RNA–Protein interactions for RNA: ENST00000556622.1

CPSF2-205, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 5

Gene CPSF2, Length 469 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-205ENST00000556622 SGK494Q96LW2 274 aa4.7□□□□□ -1.66
CPSF2-205ENST00000556622 C20orf78Q9BR46 151 aa4.7□□□□□ -1.66
CPSF2-205ENST00000556622 BPESC1Q9GZL8 116 aa4.7□□□□□ -1.66
CPSF2-205ENST00000556622 SIGLEC8Q9NYZ4 499 aa4.7□□□□□ -1.66
CPSF2-205ENST00000556622 HIGD1BQ9P298 99 aa4.7□□□□□ -1.66
CPSF2-205ENST00000556622 MOB4Q9Y3A3 225 aa4.7□□□□□ -1.66
CPSF2-205ENST00000556622 CR1P17927 2039 aa4.7□□□□□ -1.66
CPSF2-205ENST00000556622 IGHV7-81A0A0B4J1V7 117 aa4.69□□□□□ -1.66
CPSF2-205ENST00000556622 TRAV21A0A0B4J279 112 aa4.69□□□□□ -1.66
CPSF2-205ENST00000556622 GAGE10A6NGK3 116 aa4.69□□□□□ -1.66
CPSF2-205ENST00000556622 LINC01548A6NM66 108 aa4.69□□□□□ -1.66
CPSF2-205ENST00000556622 NDUFA4O00483 81 aa4.69□□□□□ -1.66
CPSF2-205ENST00000556622 IGHV4-31P0DP07 118 aa4.69□□□□□ -1.66
CPSF2-205ENST00000556622 IFI27P40305 119 aaPredicted RBP4.69□□□□□ -1.66
CPSF2-205ENST00000556622 ID1P41134 155 aa4.69□□□□□ -1.66
CPSF2-205ENST00000556622 CRIP2P52943 208 aaPredicted RBP4.69□□□□□ -1.66
CPSF2-205ENST00000556622 PAX8Q06710 450 aa4.69□□□□□ -1.66
CPSF2-205ENST00000556622 LAGE3Q14657 143 aa4.69□□□□□ -1.66
CPSF2-205ENST00000556622 MRPL51Q4U2R6 128 aaKnown RBP4.69□□□□□ -1.66
CPSF2-205ENST00000556622 MPV17L2Q567V2 206 aa4.69□□□□□ -1.66
CPSF2-205ENST00000556622 FAM120AOSQ5T036 256 aa4.69□□□□□ -1.66
CPSF2-205ENST00000556622 SPANXN1Q5VSR9 72 aa4.69□□□□□ -1.66
CPSF2-205ENST00000556622 SUMO4Q6EEV6 95 aa4.69□□□□□ -1.66
CPSF2-205ENST00000556622 ATOH7Q8N100 152 aa4.69□□□□□ -1.66
CPSF2-205ENST00000556622 Q8N9W7 124 aa4.69□□□□□ -1.66
CPSF2-205ENST00000556622 OR8A1Q8NGG7 326 aa4.69□□□□□ -1.66
CPSF2-205ENST00000556622 SIRPDQ9H106 197 aa4.69□□□□□ -1.66
CPSF2-205ENST00000556622 ZNF580Q9UK33 172 aa4.69□□□□□ -1.66
CPSF2-205ENST00000556622 AKAP9Q99996 3911 aa4.68□□□□□ -1.66
CPSF2-205ENST00000556622 MALRD1Q5VYJ5 2156 aa4.68□□□□□ -1.66
CPSF2-205ENST00000556622 A0A096LNT2 108 aa4.68□□□□□ -1.66
CPSF2-205ENST00000556622 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.68□□□□□ -1.66
CPSF2-205ENST00000556622 H3BTX0 84 aa4.68□□□□□ -1.66
CPSF2-205ENST00000556622 M0R381 172 aa4.68□□□□□ -1.66
CPSF2-205ENST00000556622 NPFFO15130 113 aa4.68□□□□□ -1.66
CPSF2-205ENST00000556622 CRLF1O75462 422 aa4.68□□□□□ -1.66
CPSF2-205ENST00000556622 DPM2O94777 84 aa4.68□□□□□ -1.66
CPSF2-205ENST00000556622 IGKCP01834 107 aa4.68□□□□□ -1.66
CPSF2-205ENST00000556622 NPSP0C0P6 89 aa4.68□□□□□ -1.66
CPSF2-205ENST00000556622 SMIM13P0DJ93 91 aa4.68□□□□□ -1.66
CPSF2-205ENST00000556622 EVI2AP22794 236 aa4.68□□□□□ -1.66
CPSF2-205ENST00000556622 CDKN1BP46527 198 aa4.68□□□□□ -1.66
CPSF2-205ENST00000556622 CRIP1P50238 77 aa4.68□□□□□ -1.66
CPSF2-205ENST00000556622 TIRAPP58753 221 aa4.68□□□□□ -1.66
CPSF2-205ENST00000556622 LYRM7Q5U5X0 104 aa4.68□□□□□ -1.66
CPSF2-205ENST00000556622 URB1-AS1Q96HZ7 61 aa4.68□□□□□ -1.66
CPSF2-205ENST00000556622 SONP18583 2426 aaKnown RBP4.68□□□□□ -1.66
CPSF2-205ENST00000556622 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.68□□□□□ -1.66
CPSF2-205ENST00000556622 TNCP24821 2201 aa4.68□□□□□ -1.66
CPSF2-205ENST00000556622 NIPBLQ6KC79 2804 aaeCLIP4.68□□□□□ -1.66
CPSF2-205ENST00000556622 ABCA2Q9BZC7 2435 aa4.67□□□□□ -1.66
CPSF2-205ENST00000556622 WNK2Q9Y3S1 2297 aa4.67□□□□□ -1.66
CPSF2-205ENST00000556622 ZNF469Q96JG9 3925 aaPredicted RBP4.67□□□□□ -1.66
CPSF2-205ENST00000556622 TRAV12-1A0A0B4J245 112 aa4.67□□□□□ -1.66
CPSF2-205ENST00000556622 TRAV41A0A0B4J266 112 aa4.67□□□□□ -1.66
CPSF2-205ENST00000556622 CENPVL3A0A0U1RRI6 287 aa4.67□□□□□ -1.66
CPSF2-205ENST00000556622 LOC389332A0A1B0GUA5 103 aa4.67□□□□□ -1.66
CPSF2-205ENST00000556622 hDV102S1A0JD36 115 aa4.67□□□□□ -1.66
CPSF2-205ENST00000556622 TMEM89A2RUT3 159 aa4.67□□□□□ -1.66
CPSF2-205ENST00000556622 B4DSR2 109 aa4.67□□□□□ -1.66
CPSF2-205ENST00000556622 H0Y8G0 127 aa4.67□□□□□ -1.66
CPSF2-205ENST00000556622 M0QZ24 198 aa4.67□□□□□ -1.66
CPSF2-205ENST00000556622 M0R3E3 92 aa4.67□□□□□ -1.66
CPSF2-205ENST00000556622 TNFRSF6BO95407 300 aa4.67□□□□□ -1.66
CPSF2-205ENST00000556622 IGF1P05019 195 aa4.67□□□□□ -1.66
CPSF2-205ENST00000556622 SMIM17P0DL12 118 aa4.67□□□□□ -1.66
CPSF2-205ENST00000556622 FABP2P12104 132 aa4.67□□□□□ -1.66
CPSF2-205ENST00000556622 S100A4P26447 101 aaKnown RBP4.67□□□□□ -1.66
CPSF2-205ENST00000556622 LEPP41159 167 aa4.67□□□□□ -1.66
CPSF2-205ENST00000556622 TFPI2P48307 235 aa4.67□□□□□ -1.66
CPSF2-205ENST00000556622 FAM106AQ4KMX7 169 aa4.67□□□□□ -1.66
CPSF2-205ENST00000556622 KLF17Q5JT82 389 aaPredicted RBP4.67□□□□□ -1.66
CPSF2-205ENST00000556622 IL17RELQ6ZVW7 336 aa4.67□□□□□ -1.66
CPSF2-205ENST00000556622 LHFPL4Q7Z7J7 247 aa4.67□□□□□ -1.66
CPSF2-205ENST00000556622 OR2K2Q8NGT1 345 aa4.67□□□□□ -1.66
CPSF2-205ENST00000556622 C17orf77Q96MU5 243 aa4.67□□□□□ -1.66
CPSF2-205ENST00000556622 TIMM8BQ9Y5J9 83 aaPredicted RBP4.67□□□□□ -1.66
CPSF2-205ENST00000556622 JMJD1CQ15652 2540 aa4.67□□□□□ -1.66
CPSF2-205ENST00000556622 FN1P02751 2386 aaKnown RBP4.67□□□□□ -1.66
CPSF2-205ENST00000556622 VPS13CQ709C8 3753 aa4.66□□□□□ -1.66
CPSF2-205ENST00000556622 IGKV2-40A0A087WW87 121 aaPredicted RBP4.66□□□□□ -1.66
CPSF2-205ENST00000556622 LINC01619G3V211 115 aa4.66□□□□□ -1.66
CPSF2-205ENST00000556622 H7C1H1 209 aa4.66□□□□□ -1.66
CPSF2-205ENST00000556622 K7EMT4 169 aa4.66□□□□□ -1.66
CPSF2-205ENST00000556622 SNAI2O43623 268 aa4.66□□□□□ -1.66
CPSF2-205ENST00000556622 IGKV2D-40P01614 121 aaPredicted RBP4.66□□□□□ -1.66
CPSF2-205ENST00000556622 SAA4P35542 130 aa4.66□□□□□ -1.66
CPSF2-205ENST00000556622 ARL3P36405 182 aa4.66□□□□□ -1.66
CPSF2-205ENST00000556622 ASIPP42127 132 aa4.66□□□□□ -1.66
CPSF2-205ENST00000556622 HERVK_113P61574 105 aa4.66□□□□□ -1.66
CPSF2-205ENST00000556622 LMO4P61968 165 aa4.66□□□□□ -1.66
CPSF2-205ENST00000556622 RPL32P62910 135 aaKnown RBP4.66□□□□□ -1.66
CPSF2-205ENST00000556622 ECSCRQ19T08 205 aa4.66□□□□□ -1.66
CPSF2-205ENST00000556622 ASPHD1Q5U4P2 390 aa4.66□□□□□ -1.66
CPSF2-205ENST00000556622 CLEC19AQ6UXS0 136 aa4.66□□□□□ -1.66
CPSF2-205ENST00000556622 DPH3P1Q9H4G8 78 aa4.66□□□□□ -1.66
CPSF2-205ENST00000556622 ARHGAP32A7KAX9 2087 aa4.66□□□□□ -1.66
CPSF2-205ENST00000556622 ZANQ9Y493 2812 aa4.65□□□□□ -1.66
CPSF2-205ENST00000556622 TMSB15BA0A087X1C1 80 aa4.65□□□□□ -1.67
CPSF2-205ENST00000556622 IGHV1-69DA0A0B4J2H0 117 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms