223ENST00000556689 Q8TAT8 98 aa8.43□□□□□ -1.06
SHMT2-223ENST00000556689 NDFIP1Q9BT67 221 aa8.43□□□□□ -1.06
SHMT2-223ENST00000556689 HMCN2Q8NDA2 5059 aa8.43□□□□□ -1.06
SHMT2-223ENST00000556689 GGTLC3B5MD39 225 aa8.42□□□□□ -1.06
SHMT2-223ENST00000556689 TMEM250H0YL14 139 aa8.42□□□□□ -1.06
SHMT2-223ENST00000556689 PEX7O00628 323 aa8.42□□□□□ -1.06
SHMT2-223ENST00000556689 NDUFS6O75380 124 aaKnown RBP8.42□□□□□ -1.06
SHMT2-223ENST00000556689 S100A9P06702 114 aaKnown RBP8.42□□□□□ -1.06
SHMT2-223ENST00000556689 PFN1P07737 140 aaKnown RBP8.42□□□□□ -1.06
SHMT2-223ENST00000556689 CEBPGP53567 150 aa8.42□□□□□ -1.06
SHMT2-223ENST00000556689 CCL20P78556 96 aa8.42□□□□□ -1.06
SHMT2-223ENST00000556689 OR10J3Q5JRS4 329 aa8.42□□□□□ -1.06
SHMT2-223ENST00000556689 Q6ZSA8 131 aa8.42□□□□□ -1.06
SHMT2-223ENST00000556689 RBAKDNA6NC62 111 aa8.41□□□□□ -1.06
SHMT2-223ENST00000556689 LINC00862A6NCI5 91 aa8.41□□□□□ -1.06
SHMT2-223ENST00000556689 M0R2P5 195 aa8.41□□□□□ -1.06
SHMT2-223ENST00000556689 Q6AWC8 147 aa8.41□□□□□ -1.06
SHMT2-223ENST00000556689 FMC1Q96HJ9 113 aa8.41□□□□□ -1.06
SHMT2-223ENST00000556689 TM2D2Q9BX73 214 aa8.41□□□□□ -1.06
SHMT2-223ENST00000556689 IGHV3-16A0A0C4DH30 117 aa8.4□□□□□ -1.06
SHMT2-223ENST00000556689 GNRH2O43555 120 aa8.4□□□□□ -1.06
SHMT2-223ENST00000556689 IGHV3-30P01768 117 aa8.4□□□□□ -1.06
SHMT2-223ENST00000556689 IGHV3-33P01772 117 aa8.4□□□□□ -1.06
SHMT2-223ENST00000556689 TCRAP04437 139 aa8.4□□□□□ -1.06
SHMT2-223ENST00000556689 IGHV3-30-3P0DP02 117 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms