RNA–Protein interactions for RNA: ENST00000556445.1

SRP54-211, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 530 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-211ENST00000556445 IGHV3OR16-9A0A0B4J2B5 98 aa3.77□□□□□ -1.81
SRP54-211ENST00000556445 ZNF705GA8MUZ8 300 aaPredicted RBP3.77□□□□□ -1.81
SRP54-211ENST00000556445 A8MWL6 223 aa3.77□□□□□ -1.81
SRP54-211ENST00000556445 TSTD3H0UI37 97 aa3.77□□□□□ -1.81
SRP54-211ENST00000556445 NDUFA4O00483 81 aa3.77□□□□□ -1.81
SRP54-211ENST00000556445 TRGC2P03986 189 aa3.77□□□□□ -1.81
SRP54-211ENST00000556445 IGLC2P0DOY2 106 aa3.77□□□□□ -1.81
SRP54-211ENST00000556445 CACNG7P62955 275 aa3.77□□□□□ -1.81
SRP54-211ENST00000556445 TTC32Q5I0X7 151 aa3.77□□□□□ -1.81
SRP54-211ENST00000556445 CLEC19AQ6UXS0 136 aa3.77□□□□□ -1.81
SRP54-211ENST00000556445 NOTCH2NLQ7Z3S9 236 aa3.77□□□□□ -1.81
SRP54-211ENST00000556445 TMEM183AQ8IXX5 376 aa3.77□□□□□ -1.81
SRP54-211ENST00000556445 SMIM20Q8N5G0 67 aa3.77□□□□□ -1.81
SRP54-211ENST00000556445 TMEM75Q8N9X5 138 aa3.77□□□□□ -1.81
SRP54-211ENST00000556445 C11orf72Q8NBR9 251 aa3.77□□□□□ -1.81
SRP54-211ENST00000556445 ZNF414Q96IQ9 312 aa3.77□□□□□ -1.81
SRP54-211ENST00000556445 ZNF586Q9NXT0 402 aa3.77□□□□□ -1.81
SRP54-211ENST00000556445 ZNF492Q9P255 531 aa3.77□□□□□ -1.81
SRP54-211ENST00000556445 UFC1Q9Y3C8 167 aa3.77□□□□□ -1.81
SRP54-211ENST00000556445 V9GYV3 84 aa3.77□□□□□ -1.81
SRP54-211ENST00000556445 ZFHX4Q86UP3 3567 aa3.77□□□□□ -1.81
SRP54-211ENST00000556445 ATMQ13315 3056 aa3.76□□□□□ -1.81
SRP54-211ENST00000556445 IGHV1OR15-1A0A075B7D0 117 aa3.76□□□□□ -1.81
SRP54-211ENST00000556445 A0A087WW49 117 aa3.76□□□□□ -1.81
SRP54-211ENST00000556445 SMIM27A0A1W2PRY6 76 aa3.76□□□□□ -1.81
SRP54-211ENST00000556445 RBAKDNA6NC62 111 aa3.76□□□□□ -1.81
SRP54-211ENST00000556445 IZUMO1RA6ND01 250 aa3.76□□□□□ -1.81
SRP54-211ENST00000556445 G3V318 75 aa3.76□□□□□ -1.81
SRP54-211ENST00000556445 H0Y9J4 135 aa3.76□□□□□ -1.81
SRP54-211ENST00000556445 TCAPO15273 167 aa3.76□□□□□ -1.81
SRP54-211ENST00000556445 HIST1H2BKO60814 126 aa3.76□□□□□ -1.81
SRP54-211ENST00000556445 LTAP01374 205 aa3.76□□□□□ -1.81
SRP54-211ENST00000556445 IGLV2-8P01709 118 aa3.76□□□□□ -1.81
SRP54-211ENST00000556445 HLA-DQA1P01909 254 aa3.76□□□□□ -1.81
SRP54-211ENST00000556445 HIST1H2BJP06899 126 aa3.76□□□□□ -1.81
SRP54-211ENST00000556445 HIST1H2BOP23527 126 aa3.76□□□□□ -1.81
SRP54-211ENST00000556445 S100A2P29034 98 aa3.76□□□□□ -1.81
SRP54-211ENST00000556445 HIST1H2BBP33778 126 aa3.76□□□□□ -1.81
SRP54-211ENST00000556445 AKR1D1P51857 326 aa3.76□□□□□ -1.81
SRP54-211ENST00000556445 NDUFV3P56181 108 aaKnown RBP3.76□□□□□ -1.81
SRP54-211ENST00000556445 NDUFA6P56556 154 aa3.76□□□□□ -1.81
SRP54-211ENST00000556445 HIST1H2BDP58876 126 aa3.76□□□□□ -1.81
SRP54-211ENST00000556445 TPPP2P59282 170 aa3.76□□□□□ -1.81
SRP54-211ENST00000556445 HIST1H2BCP62807 126 aa3.76□□□□□ -1.81
SRP54-211ENST00000556445 FABP9Q0Z7S8 132 aa3.76□□□□□ -1.81
SRP54-211ENST00000556445 LY6EQ16553 131 aa3.76□□□□□ -1.81
SRP54-211ENST00000556445 HIST2H2BEQ16778 126 aa3.76□□□□□ -1.81
SRP54-211ENST00000556445 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.76□□□□□ -1.81
SRP54-211ENST00000556445 LCE1FQ5T754 118 aa3.76□□□□□ -1.81
SRP54-211ENST00000556445 SAMD13Q5VXD3 122 aa3.76□□□□□ -1.81
SRP54-211ENST00000556445 LEMD1Q68G75 181 aa3.76□□□□□ -1.81
SRP54-211ENST00000556445 Q6AWC8 147 aa3.76□□□□□ -1.81
SRP54-211ENST00000556445 TOMM20LQ6UXN7 152 aa3.76□□□□□ -1.81
SRP54-211ENST00000556445 ATP5L2Q7Z4Y8 100 aa3.76□□□□□ -1.81
SRP54-211ENST00000556445 TSKUQ8WUA8 353 aa3.76□□□□□ -1.81
SRP54-211ENST00000556445 HIST1H2BHQ93079 126 aa3.76□□□□□ -1.81
SRP54-211ENST00000556445 HIST1H2BNQ99877 126 aa3.76□□□□□ -1.81
SRP54-211ENST00000556445 HIST1H2BMQ99879 126 aa3.76□□□□□ -1.81
SRP54-211ENST00000556445 NDFIP1Q9BT67 221 aa3.76□□□□□ -1.81
SRP54-211ENST00000556445 GNB1LQ9BYB4 327 aa3.76□□□□□ -1.81
SRP54-211ENST00000556445 GFRA4Q9GZZ7 299 aa3.76□□□□□ -1.81
SRP54-211ENST00000556445 GNB4Q9HAV0 340 aa3.76□□□□□ -1.81
SRP54-211ENST00000556445 SCRT2Q9NQ03 307 aa3.76□□□□□ -1.81
SRP54-211ENST00000556445 ZNF331Q9NQX6 463 aaPredicted RBP3.76□□□□□ -1.81
SRP54-211ENST00000556445 TRAPPC1Q9Y5R8 145 aa3.76□□□□□ -1.81
SRP54-211ENST00000556445 USP24Q9UPU5 2620 aa3.76□□□□□ -1.81
SRP54-211ENST00000556445 PRRC2AP48634 2157 aaKnown RBP3.76□□□□□ -1.81
SRP54-211ENST00000556445 A0A1B0GXF2 115 aa3.75□□□□□ -1.81
SRP54-211ENST00000556445 CRYGDP07320 174 aa3.75□□□□□ -1.81
SRP54-211ENST00000556445 TRGC1P0CF51 173 aa3.75□□□□□ -1.81
SRP54-211ENST00000556445 SMIM6P0DI80 62 aa3.75□□□□□ -1.81
SRP54-211ENST00000556445 ESDP10768 282 aa3.75□□□□□ -1.81
SRP54-211ENST00000556445 RPS20P60866 119 aaKnown RBP3.75□□□□□ -1.81
SRP54-211ENST00000556445 GNG5P63218 68 aa3.75□□□□□ -1.81
SRP54-211ENST00000556445 DEFB112Q30KQ8 113 aa3.75□□□□□ -1.81
SRP54-211ENST00000556445 COA6Q5JTJ3 125 aaKnown RBP3.75□□□□□ -1.81
SRP54-211ENST00000556445 FAM162BQ5T6X4 162 aa3.75□□□□□ -1.81
SRP54-211ENST00000556445 GOLT1AQ6ZVE7 132 aa3.75□□□□□ -1.81
SRP54-211ENST00000556445 Q86TA4 180 aa3.75□□□□□ -1.81
SRP54-211ENST00000556445 FRZBQ92765 325 aa3.75□□□□□ -1.81
SRP54-211ENST00000556445 RPP21Q9H633 154 aaKnown RBP3.75□□□□□ -1.81
SRP54-211ENST00000556445 NAT8BQ9UHF3 227 aa3.75□□□□□ -1.81
SRP54-211ENST00000556445 PSG8Q9UQ74 426 aa3.75□□□□□ -1.81
SRP54-211ENST00000556445 S4R3C0 116 aa3.75□□□□□ -1.81
SRP54-211ENST00000556445 DCHS1Q96JQ0 3298 aa3.75□□□□□ -1.81
SRP54-211ENST00000556445 FAM208BQ5VWN6 2430 aa3.75□□□□□ -1.81
SRP54-211ENST00000556445 ABCA2Q9BZC7 2435 aa3.75□□□□□ -1.81
SRP54-211ENST00000556445 IGSF10Q6WRI0 2623 aa3.74□□□□□ -1.81
SRP54-211ENST00000556445 BOD1L1Q8NFC6 3051 aa3.74□□□□□ -1.81
SRP54-211ENST00000556445 SPG11Q96JI7 2443 aa3.74□□□□□ -1.81
SRP54-211ENST00000556445 A0A0U1RQV1 116 aa3.74□□□□□ -1.81
SRP54-211ENST00000556445 C19orf71A6NCJ1 209 aa3.74□□□□□ -1.81
SRP54-211ENST00000556445 SMIM1B2RUZ4 78 aa3.74□□□□□ -1.81
SRP54-211ENST00000556445 SLC17A3O00476 420 aa3.74□□□□□ -1.81
SRP54-211ENST00000556445 IGHV3-23P01764 117 aa3.74□□□□□ -1.81
SRP54-211ENST00000556445 CTRLP40313 264 aa3.74□□□□□ -1.81
SRP54-211ENST00000556445 TEX43Q6ZNM6 134 aa3.74□□□□□ -1.81
SRP54-211ENST00000556445 PRNTQ86SH4 94 aa3.74□□□□□ -1.81
SRP54-211ENST00000556445 C1orf158Q8N1D5 194 aa3.74□□□□□ -1.81
SRP54-211ENST00000556445 EXOC3-AS1Q8N2X6 119 aa3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms